Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007142g0040 Nicotiana tabacum HOM05D011950 ORTHO05D009674 2.9e-96 355.1 170 100.0
Nitab4.5_0000639g0100 Nicotiana tabacum HOM05D011950 ORTHO05D009674 1.0e-85 320.1 170 90.6
Peaxi162Scf00000g00523 Petunia axillaris HOM05D011950 ORTHO05D009674 8.5e-64 247.3 178 72.5
PGSC0003DMG400008560 Solanum tuberosum HOM05D011950 ORTHO05D009674 1.5e-52 209.9 168 70.8
Sopen12g006760 Solanum pennellii HOM05D011950 ORTHO05D009674 2.9e-51 205.7 183 67.2
Nitab4.5_0004038g0010 Nicotiana tabacum HOM05D011950 ORTHO05D009674 1.9e-31 139.8 189 50.3
Nitab4.5_0020402g0010 Nicotiana tabacum HOM05D011950 ORTHO05D009674 1.2e-30 137.1 188 48.4
PGSC0003DMG400007050 Solanum tuberosum HOM05D011950 ORTHO05D009674 4.9e-27 125.2 184 45.1
Sopen07g030160 Solanum pennellii HOM05D011950 ORTHO05D009674 2.3e-24 116.3 189 41.8
PGSC0003DMG401021252 Solanum tuberosum HOM05D011950 ORTHO05D009674 2.5e-23 112.8 161 46.0
Solyc07g061890.1 Solanum lycopersicum HOM05D011950 ORTHO05D009674 5.6e-23 111.7 186 41.9
Dinv13326 Davidia involucrata HOM05D000230 ORTHO05D000176 1.4e-18 97.1 169 40.8
Dinv26679 Davidia involucrata HOM05D008142 ORTHO05D009674 1.2e-17 94.0 142 43.7
Hma1.2p1_0280F.1_g112890 Hydrangea macrophylla HOM05D008142 ORTHO05D009674 6.0e-17 91.7 174 38.5
Actinidia18850 Actinidia chinensis HOM05D008142 ORTHO05D009674 1.1e-15 87.4 132 46.2
Nitab4.5_0002209g0210 Nicotiana tabacum HOM05D011950 ORTHO05D009674 4.3e-15 85.5 111 52.3
RhsimUnG0205200 Rhododendron simsii HOM05D008142 ORTHO05D009674 5.6e-15 85.1 182 39.6
CSS0003990 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 7.3e-15 84.7 173 40.5
Peaxi162Scf00111g01112 Petunia axillaris HOM05D011950 ORTHO05D009674 1.3e-14 84.0 150 44.7
Actinidia35170 Actinidia chinensis HOM05D008142 ORTHO05D009674 2.8e-14 82.8 179 38.0
CSS0017983 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 4.8e-14 82.0 173 39.9
RhsimUnG0205300 Rhododendron simsii HOM05D008142 ORTHO05D009674 8.1e-14 81.3 168 36.3
CSS0032813 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 2.4e-13 79.7 173 37.0
MSTRG.15018 Avicennia marina HOM05D008142 ORTHO05D009674 2.4e-10 69.7 179 36.3
Potri.001G379400 Populus trichocarpa HOM05D008142 ORTHO05D009674 5.4e-10 68.6 166 39.8
Oeu001311.1 Olea europaea HOM05D008142 ORTHO05D009674 1.6e-09 67.0 180 33.9
Oeu020029.1 Olea europaea HOM05D008142 ORTHO05D009674 3.5e-09 65.9 133 37.6
MD03G1255600 Malus domestica HOM05D015893 ORTHO05D019166 6.0e-09 65.1 143 37.1
MD11G1276300 Malus domestica HOM05D015893 ORTHO05D019166 7.9e-09 64.7 142 35.9
Gohir.D01G033700 Gossypium hirsutum HOM05D008142 ORTHO05D009674 3.9e-08 62.4 149 34.2
Nn3g20734 Nelumbo nucifera HOM05D008142 ORTHO05D009674 3.9e-08 62.4 176 34.1
Prupe.4G151500 Prunus persica HOM05D015893 ORTHO05D019166 3.9e-08 62.4 179 33.5
Lsat_1_v5_gn_7_100541 Lactuca sativa HOM05D008142 ORTHO05D009674 5.1e-08 62.0 118 38.1
ECA236G2480 Erigeron canadensis HOM05D002418 ORTHO05D002572 8.7e-08 61.2 116 38.8
Nitab4.5_0020402g0020 Nicotiana tabacum HOM05D026636 ORTHO05D022967 1.1e-07 60.8 132 38.6
Nitab4.5_0004038g0030 Nicotiana tabacum HOM05D026636 ORTHO05D022967 2.5e-07 59.7 169 34.3
Nn4g26546 Nelumbo nucifera HOM05D008142 ORTHO05D009674 4.3e-07 58.9 148 31.8
TAR629G2490 Trochodendron aralioides HOM05D008142 ORTHO05D009674 4.3e-07 58.9 181 30.4
Migut.M00615 Erythranthe guttata HOM05D019704 ORTHO05D009674 5.6e-07 58.5 149 34.2
Gohir.D01G033600 Gossypium hirsutum HOM05D008142 ORTHO05D009674 7.4e-07 58.2 135 36.3
Gorai.002G040800 Gossypium raimondii HOM05D008142 ORTHO05D009674 7.4e-07 58.2 135 33.3
QL04p069987 Quercus lobata HOM05D008142 ORTHO05D009674 7.4e-07 58.2 146 37.7
Solyc12g011410.1 Solanum lycopersicum HOM05D011950 ORTHO05D009674 9.6e-07 57.8 61 55.7
Cpa.g.sc714.2 Carica papaya HOM05D008142 ORTHO05D009674 1.3e-06 57.4 141 36.9
VMungo1080G1331 Vigna mungo HOM05D012055 ORTHO05D014183 1.3e-06 57.4 142 35.2
Potri.001G379300 Populus trichocarpa HOM05D015893 ORTHO05D009674 1.6e-06 57.0 146 33.6
Eucgr.F03213 Eucalyptus grandis HOM05D008142 ORTHO05D009674 2.8e-06 56.2 138 35.5
Gorai.002G040500 Gossypium raimondii HOM05D008142 ORTHO05D009674 2.8e-06 56.2 136 33.1
Gorai.002G040700 Gossypium raimondii HOM05D008142 ORTHO05D009674 3.7e-06 55.8 135 33.3
DCAR_021049 Daucus carota HOM05D008142 ORTHO05D009674 4.8e-06 55.5 149 36.9
Lj3g0014819 Lotus japonicus HOM05D012055 ORTHO05D014183 4.8e-06 55.5 142 31.7
Gohir.D01G033400 Gossypium hirsutum HOM05D008142 ORTHO05D009674 8.1e-06 54.7 135 33.3


User provided reference genes

Program Settings