Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007108g0040 Nicotiana tabacum HOM05D021150 ORTHO05D002375 5.5e-56 221.1 143 100.0
PGSC0003DMG400030843 Solanum tuberosum HOM05D021150 ORTHO05D002375 2.2e-20 102.8 150 57.3
Solyc04g074780.4 Solanum lycopersicum HOM05D021150 ORTHO05D002375 4.1e-19 98.6 149 55.0
Sopen04g029740 Solanum pennellii HOM05D021150 ORTHO05D002375 8.6e-17 90.9 168 48.8
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 4.3e-16 88.6 156 53.8
COL.COLO4_11993 Corchorus olitorius HOM05D004728 ORTHO05D002375 9.9e-13 77.4 96 60.4
Gohir.A02G076900 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.1e-11 73.9 96 60.4
Gohir.D02G084100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.1e-11 73.9 110 52.7
Gorai.005G094700 Gossypium raimondii HOM05D004728 ORTHO05D002375 1.9e-11 73.2 96 59.4
Nitab4.5_0003374g0050 Nicotiana tabacum HOM05D021150 ORTHO05D002375 3.2e-11 72.4 37 97.3
Lj4A728T44 Lonicera japonica HOM05D004728 ORTHO05D002375 7.1e-11 71.2 108 51.9
Duzib041G0412 Durio zibethinus HOM05D004728 ORTHO05D002375 9.2e-11 70.9 96 60.4
Nitab4.5_0002377g0020 Nicotiana tabacum HOM05D021150 ORTHO05D002375 4.6e-10 68.6 37 91.9
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 3.0e-09 65.9 108 50.0
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 3.0e-09 65.9 98 57.1
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 3.9e-09 65.5 118 52.5
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 8.6e-09 64.3 147 44.9
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 2.5e-08 62.8 97 50.5
Gorai.009G233200 Gossypium raimondii HOM05D004728 ORTHO05D002375 3.3e-08 62.4 96 57.3
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 4.3e-08 62.0 97 56.7
Lj4A728G42 Lonicera japonica HOM05D004728 ORTHO05D002375 4.3e-08 62.0 97 33.0
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 5.6e-08 61.6 97 57.7
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 2.1e-07 59.7 96 51.0
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 2.1e-07 59.7 97 49.5
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 3.6e-07 58.9 138 44.9
Migut.C01161 Erythranthe guttata HOM05D004728 ORTHO05D002375 6.2e-07 58.2 100 50.0
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 6.2e-07 58.2 97 44.3
HanXRQChr09g0250741 Helianthus annuus HOM05D004728 ORTHO05D002375 6.2e-07 58.2 97 47.4
Potri.002G101600 Populus trichocarpa HOM05D004728 ORTHO05D002375 6.2e-07 58.2 94 57.4
Lj4A728T43 Lonicera japonica HOM05D004728 ORTHO05D002375 8.1e-07 57.8 97 34.0
Hund14099 Selenicereus undatus HOM05D004728 ORTHO05D002375 1.1e-06 57.4 97 60.8
SGA_v2.0_scaffold52G18993 Striga asiatica HOM05D004728 ORTHO05D002375 1.1e-06 57.4 98 55.1
MSTRG.1471 Avicennia marina HOM05D004728 ORTHO05D002375 1.8e-06 56.6 96 52.1
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 2.4e-06 56.2 99 51.5
Duzib093G1766 Durio zibethinus HOM05D004728 ORTHO05D002375 2.4e-06 56.2 79 67.1
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 2.4e-06 56.2 109 52.3
Actinidia29600 Actinidia chinensis HOM05D004728 ORTHO05D002375 3.1e-06 55.8 99 51.5
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 3.1e-06 55.8 103 44.7
DCAR_003461 Daucus carota HOM05D004728 ORTHO05D002375 4.0e-06 55.5 103 34.0
Duzib116G0314 Durio zibethinus HOM05D004728 ORTHO05D002375 4.0e-06 55.5 97 52.6
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 4.0e-06 55.5 100 34.0
Actinidia33119 Actinidia chinensis HOM05D004728 ORTHO05D002375 5.2e-06 55.1 97 55.7
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 5.2e-06 55.1 97 50.5
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 5.2e-06 55.1 98 55.1
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 5.2e-06 55.1 98 55.1
Gohir.A05G223000 Gossypium hirsutum HOM05D004728 ORTHO05D002375 5.2e-06 55.1 105 52.4
HanXRQChr17g0561041 Helianthus annuus HOM05D004728 ORTHO05D002375 5.2e-06 55.1 97 36.1
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 5.2e-06 55.1 97 51.5
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 6.8e-06 54.7 130 43.1
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 6.8e-06 54.7 97 38.1
Gohir.A05G223100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 6.8e-06 54.7 97 49.5
MSTRG.25397 Avicennia marina HOM05D004728 ORTHO05D002375 8.9e-06 54.3 100 52.0
EL10Ac1g01137 Beta vulgaris HOM05D004728 ORTHO05D002375 8.9e-06 54.3 103 34.0
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 8.9e-06 54.3 98 54.1


User provided reference genes

Program Settings