Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007132g0030 Nicotiana tabacum HOM05D004998 ORTHO05D006104 4.6e-65 251.5 171 100.0
Nitab4.5_0000272g0050 Nicotiana tabacum HOM05D004998 ORTHO05D006104 3.5e-57 225.3 182 75.8
Nitab4.5_0006945g0010 Nicotiana tabacum HOM05D004998 ORTHO05D006104 3.5e-57 225.3 169 94.1
PGSC0003DMG400002149 Solanum tuberosum HOM05D004998 ORTHO05D006104 5.8e-44 181.4 175 61.7
Sopen06g001560 Solanum pennellii HOM05D004998 ORTHO05D006104 2.9e-43 179.1 174 61.5
Solyc06g005600.3 Solanum lycopersicum HOM05D004998 ORTHO05D006104 3.8e-43 178.7 174 61.5
Peaxi162Scf00092g01117 Petunia axillaris HOM05D004998 ORTHO05D006104 6.0e-41 171.4 173 59.0
Peaxi162Scf00122g01415 Petunia axillaris HOM05D004998 ORTHO05D006104 4.0e-37 158.7 189 54.5
Lj1A149T62 Lonicera japonica HOM05D004998 ORTHO05D006104 4.8e-30 135.2 173 48.0
Dinv17028 Davidia involucrata HOM05D004998 ORTHO05D006104 5.8e-28 128.3 173 47.4
Dinv42976 Davidia involucrata HOM05D004998 ORTHO05D006104 5.8e-28 128.3 173 47.4
Dinv43123 Davidia involucrata HOM05D004998 ORTHO05D006104 5.8e-28 128.3 173 47.4
CSS0033668 Camellia sinensis var. sinensis HOM05D004998 ORTHO05D006104 1.6e-25 120.2 176 45.5
SGA_v2.0_scaffold41G15739 Striga asiatica HOM05D004998 ORTHO05D006104 3.0e-24 115.9 178 45.5
Actinidia23927 Actinidia chinensis HOM05D004998 ORTHO05D006104 8.7e-24 114.4 173 45.7
CSS0032367 Camellia sinensis var. sinensis HOM05D004998 ORTHO05D006104 1.1e-23 114.0 173 46.2
Rhsim13G0078800 Rhododendron simsii HOM05D004998 ORTHO05D006104 5.6e-23 111.7 176 46.0
GSVIVG01024930001 Vitis vinifera HOM05D004998 ORTHO05D006104 1.3e-22 110.5 174 42.5
Hma1.2p1_0615F.1_g189810 Hydrangea macrophylla HOM05D004998 ORTHO05D006104 2.1e-22 109.8 174 42.0
Cfa011521 Carpinus fangiana HOM05D004998 ORTHO05D006104 3.7e-22 109.0 172 42.4
Ciclev10029345m.g Citrus clementina HOM05D004998 ORTHO05D006104 4.8e-22 108.6 172 43.6
vmacro03047 Vaccinium macrocarpon HOM05D004998 ORTHO05D006104 1.4e-21 107.1 176 43.8
Migut.D02075 Erythranthe guttata HOM05D004998 ORTHO05D006104 1.8e-21 106.7 176 44.3
AUR62009547 Chenopodium quinoa HOM05D004998 ORTHO05D006104 2.4e-21 106.3 172 41.3
Eucgr.B02327 Eucalyptus grandis HOM05D004998 ORTHO05D006104 2.4e-21 106.3 173 39.3
AUR62001761 Chenopodium quinoa HOM05D004998 ORTHO05D006104 9.0e-21 104.4 172 40.7
Oeu053883.1 Olea europaea HOM05D004998 ORTHO05D006104 9.0e-21 104.4 174 46.0
Cc01_g13080 Coffea canephora HOM05D004998 ORTHO05D006104 1.2e-20 104.0 176 39.8
Lalb_Chr03g0026531 Lupinus albus HOM05D004998 ORTHO05D006104 1.2e-20 104.0 173 40.5
Actinidia34418 Actinidia chinensis HOM05D004998 ORTHO05D006104 1.5e-20 103.6 173 42.2
TWI75G0636 Tripterygium wilfordii HOM05D004998 ORTHO05D006104 1.5e-20 103.6 176 41.5
QL01p031100 Quercus lobata HOM05D004998 ORTHO05D006104 2.6e-20 102.8 174 47.7
Prupe.6G073200 Prunus persica HOM05D004998 ORTHO05D006104 5.8e-20 101.7 172 40.7
DCAR_005961 Daucus carota HOM05D004998 ORTHO05D006104 1.7e-19 100.1 172 39.5
PGR102G0830 Punica granatum HOM05D004998 ORTHO05D006104 1.7e-19 100.1 179 40.8
HanXRQChr07g0197281 Helianthus annuus HOM05D004998 ORTHO05D006104 2.2e-19 99.8 170 41.8
Nn2g11147 Nelumbo nucifera HOM05D004998 ORTHO05D006104 2.2e-19 99.8 177 39.0
SalBow3G1756 Salvia bowleyana HOM05D004998 ORTHO05D006104 2.2e-19 99.8 175 40.6
MSTRG.18567 Avicennia marina HOM05D004998 ORTHO05D006104 3.8e-19 99.0 178 42.7
Potri.009G033400 Populus trichocarpa HOM05D004998 ORTHO05D006104 4.9e-19 98.6 170 42.4
Hund18896 Selenicereus undatus HOM05D004998 ORTHO05D006104 4.9e-19 98.6 174 37.4
Atru.chr3.3979 Acer truncatum HOM05D004998 ORTHO05D006104 6.5e-19 98.2 175 41.1
Thecc.09G318900 Theobroma cacao HOM05D004998 ORTHO05D006104 6.5e-19 98.2 173 40.5
TWI79G0863 Tripterygium wilfordii HOM05D004998 ORTHO05D006104 8.4e-19 97.8 177 43.5
THA.LOC104810769 Tarenaya hassleriana HOM05D004998 ORTHO05D006104 1.1e-18 97.4 172 40.1
CiPaw.14G067400 Carya illinoinensis HOM05D004998 ORTHO05D006104 1.4e-18 97.1 175 41.7
Glyma.15G036800 Glycine max HOM05D004998 ORTHO05D006104 1.4e-18 97.1 175 38.9
EL10Ac7g16043 Beta vulgaris HOM05D004998 ORTHO05D006104 3.2e-18 95.9 174 41.4
Phvul.L006843 Phaseolus vulgaris HOM05D004998 ORTHO05D006104 4.2e-18 95.5 173 36.4
Glyma.13G337700 Glycine max HOM05D004998 ORTHO05D006104 5.5e-18 95.1 175 40.0
arahy.Tifrunner.gnm1.ann1.AD2TJP Arachis hypogaea HOM05D004998 ORTHO05D006104 1.2e-17 94.0 173 38.2
arahy.Tifrunner.gnm1.ann1.JSTV8M Arachis hypogaea HOM05D004998 ORTHO05D006104 1.6e-17 93.6 173 38.2
Duzib168G2185 Durio zibethinus HOM05D004998 ORTHO05D006104 1.6e-17 93.6 170 39.4
ClCG02G020020 Citrullus lanatus HOM05D004998 ORTHO05D006104 3.5e-17 92.4 175 40.6
COL.COLO4_18543 Corchorus olitorius HOM05D004998 ORTHO05D006104 3.5e-17 92.4 173 39.9
Gohir.A05G094300 Gossypium hirsutum HOM05D004998 ORTHO05D006104 3.5e-17 92.4 173 38.7
Lj3g0014072 Lotus japonicus HOM05D004998 ORTHO05D006104 3.5e-17 92.4 175 38.3
TAR636G1117 Trochodendron aralioides HOM05D004998 ORTHO05D006104 3.5e-17 92.4 178 37.1
VMungo1080G1028 Vigna mungo HOM05D004998 ORTHO05D006104 3.5e-17 92.4 172 35.5
Duzib150G0269 Durio zibethinus HOM05D004998 ORTHO05D006104 4.6e-17 92.0 173 38.7
TAR633G0520 Trochodendron aralioides HOM05D004998 ORTHO05D006104 6.0e-17 91.7 175 37.7
Manes.01G171600 Manihot esculenta HOM05D004998 ORTHO05D006104 1.0e-16 90.9 177 40.7
HanXRQChr12g0374241 Helianthus annuus HOM05D004998 ORTHO05D006104 1.3e-16 90.5 171 39.8
ECA247G2861 Erigeron canadensis HOM05D004998 ORTHO05D006104 1.8e-16 90.1 177 39.5
Sabra09G0023800 Salix brachista HOM05D004998 ORTHO05D006104 1.8e-16 90.1 166 40.4
Lsat_1_v5_gn_9_23841 Lactuca sativa HOM05D004998 ORTHO05D006104 2.3e-16 89.7 172 39.0
Aqoxy1G00915 Aquilegia oxysepala HOM05D004998 ORTHO05D006104 3.0e-16 89.4 174 37.4
FvH4_3g36750 Fragaria vesca HOM05D004998 ORTHO05D006104 3.0e-16 89.4 174 40.8
Nn2g13381 Nelumbo nucifera HOM05D004998 ORTHO05D006104 3.9e-16 89.0 171 45.6
Sc12g0001370 Simmondsia chinensis HOM05D004998 ORTHO05D006104 3.9e-16 89.0 135 43.0
MD03G1088800 Malus domestica HOM05D004998 ORTHO05D006104 6.7e-16 88.2 173 38.2
CsaV3_6G016720 Cucumis sativus L. HOM05D004998 ORTHO05D006104 8.7e-16 87.8 171 38.0
TPR.G5593 Trifolium pratense HOM05D004998 ORTHO05D006104 1.5e-15 87.0 175 47.4
MD11G1097800 Malus domestica HOM05D004998 ORTHO05D006104 1.3e-14 84.0 173 37.0
Psat5g285160 Pisum sativum HOM05D004998 ORTHO05D006104 1.6e-14 83.6 175 40.0
CANSAT54G1321 Cannabis sativa HOM05D004998 ORTHO05D006104 2.8e-14 82.8 172 41.3
Aa31LG1G11810 Aethionema arabicum HOM05D000959 ORTHO05D000775 4.8e-14 82.0 175 40.0
Gohir.D05G094800 Gossypium hirsutum HOM05D004998 ORTHO05D006104 4.8e-14 82.0 170 34.7
MBI14_g12121_MAGBIO Magnolia biondii HOM05D004998 ORTHO05D006104 4.8e-14 82.0 177 37.3
FAN11G2014 Fragaria x ananassa HOM05D004998 ORTHO05D006104 6.2e-14 81.6 174 40.2
MELO3C025903.2 Cucumis melo HOM05D004998 ORTHO05D006104 8.2e-14 81.3 171 36.3
RcHm_v2.0_Chr5g0065711 Rosa chinensis HOM05D004998 ORTHO05D006104 1.1e-13 80.9 173 38.7
Ah.08g219770 Amaranthus hybridus HOM05D004998 ORTHO05D006104 1.4e-13 80.5 178 34.3
Medtr2g097480 Medicago truncatula HOM05D004998 ORTHO05D006104 1.4e-13 80.5 174 35.6
CiPaw.13G091800 Carya illinoinensis HOM05D004998 ORTHO05D006104 4.1e-13 79.0 165 35.8
FAN21G1380 Fragaria x ananassa HOM05D004998 ORTHO05D006104 6.9e-13 78.2 180 38.9
Gorai.009G098000 Gossypium raimondii HOM05D004998 ORTHO05D006104 6.9e-13 78.2 170 34.1
Haze_24126 Corylus avellana HOM05D004998 ORTHO05D006104 9.0e-13 77.8 79 54.4
Thhalv10014846m.g Eutrema salsugineum HOM05D004998 ORTHO05D006104 9.0e-13 77.8 178 36.0
Gohir.A03G043800 Gossypium hirsutum HOM05D004998 ORTHO05D006104 9.0e-13 77.8 154 40.9
ATR0559G067 Amborella trichopoda HOM05D004998 ORTHO05D006104 1.5e-12 77.0 168 33.9
CARHR285830 Cardamine hirsuta HOM05D004998 ORTHO05D006104 1.5e-12 77.0 172 36.6
Dinv06259 Davidia involucrata HOM05D004998 ORTHO05D006104 1.5e-12 77.0 84 56.0
Gohir.D03G123600 Gossypium hirsutum HOM05D004998 ORTHO05D006104 1.5e-12 77.0 154 40.3
BcaC03g14012 Brassica carinata HOM05D004998 ORTHO05D006104 7.6e-12 74.7 183 35.0
C02p12480 Brassica napus HOM05D004998 ORTHO05D006104 7.6e-12 74.7 183 35.0
BolC2t07348H Brassica oleracea HOM05D004998 ORTHO05D006104 7.6e-12 74.7 183 35.0
A02p07120 Brassica napus HOM05D004998 ORTHO05D006104 1.7e-11 73.6 180 32.8
BraA02t05793Z Brassica rapa HOM05D004998 ORTHO05D006104 3.8e-11 72.4 183 34.4
Gorai.003G130300 Gossypium raimondii HOM05D004998 ORTHO05D006104 3.8e-11 72.4 154 39.0
HPP92_006623 Vanilla planifolia HOM05D004998 ORTHO05D006104 3.8e-11 72.4 94 47.9
AT5G59460 Arabidopsis thaliana HOM05D004998 ORTHO05D006104 5.0e-11 72.0 175 35.4
Carub.0008s2013 Capsella rubella HOM05D004998 ORTHO05D006104 5.0e-11 72.0 175 35.4
AL8G35930 Arabidopsis lyrata HOM05D004998 ORTHO05D006104 6.5e-11 71.6 172 35.5
C03p13690 Brassica napus HOM05D004998 ORTHO05D006104 6.5e-11 71.6 187 33.7
FAN16G3214 Fragaria x ananassa HOM05D004998 ORTHO05D006104 6.5e-11 71.6 193 37.3
PSO339G2709 Papaver somniferum HOM05D004998 ORTHO05D006104 1.4e-10 70.5 177 33.3
CDE02G2808 Ceratophyllum demersum HOM05D004998 ORTHO05D006104 2.5e-10 69.7 170 33.5
Sed0008555 Sechium edule HOM05D004998 ORTHO05D006104 7.1e-10 68.2 172 46.5
BcaB05g22508 Brassica carinata HOM05D004998 ORTHO05D006104 9.3e-10 67.8 180 32.8
Sp6g21150 Schrenkiella parvula HOM05D004998 ORTHO05D006104 1.2e-09 67.4 183 31.7
CDE08G1537 Ceratophyllum demersum HOM05D004998 ORTHO05D006104 1.6e-09 67.0 95 44.2
Os01g0144600 Oryza sativa ssp. japonica HOM05D004998 ORTHO05D006104 1.6e-09 67.0 190 34.7
Cpa.g.sc81.121 Carica papaya HOM05D004998 ORTHO05D006104 2.1e-09 66.6 63 63.5
BraA10t43749Z Brassica rapa HOM05D004998 ORTHO05D006104 1.3e-08 63.9 67 50.7
Thhalv10002686m.g Eutrema salsugineum HOM05D004998 ORTHO05D006104 1.8e-08 63.5 172 33.7
Aa31LG4G15620 Aethionema arabicum HOM05D004998 ORTHO05D006104 3.0e-08 62.8 169 33.1
A10p16680 Brassica napus HOM05D004998 ORTHO05D006104 3.9e-08 62.4 66 50.0
Zm00001eb124480 Zea mays HOM05D004998 ORTHO05D006104 1.5e-07 60.5 71 47.9
Pp3c16_15780 Physcomitrium patens HOM05D004998 ORTHO05D006104 2.5e-07 59.7 71 43.7
BcaB08g36256 Brassica carinata HOM05D004998 ORTHO05D006104 3.3e-07 59.3 173 32.9
FAN21G1361 Fragaria x ananassa HOM05D004998 ORTHO05D006104 4.3e-07 58.9 160 36.9
C09p51870 Brassica napus HOM05D004998 ORTHO05D006104 5.7e-07 58.5 73 49.3
FvH4_3g41460 Fragaria vesca HOM05D004998 ORTHO05D006104 9.7e-07 57.8 94 37.2
BcaC04g19766 Brassica carinata HOM05D004998 ORTHO05D006104 2.2e-06 56.6 71 50.7
BolC3t13819H Brassica oleracea HOM05D004998 ORTHO05D006104 2.2e-06 56.6 84 42.9
BolC9t58049H Brassica oleracea HOM05D004998 ORTHO05D006104 2.2e-06 56.6 71 50.7
FAN11G1834 Fragaria x ananassa HOM05D004998 ORTHO05D006104 6.3e-06 55.1 160 30.0
FAN25G2664 Fragaria x ananassa HOM05D004998 ORTHO05D006104 6.3e-06 55.1 160 36.9


User provided reference genes

Program Settings