Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007134g0010 Nicotiana tabacum HOM05D010441 ORTHO05D011509 3.1e-266 921.4 525 100.0
Solyc03g005640.1 Solanum lycopersicum HOM05D010441 ORTHO05D011509 1.5e-122 444.1 492 54.7
Sopen03g001650 Solanum pennellii HOM05D010441 ORTHO05D011509 1.6e-121 440.7 487 55.0
Nitab4.5_0001443g0070 Nicotiana tabacum HOM05D010441 ORTHO05D011509 1.9e-109 400.6 521 52.0
Nitab4.5_0000822g0020 Nicotiana tabacum HOM05D010441 ORTHO05D011509 3.8e-94 349.7 519 45.9
Nitab4.5_0003268g0070 Nicotiana tabacum HOM05D010441 ORTHO05D011509 1.4e-80 304.7 494 42.9
DCAR_003784 Daucus carota HOM05D013564 ORTHO05D011509 3.2e-53 213.8 472 34.5
Dinv41798 Davidia involucrata HOM05D013564 ORTHO05D011509 1.4e-43 181.8 451 34.1
Oeu011226.1 Olea europaea HOM05D013564 ORTHO05D011509 6.8e-43 179.5 423 34.0
CSS0044123 Camellia sinensis var. sinensis HOM05D013564 ORTHO05D011509 6.3e-41 172.9 476 29.6
Migut.G00478 Erythranthe guttata HOM05D013564 ORTHO05D011509 2.5e-37 161.0 439 30.5
TAR216G0007 Trochodendron aralioides HOM05D010441 ORTHO05D011509 3.2e-37 160.6 473 31.1
Migut.G00481 Erythranthe guttata HOM05D013564 ORTHO05D011509 9.5e-37 159.1 418 31.8
Nitab4.5_0006111g0030 Nicotiana tabacum HOM05D010441 ORTHO05D011509 1.2e-36 158.7 484 27.7
TAR365G1119 Trochodendron aralioides HOM05D010441 ORTHO05D011509 3.0e-35 154.1 480 30.4
Nitab4.5_0001051g0040 Nicotiana tabacum HOM05D010441 ORTHO05D011509 1.2e-31 142.1 198 40.4
PSO133G0006 Papaver somniferum HOM05D010441 ORTHO05D011509 7.8e-31 139.4 489 25.4
PSO832G3709 Papaver somniferum HOM05D013564 ORTHO05D011509 1.3e-30 138.7 486 27.2
Oeu046461.1 Olea europaea HOM05D010441 ORTHO05D011509 2.1e-28 131.3 208 41.8
Migut.G00550 Erythranthe guttata HOM05D013564 ORTHO05D011509 8.9e-27 125.9 475 29.1
TAR216G0006 Trochodendron aralioides HOM05D010441 ORTHO05D011509 4.1e-24 117.1 341 31.1
CDE12G0271 Ceratophyllum demersum HOM05D002556 ORTHO05D003153 1.2e-23 115.5 468 26.7
PSO541G1329 Papaver somniferum HOM05D010441 ORTHO05D011509 4.6e-23 113.6 357 28.6
Nn4g24472 Nelumbo nucifera HOM05D013564 ORTHO05D011509 1.3e-22 112.1 472 24.6
Nitab4.5_0003267g0010 Nicotiana tabacum HOM05D013564 ORTHO05D049380 3.0e-22 110.9 483 26.7
CDE04G2755 Ceratophyllum demersum HOM05D010441 ORTHO05D011509 3.9e-22 110.5 426 28.2
Nitab4.5_0002251g0010 Nicotiana tabacum HOM05D013564 ORTHO05D049380 5.6e-21 106.7 478 26.2
Migut.G00554 Erythranthe guttata HOM05D013564 ORTHO05D011509 8.0e-20 102.8 442 27.4
Nn4g24362 Nelumbo nucifera HOM05D010441 ORTHO05D011509 2.3e-14 84.7 247 29.1
TAR628G1739 Trochodendron aralioides HOM05D010441 ORTHO05D011509 4.3e-13 80.5 179 36.3
Gohir.A09G003400 Gossypium hirsutum HOM05D000056 ORTHO05D000019 1.3e-09 68.9 182 28.6
Gohir.D09G003120 Gossypium hirsutum HOM05D000056 ORTHO05D000019 3.7e-09 67.4 182 29.1
Gorai.006G003900 Gossypium raimondii HOM05D000056 ORTHO05D000019 3.7e-09 67.4 182 29.1
Nn3g18361 Nelumbo nucifera HOM05D010441 ORTHO05D011509 4.9e-09 67.0 142 30.3
Sopen02g037590 Solanum pennellii HOM05D000056 ORTHO05D000019 5.4e-08 63.5 476 22.5
Eucgr.J00472 Eucalyptus grandis HOM05D000056 ORTHO05D000019 9.2e-08 62.8 181 32.6
Sabra03G0115800 Salix brachista HOM05D000056 ORTHO05D000019 9.2e-08 62.8 184 29.9
Solyc02g093020.3 Solanum lycopersicum HOM05D000056 ORTHO05D000019 9.2e-08 62.8 476 22.3
Lj7P443T28 Lonicera japonica HOM05D000991 ORTHO05D000848 1.6e-07 62.0 138 34.1
Nn2g14914 Nelumbo nucifera HOM05D000056 ORTHO05D000019 1.6e-07 62.0 177 26.0
PSO063G6556 Papaver somniferum HOM05D000056 ORTHO05D000019 1.6e-07 62.0 187 28.3
Lj7A448G23 Lonicera japonica HOM05D000991 ORTHO05D000848 2.1e-07 61.6 138 34.1
Lj9C705G10 Lonicera japonica HOM05D000991 ORTHO05D000848 2.7e-07 61.2 90 40.0
Potri.003G159300 Populus trichocarpa HOM05D000056 ORTHO05D000019 2.7e-07 61.2 184 29.3
Sabra01G0050200 Salix brachista HOM05D000056 ORTHO05D000019 2.7e-07 61.2 184 28.3
PGSC0003DMG400035938 Solanum tuberosum HOM05D000056 ORTHO05D000019 2.7e-07 61.2 476 22.3
HPP92_021573 Vanilla planifolia HOM05D000056 ORTHO05D000019 2.7e-07 61.2 194 26.3
THA.LOC104827372 Tarenaya hassleriana HOM05D000056 ORTHO05D000019 3.5e-07 60.8 446 22.9
AT3G50120 Arabidopsis thaliana HOM05D000056 ORTHO05D000019 4.6e-07 60.5 182 29.1
Lj9C205T5 Lonicera japonica HOM05D000991 ORTHO05D000848 4.6e-07 60.5 91 38.5
BolC7t45087H Brassica oleracea HOM05D000056 ORTHO05D000019 6.0e-07 60.1 467 22.5
Thhalv10010280m.g Eutrema salsugineum HOM05D000056 ORTHO05D000019 6.0e-07 60.1 182 28.6
Potri.003G159400 Populus trichocarpa HOM05D000056 ORTHO05D000019 6.0e-07 60.1 188 29.3
CDE01G0399 Ceratophyllum demersum HOM05D002556 ORTHO05D003153 7.8e-07 59.7 134 32.8
Lj1C88T9 Lonicera japonica HOM05D000056 ORTHO05D000019 7.8e-07 59.7 187 27.3
SEGI_03428 Sequoiadendron giganteum HOM05D000991 ORTHO05D000848 7.8e-07 59.7 139 30.2
AL5G30240 Arabidopsis lyrata HOM05D000056 ORTHO05D000019 1.0e-06 59.3 182 28.6
Atru.chr1.1480 Acer truncatum HOM05D000056 ORTHO05D000019 1.3e-06 58.9 185 28.6
Cpa.g.sc38.19 Carica papaya HOM05D000056 ORTHO05D000019 1.3e-06 58.9 184 29.3
Glyma.02G271000 Glycine max HOM05D000056 ORTHO05D000019 1.3e-06 58.9 184 25.5
Gohir.D04G039700 Gossypium hirsutum HOM05D000056 ORTHO05D000019 1.3e-06 58.9 191 27.7
Gorai.012G044700 Gossypium raimondii HOM05D000056 ORTHO05D000019 1.3e-06 58.9 191 27.7
Lj9C206T1 Lonicera japonica HOM05D000991 ORTHO05D000848 1.3e-06 58.9 115 35.7
QL07p012272 Quercus lobata HOM05D000056 ORTHO05D000019 1.3e-06 58.9 187 27.3
A03p47710 Brassica napus HOM05D000056 ORTHO05D000019 1.7e-06 58.5 466 22.3
BraA02t08095Z Brassica rapa HOM05D000056 ORTHO05D000019 1.7e-06 58.5 187 27.3
BraA03t13882Z Brassica rapa HOM05D000056 ORTHO05D000019 1.7e-06 58.5 466 22.3
Sabra03G0115700 Salix brachista HOM05D000056 ORTHO05D000019 1.7e-06 58.5 184 27.7
Os08g0337800 Oryza sativa ssp. japonica HOM05D000056 ORTHO05D000019 2.3e-06 58.2 184 25.0
AL5G30270 Arabidopsis lyrata HOM05D000056 ORTHO05D000019 3.0e-06 57.8 181 27.1
A09p43230 Brassica napus HOM05D000056 ORTHO05D000019 3.0e-06 57.8 454 22.5
C08p25220 Brassica napus HOM05D000056 ORTHO05D000019 3.0e-06 57.8 454 22.5
BolC8t50144H Brassica oleracea HOM05D000056 ORTHO05D000019 3.0e-06 57.8 454 22.5
BraA09t39793Z Brassica rapa HOM05D000056 ORTHO05D000019 3.0e-06 57.8 456 22.8
ECA233G4851 Erigeron canadensis HOM05D000056 ORTHO05D000019 3.0e-06 57.8 181 28.7
Lalb_Chr04g0258311 Lupinus albus HOM05D000991 ORTHO05D000848 3.0e-06 57.8 133 27.1
Rhsim12G0027200 Rhododendron simsii HOM05D000056 ORTHO05D000019 3.0e-06 57.8 499 20.8
Sp5g12000 Schrenkiella parvula HOM05D000056 ORTHO05D000019 3.0e-06 57.8 184 27.2
Hund11769 Selenicereus undatus HOM05D000056 ORTHO05D000019 3.0e-06 57.8 188 28.7
SEGI_03759 Sequoiadendron giganteum HOM05D000991 ORTHO05D000848 3.0e-06 57.8 141 29.1
BcaC06g33285 Brassica carinata HOM05D000056 ORTHO05D000019 3.9e-06 57.4 466 22.3
BcaC07g39479 Brassica carinata HOM05D000056 ORTHO05D000019 3.9e-06 57.4 454 22.5
Lj9A705G38 Lonicera japonica HOM05D000991 ORTHO05D000848 3.9e-06 57.4 115 36.5
Nn3g16183 Nelumbo nucifera HOM05D000056 ORTHO05D000019 3.9e-06 57.4 190 29.5
AT3G50170 Arabidopsis thaliana HOM05D000056 ORTHO05D000019 5.1e-06 57.0 181 27.6
BcaB01g00638 Brassica carinata HOM05D000056 ORTHO05D000019 5.1e-06 57.0 438 22.1
Migut.K01212 Erythranthe guttata HOM05D000056 ORTHO05D000019 5.1e-06 57.0 185 27.6
Lsat_1_v5_gn_8_32861 Lactuca sativa HOM05D000056 ORTHO05D000019 5.1e-06 57.0 142 33.1
Lj7P445T12 Lonicera japonica HOM05D000991 ORTHO05D000848 5.1e-06 57.0 167 28.1
Lj9C705T13 Lonicera japonica HOM05D000991 ORTHO05D000848 5.1e-06 57.0 133 32.3
Actinidia33988 Actinidia chinensis HOM05D000056 ORTHO05D000019 6.6e-06 56.6 187 28.9
BcaC06g33107 Brassica carinata HOM05D000056 ORTHO05D000019 6.6e-06 56.6 471 22.1
Cc03_g06600 Coffea canephora HOM05D000056 ORTHO05D000019 6.6e-06 56.6 185 28.6
Lsat_1_v5_gn_6_69420 Lactuca sativa HOM05D000991 ORTHO05D000848 6.6e-06 56.6 139 28.1
Lj7P446T13 Lonicera japonica HOM05D000991 ORTHO05D000848 6.6e-06 56.6 168 29.2
Os11g0540600 Oryza sativa ssp. japonica HOM05D000056 ORTHO05D000019 6.6e-06 56.6 181 27.1
PSO781G0149 Papaver somniferum HOM05D000056 ORTHO05D000019 6.6e-06 56.6 172 27.3
Potri.001G071300 Populus trichocarpa HOM05D000056 ORTHO05D000019 6.6e-06 56.6 187 26.7
Prupe.1G210700 Prunus persica HOM05D000056 ORTHO05D000019 6.6e-06 56.6 182 27.5
SalBow2G2264 Salvia bowleyana HOM05D000056 ORTHO05D000019 6.6e-06 56.6 189 28.6
Aa31LG4G18480 Aethionema arabicum HOM05D000056 ORTHO05D000019 8.6e-06 56.2 182 27.5
A03p47740 Brassica napus HOM05D000056 ORTHO05D000019 8.6e-06 56.2 445 22.2
Carub.0005s1646 Capsella rubella HOM05D000056 ORTHO05D000019 8.6e-06 56.2 182 27.5
CiPaw.05G097300 Carya illinoinensis HOM05D000056 ORTHO05D000019 8.6e-06 56.2 197 28.4
Cc03_g06650 Coffea canephora HOM05D000056 ORTHO05D000019 8.6e-06 56.2 185 28.6
COL.COLO4_11471 Corchorus olitorius HOM05D000056 ORTHO05D000019 8.6e-06 56.2 181 27.1
Lj7P444T15 Lonicera japonica HOM05D000991 ORTHO05D000848 8.6e-06 56.2 167 29.3
Nn1g04741 Nelumbo nucifera HOM05D000056 ORTHO05D000019 8.6e-06 56.2 435 23.9
Sp5g11960 Schrenkiella parvula HOM05D000056 ORTHO05D000019 8.6e-06 56.2 183 28.4
TAR622G0654 Trochodendron aralioides HOM05D000056 ORTHO05D000019 8.6e-06 56.2 189 29.6


User provided reference genes

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