Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007134g0020 Nicotiana tabacum HOM05D000002 ORTHO05D000001 8.8e-48 193.4 102 100.0
Sopen05g011750 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-22 109.8 101 52.5
Sopen11g003490 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-22 109.4 101 52.5
Sopen12g023510 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-22 109.4 101 52.5
Nitab4.5_0002205g0040 Nicotiana tabacum HOM05D000002 ORTHO05D000001 2.8e-22 108.6 94 60.6
Sopen04g008990 Solanum pennellii HOM05D000002 ORTHO05D000001 9.2e-21 103.6 101 50.5
Sopen11g022270 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-20 102.4 101 49.5
Nitab4.5_0000485g0090 Nicotiana tabacum HOM05D000002 ORTHO05D000001 5.0e-19 97.8 101 46.5
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 1.1e-18 96.7 101 47.5
Sopen04g009020 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-18 96.7 101 46.5
Sopen10g014150 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-18 95.1 101 49.5
Migut.F01917 Erythranthe guttata HOM05D000002 ORTHO05D000001 9.5e-18 93.6 101 46.5
Sopen08g005830 Solanum pennellii HOM05D001396 ORTHO05D000001 9.5e-18 93.6 101 48.5
Sopen08g005850 Solanum pennellii HOM05D001396 ORTHO05D000001 2.1e-17 92.4 101 46.5
Nitab4.5_0001654g0030 Nicotiana tabacum HOM05D000002 ORTHO05D000001 1.4e-16 89.7 101 48.5
Sopen06g032630 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-16 89.4 101 46.5
Sopen04g009110 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-16 87.8 87 48.3
Peaxi162Scf00237g00226 Petunia axillaris HOM05D000002 ORTHO05D000001 2.6e-15 85.5 101 47.5
Migut.J01156 Erythranthe guttata HOM05D000002 ORTHO05D000001 4.4e-15 84.7 100 42.0
Sopen09g011210 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-14 83.2 91 42.9
Sopen01g027010 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-14 82.8 88 43.2
Migut.F01590 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.9e-14 82.0 100 41.0
Migut.H01198 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.9e-14 82.0 100 41.0
Gorai.013G092800 Gossypium raimondii HOM05D000002 ORTHO05D000001 2.9e-14 82.0 101 39.6
TAR099G0005 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.7e-14 81.6 101 37.6
CAN.G134.31 Capsicum annuum HOM05D000085 ORTHO05D006184 6.4e-14 80.9 81 44.4
Atru.chr7.838 Acer truncatum HOM05D000002 ORTHO05D000001 8.3e-14 80.5 101 40.6
Nitab4.5_0000905g0060 Nicotiana tabacum HOM05D000002 ORTHO05D000001 8.3e-14 80.5 102 49.0
Sopen01g029710 Solanum pennellii HOM05D000002 ORTHO05D000001 8.3e-14 80.5 101 36.6
Nitab4.5_0007988g0010 Nicotiana tabacum HOM05D000039 ORTHO05D004085 1.8e-13 79.3 90 55.6
Hma1.2p1_1940F.1_g308370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.2e-12 76.6 101 39.6
Sopen04g005320 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-12 75.9 73 49.3
Sopen04g005340 Solanum pennellii HOM05D000002 ORTHO05D000001 3.5e-12 75.1 79 46.8
Hma1.2p1_0240F.1_g100250 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.8e-12 73.9 97 37.1
Migut.D01270 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.3e-11 73.2 84 40.5
CANSAT21G1279 Cannabis sativa HOM05D000002 ORTHO05D000001 1.7e-11 72.8 100 34.0
Actinidia35992 Actinidia chinensis HOM05D000002 ORTHO05D000001 3.0e-11 72.0 100 38.0
Sopen03g010420 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-11 72.0 80 47.5
Migut.K01257 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.9e-11 71.6 101 33.7
Nitab4.5_0005183g0020 Nicotiana tabacum HOM05D000002 ORTHO05D000001 5.0e-11 71.2 71 50.7
Sopen06g015160 Solanum pennellii HOM05D000002 ORTHO05D000001 5.0e-11 71.2 77 44.2
COL.COLO4_12289 Corchorus olitorius HOM05D000002 ORTHO05D000001 6.6e-11 70.9 99 31.3
CSS0039053 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.6e-11 70.5 101 37.6
Migut.D01554 Erythranthe guttata HOM05D000002 ORTHO05D000001 8.6e-11 70.5 99 36.4
TAR301G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.5e-10 69.7 101 32.7
CSS0011046 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-10 68.9 101 37.6
Migut.E01660 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.5e-10 68.9 101 34.7
Hma1.2p1_0611F.1_g188700 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.5e-10 68.9 101 33.7
Migut.G01154 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.3e-10 68.6 101 34.7
Hma1.2p1_0200F.1_g086090 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.3e-10 68.6 101 36.6
Manes.08G105950 Manihot esculenta HOM05D000002 ORTHO05D000001 3.3e-10 68.6 100 41.0
CSS0042232 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-10 68.2 101 36.6
ECA240G2866 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-10 68.2 101 31.7
ECA233G6231 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.6e-10 67.8 100 33.0
ECA234G0762 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.6e-10 67.8 100 33.0
Hma1.2p1_0018F.1_g012350 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.6e-10 67.8 81 35.8
VMungo0540G0563 Vigna mungo HOM05D000002 ORTHO05D000001 5.6e-10 67.8 89 33.7
Rhsim05G0182900 Rhododendron simsii HOM05D000002 ORTHO05D000001 7.3e-10 67.4 91 35.2
Migut.C00657 Erythranthe guttata HOM05D000002 ORTHO05D000001 9.5e-10 67.0 101 33.7
Hma1.2p1_0462F.1_g158010 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.5e-10 67.0 99 36.4
Sopen01g012220 Solanum pennellii HOM05D000002 ORTHO05D000001 9.5e-10 67.0 101 37.6
Nn2g11549 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.2e-09 66.6 101 35.6
Nn8g39601 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.2e-09 66.6 82 42.7
Hma1.2p1_0602F.1_g187610 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.6e-09 66.2 101 33.7
CSS0025864 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-09 65.5 101 35.6
Migut.J01067 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.8e-09 65.5 101 33.7
Sopen06g032620 Solanum pennellii HOM05D000537 ORTHO05D000415 2.8e-09 65.5 74 44.6
Sopen09g021900 Solanum pennellii HOM05D000002 ORTHO05D000001 2.8e-09 65.5 77 40.3
VMungo0251G1185 Vigna mungo HOM05D000002 ORTHO05D000001 2.8e-09 65.5 90 33.3
Atru.chr13.1786 Acer truncatum HOM05D000002 ORTHO05D000001 3.6e-09 65.1 91 35.2
ECA236G4365 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-09 65.1 101 28.7
TWI63G0191 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 3.6e-09 65.1 96 28.1
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 4.7e-09 64.7 101 33.7
Migut.E01000 Erythranthe guttata HOM05D000002 ORTHO05D000001 4.7e-09 64.7 101 33.7
Atru.chr4.1289 Acer truncatum HOM05D000002 ORTHO05D000001 6.2e-09 64.3 89 34.8
Atru.chr6.358 Acer truncatum HOM05D000002 ORTHO05D000001 6.2e-09 64.3 103 34.0
Ciclev10003509m.g Citrus clementina HOM05D000002 ORTHO05D000001 6.2e-09 64.3 101 33.7
Nn7g37542 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.2e-09 64.3 82 41.5
VMungo1309G3040 Vigna mungo HOM05D000002 ORTHO05D000001 6.2e-09 64.3 90 34.4
Nitab4.5_0007044g0010 Nicotiana tabacum HOM05D000002 ORTHO05D000001 8.0e-09 63.9 43 76.7
Hma1.2p1_0576F.1_g181890 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.1e-08 63.5 99 34.3
Hma1.2p1_0577F.1_g182200 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.1e-08 63.5 94 35.1
Peaxi162Scf00063g00071 Petunia axillaris HOM05D000002 ORTHO05D000001 1.1e-08 63.5 100 32.0
Peaxi162Scf00168g01729 Petunia axillaris HOM05D000002 ORTHO05D000001 1.1e-08 63.5 100 32.0
Solyc02g030370.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 1.4e-08 63.2 101 29.7
Actinidia05383 Actinidia chinensis HOM05D000002 ORTHO05D000001 2.3e-08 62.4 81 37.0
Lj2g0024035 Lotus japonicus HOM05D000002 ORTHO05D000001 2.3e-08 62.4 81 34.6
Sopen04g011370 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-08 62.4 100 38.0
Sopen12g010660 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-08 62.4 68 45.6
CSS0045539 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-08 62.0 89 36.0
Gorai.001G219800 Gossypium raimondii HOM05D000002 ORTHO05D000001 3.1e-08 62.0 94 33.0
SGA_v2.0_scaffold400G50849 Striga asiatica HOM05D000002 ORTHO05D000001 3.1e-08 62.0 100 31.0
THA.LOC109115986 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 3.1e-08 62.0 101 34.7
TAR180G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.1e-08 62.0 100 31.0
Psat7g220520 Pisum sativum HOM05D000002 ORTHO05D000001 4.0e-08 61.6 79 31.6
Atru.chr6.1166 Acer truncatum HOM05D000002 ORTHO05D000001 5.2e-08 61.2 95 34.7
Atru.chr9.1627 Acer truncatum HOM05D000002 ORTHO05D000001 6.8e-08 60.8 99 33.3
ECA240G0216 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.8e-08 60.8 101 28.7
ECA248G2841 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.8e-08 60.8 101 27.7
Eucgr.H00940 Eucalyptus grandis HOM05D000002 ORTHO05D000001 6.8e-08 60.8 79 35.4
HanXRQChr13g0407151 Helianthus annuus HOM05D000002 ORTHO05D000001 6.8e-08 60.8 101 29.7
Hma1.2p1_0660F.1_g197730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.9e-08 60.5 90 34.4
Rhsim02G0160900 Rhododendron simsii HOM05D000002 ORTHO05D000001 8.9e-08 60.5 100 30.0
Sopen08g014470 Solanum pennellii HOM05D002431 ORTHO05D000001 8.9e-08 60.5 98 32.7
FvH4_2g23291 Fragaria vesca HOM05D000002 ORTHO05D000001 1.2e-07 60.1 99 31.3
Hma1.2p1_1596F.1_g292760 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.2e-07 60.1 100 31.0
Psat7g227320 Pisum sativum HOM05D000002 ORTHO05D000001 1.2e-07 60.1 79 29.1
Sopen06g017500 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-07 60.1 58 46.6
ECA236G2445 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.5e-07 59.7 101 27.7
MD12G1231800 Malus domestica HOM05D000002 ORTHO05D000001 1.5e-07 59.7 102 24.5
SHI23044 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-07 59.7 101 34.7
CSS0021297 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-07 59.3 80 35.0
Ciclev10013318m.g Citrus clementina HOM05D000002 ORTHO05D000001 2.0e-07 59.3 99 29.3
HanXRQChr14g0457051 Helianthus annuus HOM05D000002 ORTHO05D000001 2.0e-07 59.3 93 38.7
MD03G1056000 Malus domestica HOM05D000002 ORTHO05D000001 2.0e-07 59.3 99 30.3
Atru.chr6.233 Acer truncatum HOM05D000002 ORTHO05D000001 2.6e-07 58.9 91 31.9
Ciclev10030281m.g Citrus clementina HOM05D000132 ORTHO05D000058 2.6e-07 58.9 101 32.7
MD14G1225200 Malus domestica HOM05D000002 ORTHO05D000001 2.6e-07 58.9 100 29.0
Manes.13G013492 Manihot esculenta HOM05D000002 ORTHO05D000001 2.6e-07 58.9 88 28.4
Rhsim10G0160500 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.6e-07 58.9 95 31.6
CSS0021451 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.4e-07 58.5 80 36.2
Sopen03g005290 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-07 58.5 63 46.0
Gorai.008G092500 Gossypium raimondii HOM05D000002 ORTHO05D000001 5.8e-07 57.8 90 32.2
QL08p061042 Quercus lobata HOM05D000002 ORTHO05D000001 5.8e-07 57.8 79 34.2
THA.LOC109116472 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 5.8e-07 57.8 101 31.7
TPR.G7779 Trifolium pratense HOM05D000002 ORTHO05D000001 5.8e-07 57.8 100 31.0
CSS0017162 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.5e-07 57.4 100 33.0
THA.LOC104824784 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 7.5e-07 57.4 101 30.7
CSS0021283 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.8e-07 57.0 91 33.0
Hma1.2p1_0233F.1_g098110 Hydrangea macrophylla HOM05D014274 ORTHO05D024986 9.8e-07 57.0 90 34.4
MD00G1024600 Malus domestica HOM05D000002 ORTHO05D000001 9.8e-07 57.0 100 29.0
MD12G1185900 Malus domestica HOM05D000002 ORTHO05D000001 9.8e-07 57.0 100 30.0
MD17G1248200 Malus domestica HOM05D000002 ORTHO05D000001 9.8e-07 57.0 99 30.3
PSO339G0642 Papaver somniferum HOM05D000002 ORTHO05D000001 9.8e-07 57.0 78 37.2
Sabra06G0056900 Salix brachista HOM05D000002 ORTHO05D000001 9.8e-07 57.0 74 36.5
Atru.chr5.2226 Acer truncatum HOM05D000002 ORTHO05D000001 1.3e-06 56.6 94 31.9
PSO541G1536 Papaver somniferum HOM05D000002 ORTHO05D000001 1.3e-06 56.6 97 27.8
Psat1g154000 Pisum sativum HOM05D000002 ORTHO05D000001 1.3e-06 56.6 79 29.1
Sopen01g012520 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-06 56.6 95 31.6
THA.LOC104818098 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.3e-06 56.6 101 30.7
CANSAT54G2325 Cannabis sativa HOM05D000002 ORTHO05D000001 1.7e-06 56.2 93 28.0
HanXRQChr17g0541481 Helianthus annuus HOM05D000002 ORTHO05D000001 1.7e-06 56.2 100 26.0
MD13G1050200 Malus domestica HOM05D000002 ORTHO05D000001 1.7e-06 56.2 100 29.0
TAR541G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.7e-06 56.2 93 32.3
vmacro03720 Vaccinium macrocarpon HOM05D000002 ORTHO05D000001 1.7e-06 56.2 94 28.7
Atru.chr4.3156 Acer truncatum HOM05D000002 ORTHO05D000001 2.2e-06 55.8 100 30.0
Aqoxy5G02395 Aquilegia oxysepala HOM05D000002 ORTHO05D000001 2.2e-06 55.8 93 25.8
CSS0046748 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-06 55.8 99 31.3
Rhsim02G0228300 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.2e-06 55.8 78 30.8
Sopen07g003750 Solanum pennellii HOM05D000002 ORTHO05D000001 2.2e-06 55.8 101 31.7
HanXRQChr03g0078371 Helianthus annuus HOM05D000002 ORTHO05D000001 2.9e-06 55.5 100 23.0
HanXRQChr15g0476521 Helianthus annuus HOM05D000002 ORTHO05D000001 2.9e-06 55.5 100 27.0
Hma1.2p1_0006F.1_g004720 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.9e-06 55.5 86 36.0
Hma1.2p1_0354F.1_g133710 Hydrangea macrophylla HOM05D014274 ORTHO05D000001 2.9e-06 55.5 94 36.2
Hma1.2p1_0682F.1_g202600 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.9e-06 55.5 81 30.9
Hma1.2p1_0763F.1_g214730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.9e-06 55.5 76 34.2
MD14G1189500 Malus domestica HOM05D000002 ORTHO05D000001 2.9e-06 55.5 80 33.8
QL08p052300 Quercus lobata HOM05D000002 ORTHO05D000001 2.9e-06 55.5 92 37.0
Sp7g09245 Schrenkiella parvula HOM05D000002 ORTHO05D000001 2.9e-06 55.5 99 29.3
Sopen12g009430 Solanum pennellii HOM05D008648 ORTHO05D000001 2.9e-06 55.5 100 34.0
THA.LOC104806172 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.9e-06 55.5 101 28.7
THA.LOC104815444 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.9e-06 55.5 101 28.7
Eucgr.E02344 Eucalyptus grandis HOM05D000002 ORTHO05D000001 3.7e-06 55.1 100 39.0
Hma1.2p1_0021F.1_g014420 Hydrangea macrophylla HOM05D014274 ORTHO05D000001 3.7e-06 55.1 90 33.3
AagrBONN_evm.TU.Sc2ySwM_340.2104 Anthoceros agrestis HOM05D000002 ORTHO05D000001 4.9e-06 54.7 79 32.9
ECA233G4466 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.9e-06 54.7 80 28.8
Hma1.2p1_0020F.1_g014040 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.9e-06 54.7 92 32.6
MD02G1010600 Malus domestica HOM05D000002 ORTHO05D000001 4.9e-06 54.7 100 26.0
Sopen02g010030 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-06 54.7 44 59.1
HanXRQChr17g0566031 Helianthus annuus HOM05D000002 ORTHO05D000001 6.4e-06 54.3 80 36.2
MD05G1320000 Malus domestica HOM05D000002 ORTHO05D000001 6.4e-06 54.3 99 28.3
Nn1g03750 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.4e-06 54.3 80 30.0
PSO339G3901 Papaver somniferum HOM05D000002 ORTHO05D000001 6.4e-06 54.3 85 31.8
Rhsim02G0101600 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.4e-06 54.3 99 27.3
Sabra01G0117000 Salix brachista HOM05D000002 ORTHO05D000001 6.4e-06 54.3 79 32.9
TWI59G0793 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 6.4e-06 54.3 90 31.1
TAR042G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 6.4e-06 54.3 100 30.0
Atru.chr2.3010 Acer truncatum HOM05D000002 ORTHO05D000001 8.3e-06 53.9 78 32.1
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 8.3e-06 53.9 72 34.7
Duzib235G0480 Durio zibethinus HOM05D000002 ORTHO05D000001 8.3e-06 53.9 101 30.7
THA.LOC104807052 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 8.3e-06 53.9 101 27.7


User provided reference genes

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