Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007144g0010 Nicotiana tabacum HOM05D005229 ORTHO05D006378 4.6e-42 174.1 85 100.0
Nitab4.5_0001348g0080 Nicotiana tabacum HOM05D005229 ORTHO05D006378 1.0e-20 103.2 58 94.8
CAN.G874.39 Capsicum annuum HOM05D005229 ORTHO05D006378 6.5e-20 100.5 58 93.1
CAN.G874.38 Capsicum annuum HOM05D005229 ORTHO05D006378 8.4e-20 100.1 58 93.1
Nitab4.5_0014403g0020 Nicotiana tabacum HOM05D005229 ORTHO05D006378 1.9e-19 99.0 58 93.1
PGSC0003DMG400027671 Solanum tuberosum HOM05D005229 ORTHO05D006378 2.5e-19 98.6 58 91.4
PGSC0003DMG400027672 Solanum tuberosum HOM05D005229 ORTHO05D006378 3.2e-19 98.2 58 91.4
Sopen06g034330 Solanum pennellii HOM05D005229 ORTHO05D006378 5.5e-19 97.4 58 91.4
Solyc06g082940.3 Solanum lycopersicum HOM05D005229 ORTHO05D006378 7.1e-19 97.1 58 91.4
Sopen06g034340 Solanum pennellii HOM05D005229 ORTHO05D006378 7.1e-19 97.1 58 89.7
Peaxi162Scf01242g00025 Petunia axillaris HOM05D005229 ORTHO05D006378 2.7e-18 95.1 58 93.1
Solyc06g082950.4 Solanum lycopersicum HOM05D005229 ORTHO05D006378 4.6e-18 94.4 58 87.9
Peaxi162Scf00841g00210 Petunia axillaris HOM05D005229 ORTHO05D006378 1.4e-14 82.8 58 77.6
Oeu025298.1 Olea europaea HOM05D005229 ORTHO05D006378 6.9e-14 80.5 58 79.3
Cc01_g15890 Coffea canephora HOM05D005229 ORTHO05D006378 2.0e-13 79.0 58 74.1
Oeu013526.1 Olea europaea HOM05D005229 ORTHO05D006378 2.0e-13 79.0 58 75.9
Dinv28794 Davidia involucrata HOM05D005229 ORTHO05D006378 2.6e-13 78.6 55 72.7
HanXRQChr12g0363961 Helianthus annuus HOM05D005229 ORTHO05D006378 3.8e-12 74.7 58 75.9
MSTRG.17960 Avicennia marina HOM05D005229 ORTHO05D006378 5.0e-12 74.3 60 70.0
ECA236G3288 Erigeron canadensis HOM05D005229 ORTHO05D006378 5.0e-12 74.3 58 72.4
unitig_60.g25573 Utricularia gibba HOM05D005229 ORTHO05D006378 6.5e-12 73.9 58 74.1
DCAR_018610 Daucus carota HOM05D005229 ORTHO05D006378 1.1e-11 73.2 55 72.7
TAR365G0963 Trochodendron aralioides HOM05D005229 ORTHO05D006378 1.1e-11 73.2 55 70.9
Lsat_1_v5_gn_8_98481 Lactuca sativa HOM05D005229 ORTHO05D006378 1.4e-11 72.8 58 74.1
Nn1g09761 Nelumbo nucifera HOM05D005229 ORTHO05D006378 1.4e-11 72.8 55 67.3
Migut.D00776 Erythranthe guttata HOM05D005229 ORTHO05D006378 5.5e-11 70.9 59 64.4
MSTRG.12743 Avicennia marina HOM05D005229 ORTHO05D006378 2.7e-10 68.6 58 70.7
DCAR_012704 Daucus carota HOM05D005229 ORTHO05D006378 2.7e-10 68.6 58 60.3
Thecc.01G207800 Theobroma cacao HOM05D005229 ORTHO05D006378 3.6e-10 68.2 55 63.6
Cpa.g.sc8.42 Carica papaya HOM05D005229 ORTHO05D006378 4.6e-10 67.8 55 65.5
Rhsim01G0247800 Rhododendron simsii HOM05D005229 ORTHO05D006378 4.6e-10 67.8 57 61.4
vmacro14690 Vaccinium macrocarpon HOM05D005229 ORTHO05D006378 1.4e-09 66.2 58 62.1
SalBow3G3798 Salvia bowleyana HOM05D005229 ORTHO05D006378 1.8e-09 65.9 56 64.3
Gohir.D07G168100 Gossypium hirsutum HOM05D005229 ORTHO05D006378 3.9e-09 64.7 61 63.9
unitig_0.g420 Utricularia gibba HOM05D005229 ORTHO05D006378 3.9e-09 64.7 59 71.2
COL.COLO4_07353 Corchorus olitorius HOM05D005229 ORTHO05D006378 5.1e-09 64.3 56 62.5
Gohir.A07G160500 Gossypium hirsutum HOM05D005229 ORTHO05D006378 5.1e-09 64.3 61 63.9
Gorai.N002100 Gossypium raimondii HOM05D005229 ORTHO05D006378 5.1e-09 64.3 59 66.1
MBI07_g06134_MAGBIO Magnolia biondii HOM05D005229 ORTHO05D006378 1.1e-08 63.2 58 55.2
MD12G1260300 Malus domestica HOM05D005229 ORTHO05D006378 1.5e-08 62.8 57 54.4
FAN05G0704 Fragaria x ananassa HOM05D005229 ORTHO05D006378 1.9e-08 62.4 55 58.2
Gohir.A07G089500 Gossypium hirsutum HOM05D005229 ORTHO05D006378 1.9e-08 62.4 56 66.1
PGR083G1330 Punica granatum HOM05D005229 ORTHO05D006378 1.9e-08 62.4 55 56.4
SGA_v2.0_scaffold29G12061 Striga asiatica HOM05D005229 ORTHO05D006378 2.5e-08 62.0 58 58.6
Aqoxy2G04070 Aquilegia oxysepala HOM05D005229 ORTHO05D006378 3.3e-08 61.6 55 61.8
MD04G1204600 Malus domestica HOM05D000208 ORTHO05D000130 3.3e-08 61.6 57 56.1
FvH4_6g00530 Fragaria vesca HOM05D005229 ORTHO05D006378 5.7e-08 60.8 55 58.2
FAN09G4314 Fragaria x ananassa HOM05D005229 ORTHO05D006378 5.7e-08 60.8 55 58.2
MD04G1244400 Malus domestica HOM05D005229 ORTHO05D006378 5.7e-08 60.8 57 52.6
FAN02G4095 Fragaria x ananassa HOM05D005229 ORTHO05D006378 9.7e-08 60.1 55 56.4
Atru.chr6.3527 Acer truncatum HOM05D005229 ORTHO05D006378 1.3e-07 59.7 56 62.5
Prupe.6G361000 Prunus persica HOM05D005229 ORTHO05D006378 1.7e-07 59.3 55 58.2
QL01p048658 Quercus lobata HOM05D005229 ORTHO05D006378 1.7e-07 59.3 55 58.2
THA.LOC104808816 Tarenaya hassleriana HOM05D005229 ORTHO05D006378 1.7e-07 59.3 55 56.4
FAN14G1738 Fragaria x ananassa HOM05D005229 ORTHO05D006378 2.2e-07 58.9 55 56.4
RcHm_v2.0_Chr3g0447921 Rosa chinensis HOM05D005229 ORTHO05D006378 2.2e-07 58.9 55 56.4
Potri.014G175600 Populus trichocarpa HOM05D005229 ORTHO05D006378 2.8e-07 58.5 58 65.5
Haze_04550 Corylus avellana HOM05D005229 ORTHO05D006378 3.7e-07 58.2 55 54.5
Potri.002G239700 Populus trichocarpa HOM05D005229 ORTHO05D006378 3.7e-07 58.2 58 65.5
Sabra14G0134400 Salix brachista HOM05D005229 ORTHO05D006378 3.7e-07 58.2 58 65.5
Gorai.001G101200 Gossypium raimondii HOM05D005229 ORTHO05D006378 4.8e-07 57.8 59 61.0
Ciclev10016637m.g Citrus clementina HOM05D005229 ORTHO05D006378 6.3e-07 57.4 55 52.7
TWI18G1321 Tripterygium wilfordii HOM05D005229 ORTHO05D006378 1.1e-06 56.6 55 56.4
Actinidia23801 Actinidia chinensis HOM05D005229 ORTHO05D006378 1.4e-06 56.2 59 64.4
Actinidia34531 Actinidia chinensis HOM05D005229 ORTHO05D006378 1.8e-06 55.8 59 61.0
CDE06G2797 Ceratophyllum demersum HOM05D005229 ORTHO05D006378 1.8e-06 55.8 58 53.4
AT4G12800 Arabidopsis thaliana HOM05D005229 ORTHO05D006378 2.4e-06 55.5 55 54.5
BcaB04g17739 Brassica carinata HOM05D005229 ORTHO05D006378 2.4e-06 55.5 58 55.2
Cfa006268 Carpinus fangiana HOM05D005229 ORTHO05D006378 2.4e-06 55.5 55 52.7
Eucgr.K02362 Eucalyptus grandis HOM05D005229 ORTHO05D006378 2.4e-06 55.5 59 49.2
Gohir.D07G094300 Gossypium hirsutum HOM05D005229 ORTHO05D006378 3.1e-06 55.1 54 61.1
Carub.0007s3001 Capsella rubella HOM05D005229 ORTHO05D006378 4.1e-06 54.7 55 54.5
CARHR218150 Cardamine hirsuta HOM05D005229 ORTHO05D006378 4.1e-06 54.7 58 58.6
Duzib138G0242 Durio zibethinus HOM05D005229 ORTHO05D006378 4.1e-06 54.7 59 57.6
Aa31LG9G5690 Aethionema arabicum HOM05D005229 ORTHO05D006378 5.3e-06 54.3 55 50.9
Thhalv10026195m.g Eutrema salsugineum HOM05D005229 ORTHO05D006378 5.3e-06 54.3 55 54.5
Manes.12G055600 Manihot esculenta HOM05D005229 ORTHO05D006378 5.3e-06 54.3 53 58.5
Sp7g09420 Schrenkiella parvula HOM05D005229 ORTHO05D006378 5.3e-06 54.3 55 54.5
PGR044G1943 Punica granatum HOM05D005229 ORTHO05D006378 6.9e-06 53.9 56 51.8
TWI36G1337 Tripterygium wilfordii HOM05D005229 ORTHO05D006378 6.9e-06 53.9 57 54.4


User provided reference genes

Program Settings