Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007132g0020 Nicotiana tabacum HOM05D006754 ORTHO05D008403 6.8e-170 600.5 292 100.0
Nitab4.5_0000272g0070 Nicotiana tabacum HOM05D006754 ORTHO05D008403 1.2e-153 546.6 272 97.4
PGSC0003DMG400030707 Solanum tuberosum HOM05D006754 ORTHO05D008403 1.2e-153 546.6 292 88.0
Solyc07g007700.3 Solanum lycopersicum HOM05D006754 ORTHO05D008403 2.0e-153 545.8 292 88.4
Sopen07g003690 Solanum pennellii HOM05D006754 ORTHO05D008403 3.4e-153 545.0 292 88.0
CAN.G969.5 Capsicum annuum HOM05D006754 ORTHO05D008403 2.8e-147 525.4 292 83.2
CSS0026926 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 1.1e-135 486.9 289 79.2
CSS0030688 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 3.2e-135 485.3 289 78.9
Peaxi162Scf00122g00144 Petunia axillaris HOM05D006754 ORTHO05D008403 3.9e-133 478.4 278 83.5
Hma1.2p1_0615F.1_g189790 Hydrangea macrophylla HOM05D006754 ORTHO05D008403 1.3e-128 463.4 288 75.7
MSTRG.21206 Avicennia marina HOM05D006754 ORTHO05D008403 1.4e-127 459.9 289 76.8
Oeu026710.1 Olea europaea HOM05D006754 ORTHO05D008403 2.5e-127 459.1 288 76.7
Potri.009G033700 Populus trichocarpa HOM05D006754 ORTHO05D008403 4.6e-126 454.9 288 74.0
Atru.chr3.3972 Acer truncatum HOM05D006754 ORTHO05D008403 6.1e-126 454.5 288 74.3
Ciclev10030407m.g Citrus clementina HOM05D006754 ORTHO05D008403 1.5e-124 449.9 288 73.6
QL01p030969 Quercus lobata HOM05D006754 ORTHO05D008403 3.3e-124 448.7 288 74.0
Cc01_g13150 Coffea canephora HOM05D006754 ORTHO05D008403 5.7e-124 448.0 287 72.8
Migut.F00608 Erythranthe guttata HOM05D006754 ORTHO05D008403 9.7e-124 447.2 288 74.0
RcHm_v2.0_Chr5g0065861 Rosa chinensis HOM05D006754 ORTHO05D008403 1.3e-123 446.8 286 74.5
FAN11G1342 Fragaria x ananassa HOM05D006754 ORTHO05D008403 4.8e-123 444.9 279 75.3
Sabra16G0147200 Salix brachista HOM05D006754 ORTHO05D008403 6.3e-123 444.5 288 74.0
FvH4_3g36800 Fragaria vesca HOM05D006754 ORTHO05D008403 1.8e-122 443.0 278 75.2
Potri.001G242400 Populus trichocarpa HOM05D006754 ORTHO05D008403 2.4e-122 442.6 288 73.3
TWI79G1092 Tripterygium wilfordii HOM05D006754 ORTHO05D008403 2.4e-122 442.6 290 72.8
Cpa.g.sc81.116 Carica papaya HOM05D006754 ORTHO05D008403 3.1e-122 442.2 279 74.2
Lj2P1066T40 Lonicera japonica HOM05D006754 ORTHO05D008403 2.6e-121 439.1 289 71.6
FAN25G2379 Fragaria x ananassa HOM05D006754 ORTHO05D008403 4.5e-121 438.3 277 74.7
Nn8g38772 Nelumbo nucifera HOM05D006754 ORTHO05D008403 7.7e-121 437.6 280 75.4
CiPaw.14G067200 Carya illinoinensis HOM05D006754 ORTHO05D008403 1.7e-120 436.4 289 73.4
Haze_24130 Corylus avellana HOM05D006754 ORTHO05D008403 1.7e-120 436.4 289 72.7
PGR102G0280 Punica granatum HOM05D006754 ORTHO05D008403 2.2e-120 436.0 288 71.5
COL.COLO4_18549 Corchorus olitorius HOM05D006754 ORTHO05D008403 5.0e-120 434.9 289 72.7
MD03G1088200 Malus domestica HOM05D006754 ORTHO05D008403 6.5e-120 434.5 288 71.9
Thecc.09G318400 Theobroma cacao HOM05D006754 ORTHO05D008403 4.2e-119 431.8 289 71.6
SalBow7G4834 Salvia bowleyana HOM05D006754 ORTHO05D008403 9.4e-119 430.6 289 71.6
SalBow7G2225 Salvia bowleyana HOM05D006754 ORTHO05D008403 2.1e-118 429.5 289 71.3
Aqoxy2G02260 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 7.9e-118 427.6 289 72.3
CsaV3_1G034490 Cucumis sativus L. HOM05D006754 ORTHO05D008403 1.8e-117 426.4 289 69.2
Glyma.08G227600 Glycine max HOM05D006754 ORTHO05D008403 3.0e-117 425.6 288 70.5
Eucgr.B02322 Eucalyptus grandis HOM05D006754 ORTHO05D008403 8.8e-117 424.1 288 70.5
FAN16G0425 Fragaria x ananassa HOM05D006754 ORTHO05D008403 8.8e-117 424.1 283 72.1
HanXRQChr05g0135011 Helianthus annuus HOM05D006754 ORTHO05D008403 1.5e-116 423.3 287 69.3
Manes.01G171100 Manihot esculenta HOM05D006754 ORTHO05D008403 1.5e-116 423.3 290 71.0
Gohir.A05G094100 Gossypium hirsutum HOM05D006754 ORTHO05D008403 2.6e-116 422.5 289 70.6
DCAR_005953 Daucus carota HOM05D006754 ORTHO05D008403 4.3e-116 421.8 288 68.4
Glyma.15G221700 Glycine max HOM05D006754 ORTHO05D008403 5.7e-116 421.4 288 69.8
Lsat_1_v5_gn_8_73421 Lactuca sativa HOM05D006754 ORTHO05D008403 9.7e-116 420.6 289 68.9
THA.LOC104799439 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 9.7e-116 420.6 289 68.9
Gorai.009G097800 Gossypium raimondii HOM05D006754 ORTHO05D008403 1.3e-115 420.2 289 70.2
Medtr8g044030 Medicago truncatula HOM05D006754 ORTHO05D008403 2.2e-115 419.5 288 68.8
AL8G35980 Arabidopsis lyrata HOM05D006754 ORTHO05D008403 1.4e-114 416.8 288 67.7
Prupe.6G072500 Prunus persica HOM05D006754 ORTHO05D008403 1.4e-114 416.8 270 73.3
unitig_37.g12673 Utricularia gibba HOM05D006754 ORTHO05D008403 4.1e-114 415.2 289 68.2
EL10Ac7g16047 Beta vulgaris HOM05D006754 ORTHO05D008403 6.9e-114 414.5 289 68.9
VMungo1127G1194 Vigna mungo HOM05D006754 ORTHO05D008403 9.1e-114 414.1 288 69.1
Sc12g0001320 Simmondsia chinensis HOM05D006754 ORTHO05D008403 1.5e-113 413.3 289 69.2
Thhalv10015639m.g Eutrema salsugineum HOM05D006754 ORTHO05D008403 2.6e-113 412.5 288 67.4
Psat4g178480 Pisum sativum HOM05D006754 ORTHO05D008403 2.6e-113 412.5 288 68.4
AT5G59500 Arabidopsis thaliana HOM05D006754 ORTHO05D008403 4.5e-113 411.8 288 66.0
CANSAT56G3630 Cannabis sativa HOM05D006754 ORTHO05D008403 5.9e-113 411.4 289 69.6
Phvul.011G187300 Phaseolus vulgaris HOM05D006754 ORTHO05D008403 1.3e-112 410.2 288 69.8
Lj3g0006516 Lotus japonicus HOM05D006754 ORTHO05D008403 2.2e-112 409.5 288 68.8
Ca_24122_v3 Cicer arietinum L. HOM05D006754 ORTHO05D008403 2.9e-112 409.1 288 67.4
Sp6g21200 Schrenkiella parvula HOM05D006754 ORTHO05D008403 6.5e-112 407.9 288 66.3
PSO339G3555 Papaver somniferum HOM05D006754 ORTHO05D008403 1.4e-111 406.8 289 67.8
Carub.0008s2018 Capsella rubella HOM05D006754 ORTHO05D008403 3.2e-111 405.6 288 66.3
CARHR285870 Cardamine hirsuta HOM05D006754 ORTHO05D008403 5.5e-111 404.8 288 65.6
Ah.15g097770 Amaranthus hybridus HOM05D006754 ORTHO05D008403 7.2e-111 404.4 289 66.4
Dinv22095 Davidia involucrata HOM05D006754 ORTHO05D008403 9.4e-111 404.1 249 76.7
CDE04G0725 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 1.2e-110 403.7 289 65.7
ClCG03G001330 Citrullus lanatus HOM05D006754 ORTHO05D008403 1.2e-110 403.7 270 70.7
PSO063G1099 Papaver somniferum HOM05D006754 ORTHO05D008403 1.6e-110 403.3 289 66.8
BcaB08g36252 Brassica carinata HOM05D006754 ORTHO05D008403 3.6e-110 402.1 288 65.3
BraA10t43752Z Brassica rapa HOM05D006754 ORTHO05D008403 4.7e-110 401.7 288 65.3
arahy.Tifrunner.gnm1.ann1.826T7K Arachis hypogaea HOM05D006754 ORTHO05D008403 6.1e-110 401.4 288 67.7
AUR62001757 Chenopodium quinoa HOM05D006754 ORTHO05D008403 6.1e-110 401.4 291 67.0
Aa31LG1G11840 Aethionema arabicum HOM05D006754 ORTHO05D008403 7.9e-110 401.0 290 65.5
BcaC04g19764 Brassica carinata HOM05D006754 ORTHO05D008403 7.9e-110 401.0 288 65.3
C09p51900 Brassica napus HOM05D006754 ORTHO05D008403 7.9e-110 401.0 288 65.3
BolC9t58053H Brassica oleracea HOM05D006754 ORTHO05D008403 7.9e-110 401.0 288 65.3
CDE07G0060 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 3.0e-109 399.1 282 64.5
A10p16710 Brassica napus HOM05D006754 ORTHO05D008403 3.9e-109 398.7 288 64.9
Sed0002230 Sechium edule HOM05D006754 ORTHO05D008403 2.6e-108 396.0 276 68.1
THA.LOC104814881 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 5.7e-108 394.8 293 65.2
AUR62009543 Chenopodium quinoa HOM05D006754 ORTHO05D008403 1.3e-107 393.7 291 66.3
FAN21G1313 Fragaria x ananassa HOM05D006754 ORTHO05D008403 3.7e-107 392.1 328 61.3
MBI14_g12133_MAGBIO Magnolia biondii HOM05D006754 ORTHO05D008403 7.0e-106 387.9 287 66.2
Duzib168G0850 Durio zibethinus HOM05D006754 ORTHO05D008403 7.7e-105 384.4 245 73.9
SGA_v2.0_scaffold51G18718 Striga asiatica HOM05D006754 ORTHO05D008403 1.4e-101 373.6 282 60.6
ATR0752G045 Amborella trichopoda HOM05D006754 ORTHO05D008403 3.0e-101 372.5 285 62.8
Dinv09390 Davidia involucrata HOM05D006754 ORTHO05D008403 1.8e-98 363.2 218 78.0
Oeu004165.1 Olea europaea HOM05D006754 ORTHO05D008403 1.1e-95 354.0 214 77.1
Sed0016816 Sechium edule HOM05D006754 ORTHO05D008403 4.0e-93 345.5 289 59.9
Gohir.D05G094600 Gossypium hirsutum HOM05D006754 ORTHO05D008403 1.7e-83 313.5 216 69.0
Lalb_Chr01g0007611 Lupinus albus HOM05D006754 ORTHO05D008403 1.2e-78 297.4 289 53.6
ECA236G3563 Erigeron canadensis HOM05D006754 ORTHO05D008403 2.5e-63 246.5 149 73.8
TPR.G35751 Trifolium pratense HOM05D006754 ORTHO05D008403 4.4e-60 235.7 288 46.9
GSVIVG01024926001 Vitis vinifera HOM05D006754 ORTHO05D008403 8.6e-56 221.5 289 44.3
Pp3c1_41830 Physcomitrium patens HOM05D006754 ORTHO05D008403 6.2e-54 215.3 291 38.5
Mapoly0044s0017 Marchantia polymorpha HOM05D006754 ORTHO05D008403 2.6e-52 209.9 291 39.2
AagrBONN_evm.TU.Sc2ySwM_368.2585 Anthoceros agrestis HOM05D006754 ORTHO05D008403 4.1e-50 202.6 298 39.6
C03p13670 Brassica napus HOM05D006754 ORTHO05D008403 1.5e-44 184.1 131 68.7
BolC3t13816H Brassica oleracea HOM05D006754 ORTHO05D008403 1.5e-44 184.1 131 68.7
HPP92_027965 Vanilla planifolia HOM05D006754 ORTHO05D008403 1.5e-44 184.1 174 52.9
SMO356G0015 Selaginella moellendorffii HOM05D006754 ORTHO05D008403 2.0e-44 183.7 270 37.8
Nn4g26458 Nelumbo nucifera HOM05D006754 ORTHO05D008403 9.3e-42 174.9 119 69.7
MD11G1097300 Malus domestica HOM05D006754 ORTHO05D008403 8.1e-38 161.8 199 48.2
BcaB05g22514 Brassica carinata HOM05D006754 ORTHO05D008403 1.1e-34 151.4 157 50.3
Dinv06263 Davidia involucrata HOM05D006754 ORTHO05D008403 4.3e-31 139.4 97 72.2
CBR_g46210 Chara braunii HOM05D006754 ORTHO05D008403 2.8e-30 136.7 279 30.1
Aqoxy2G02265 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 3.4e-28 129.8 101 62.4
SEGI_33641 Sequoiadendron giganteum HOM05D006754 ORTHO05D008403 2.2e-27 127.1 207 36.2
HPP92_001678 Vanilla planifolia HOM05D006754 ORTHO05D008403 1.9e-23 114.0 112 52.7
BcaC03g14007 Brassica carinata HOM05D006754 ORTHO05D008403 1.4e-10 71.2 94 46.8
C02p12450 Brassica napus HOM05D006754 ORTHO05D008403 1.4e-10 71.2 92 47.8
Cre01.g049750 Chlamydomonas reinhardtii HOM05D006754 ORTHO05D008403 1.2e-09 68.2 212 29.2


User provided reference genes

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