Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007104g0100 Nicotiana tabacum HOM05D007792 ORTHO05D009931 3.9e-54 214.5 107 100.0
Oeu028775.1 Olea europaea HOM05D007792 ORTHO05D009931 8.6e-38 160.2 91 87.9
Oeu058366.1 Olea europaea HOM05D007792 ORTHO05D009931 8.6e-38 160.2 91 87.9
DCAR_032507 Daucus carota HOM05D007792 ORTHO05D009931 6.9e-35 150.6 91 82.4
SalBow1G1024 Salvia bowleyana HOM05D007792 ORTHO05D009931 2.6e-34 148.7 91 81.3
HanXRQChr01g0020291 Helianthus annuus HOM05D007792 ORTHO05D009931 7.6e-34 147.1 87 85.1
HanXRQChr04g0094291 Helianthus annuus HOM05D007792 ORTHO05D009931 7.6e-34 147.1 87 85.1
HanXRQChr10g0283611 Helianthus annuus HOM05D007792 ORTHO05D009931 7.6e-34 147.1 87 85.1
HanXRQChr10g0284301 Helianthus annuus HOM05D007792 ORTHO05D009931 7.6e-34 147.1 87 85.1
HanXRQChr10g0318141 Helianthus annuus HOM05D007792 ORTHO05D009931 7.6e-34 147.1 87 85.1
HanXRQChr11g0326891 Helianthus annuus HOM05D007792 ORTHO05D009931 7.6e-34 147.1 87 85.1
HanXRQCPg0580101 Helianthus annuus HOM05D007792 ORTHO05D009931 7.6e-34 147.1 87 85.1
HanXRQChr04g0095111 Helianthus annuus HOM05D007792 ORTHO05D009931 9.9e-34 146.7 87 83.9
HanXRQChr02g0052571 Helianthus annuus HOM05D007792 ORTHO05D009931 1.1e-32 143.3 87 82.8
Gohir.D01G101995 Gossypium hirsutum HOM05D007792 ORTHO05D009931 1.5e-29 132.9 79 86.1
Gohir.D09G044333 Gossypium hirsutum HOM05D007792 ORTHO05D009931 1.5e-29 132.9 79 86.1
PGR111G0084 Punica granatum HOM05D007792 ORTHO05D009931 1.5e-29 132.9 78 85.9
Gohir.A11G230404 Gossypium hirsutum HOM05D007792 ORTHO05D009931 7.3e-29 130.6 79 84.8
Gohir.A12G229400 Gossypium hirsutum HOM05D007792 ORTHO05D009931 7.3e-29 130.6 79 83.5
PSO548G0123 Papaver somniferum HOM05D007792 ORTHO05D009931 9.6e-29 130.2 79 83.5
Nn021s41529 Nelumbo nucifera HOM05D007792 ORTHO05D009931 2.1e-28 129.0 82 80.5
SGA_v2.0_scaffold479G52248 Striga asiatica HOM05D007792 ORTHO05D009931 6.2e-28 127.5 91 71.4
CAN.G1148.9 Capsicum annuum HOM05D007792 ORTHO05D009931 5.3e-27 124.4 80 81.2
CAN.G2018.13 Capsicum annuum HOM05D007792 ORTHO05D009931 5.3e-27 124.4 80 81.2
CAN.G438.83 Capsicum annuum HOM05D007792 ORTHO05D009931 5.3e-27 124.4 80 81.2
MELO3C027088.2 Cucumis melo HOM05D007792 ORTHO05D009931 5.3e-27 124.4 90 71.1
MELO3C028023.2 Cucumis melo HOM05D007792 ORTHO05D009931 5.3e-27 124.4 90 71.1
MELO3C028123.2 Cucumis melo HOM05D007792 ORTHO05D009931 5.3e-27 124.4 90 71.1
Gorai.011G046100 Gossypium raimondii HOM05D007792 ORTHO05D009931 1.2e-26 123.2 79 79.7
RcHm_v2.0_CPg0502001 Rosa chinensis HOM05D007792 ORTHO05D009931 2.0e-26 122.5 79 77.2
Gohir.D01G169022 Gossypium hirsutum HOM05D007792 ORTHO05D009931 7.6e-26 120.6 81 75.3
Gohir.A02G053101 Gossypium hirsutum HOM05D007792 ORTHO05D009931 1.3e-25 119.8 79 75.9
Duzib071G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 1.7e-25 119.4 79 79.7
Duzib233G0002 Durio zibethinus HOM05D000274 ORTHO05D002552 1.7e-25 119.4 79 79.7
Duzib237G0004 Durio zibethinus HOM05D000274 ORTHO05D002552 1.7e-25 119.4 79 79.7
Duzib253G0005 Durio zibethinus HOM05D000274 ORTHO05D002552 1.7e-25 119.4 79 79.7
Gohir.D04G084960 Gossypium hirsutum HOM05D007792 ORTHO05D009931 1.7e-25 119.4 79 77.2
Gorai.002G210300 Gossypium raimondii HOM05D007792 ORTHO05D009931 2.2e-25 119.0 75 77.3
Gorai.012G094800 Gossypium raimondii HOM05D007792 ORTHO05D009931 2.2e-25 119.0 79 77.2
Sed0026344 Sechium edule HOM05D007792 ORTHO05D009931 2.2e-25 119.0 79 77.2
Sed0027103 Sechium edule HOM05D007792 ORTHO05D009931 2.2e-25 119.0 79 77.2
Oeu053978.1 Olea europaea HOM05D007792 ORTHO05D009931 1.4e-24 116.3 67 86.6
CARHR282170 Cardamine hirsuta HOM05D007792 ORTHO05D009931 1.9e-24 115.9 79 72.2
AL2G21630 Arabidopsis lyrata HOM05D007792 ORTHO05D009931 5.4e-24 114.4 79 70.9
ATCG00660 Arabidopsis thaliana HOM05D007792 ORTHO05D009931 7.1e-24 114.0 79 70.9
BNapus_Darmor_BZH_scaffold_287p00200 Brassica napus HOM05D007792 ORTHO05D009931 6.0e-23 110.9 79 70.9
C02p43590 Brassica napus HOM05D007792 ORTHO05D009931 6.0e-23 110.9 79 70.9
C06p22950 Brassica napus HOM05D007792 ORTHO05D009931 6.0e-23 110.9 79 70.9
BolSC29t60598H Brassica oleracea HOM05D007792 ORTHO05D009931 6.0e-23 110.9 79 70.9
BolSC47t61086H Brassica oleracea HOM05D007792 ORTHO05D009931 6.0e-23 110.9 79 70.9
BraSC138t45565Z Brassica rapa HOM05D007792 ORTHO05D009931 6.0e-23 110.9 79 70.9
BraSC25t45855Z Brassica rapa HOM05D007792 ORTHO05D009931 6.0e-23 110.9 79 70.9
BraSC58t46432Z Brassica rapa HOM05D007792 ORTHO05D009931 6.0e-23 110.9 79 70.9
BraSC58t46493Z Brassica rapa HOM05D007792 ORTHO05D009931 1.3e-22 109.8 79 69.6
Sed0001088 Sechium edule HOM05D007792 ORTHO05D009931 2.3e-22 109.0 79 74.7
Phvul.002G090500 Phaseolus vulgaris HOM05D007792 ORTHO05D009931 8.7e-22 107.1 80 71.2
BolC6t36199H Brassica oleracea HOM05D007792 ORTHO05D009931 7.4e-21 104.0 79 67.1
Solyc00g500254.1 Solanum lycopersicum HOM05D007792 ORTHO05D010943 1.6e-20 102.8 70 80.0
Glyma.12G232100 Glycine max HOM05D007792 ORTHO05D009931 2.8e-20 102.1 80 67.5
Lalb_Chr07g0192061 Lupinus albus HOM05D007792 ORTHO05D009931 2.8e-20 102.1 80 67.5
Lalb_Chr08g0237911 Lupinus albus HOM05D007792 ORTHO05D009931 2.8e-20 102.1 80 67.5
Nn6g32081 Nelumbo nucifera HOM05D007792 ORTHO05D009931 4.0e-19 98.2 67 76.1
LjContig00318g0025275 Lotus japonicus HOM05D007792 ORTHO05D009931 6.9e-19 97.4 82 62.2
Medtr4g034720 Medicago truncatula HOM05D007792 ORTHO05D009931 6.9e-19 97.4 80 67.5
Glyma.01G201700 Glycine max HOM05D007792 ORTHO05D009931 9.0e-19 97.1 80 63.8
Solyc11g063660.1 Solanum lycopersicum HOM05D007792 ORTHO05D009931 1.7e-17 92.8 48 91.7
Solyc11g063720.1 Solanum lycopersicum HOM05D007792 ORTHO05D009931 1.7e-17 92.8 48 91.7
Solyc00g180440.1 Solanum lycopersicum HOM05D007792 ORTHO05D009931 1.1e-16 90.1 46 93.5
Solyc11g063440.3 Solanum lycopersicum HOM05D007792 ORTHO05D009931 1.4e-16 89.7 48 89.6
Gorai.001G063300 Gossypium raimondii HOM05D007792 ORTHO05D009931 1.6e-15 86.3 79 62.0
arahy.Tifrunner.gnm1.ann1.4Z8JUD Arachis hypogaea HOM05D007792 ORTHO05D009931 3.5e-15 85.1 80 60.0
BolSC29t60477H Brassica oleracea HOM05D007792 ORTHO05D009931 1.3e-14 83.2 57 70.2
BolC2t08921H Brassica oleracea HOM05D007792 ORTHO05D009931 7.4e-13 77.4 55 67.3
Lalb_Chr23g0274331 Lupinus albus HOM05D007792 ORTHO05D009931 7.4e-13 77.4 65 66.2
Sed0005117 Sechium edule HOM05D007792 ORTHO05D009931 2.8e-12 75.5 79 58.2
CiPaw.07G076700 Carya illinoinensis HOM05D007792 ORTHO05D009931 9.0e-11 70.5 71 50.7
Haze_24215 Corylus avellana HOM05D002400 ORTHO05D002568 2.6e-10 68.9 53 60.4
Medtr7g085940 Medicago truncatula HOM05D007792 ORTHO05D009931 1.7e-09 66.2 54 64.8
BolC8t52434H Brassica oleracea HOM05D007792 ORTHO05D009931 1.4e-08 63.2 44 70.5
Eucgr.D02558 Eucalyptus grandis HOM05D007792 ORTHO05D009931 1.9e-08 62.8 41 73.2
Sc09g0009720 Simmondsia chinensis HOM05D007792 ORTHO05D001488 3.2e-08 62.0 34 82.4
Sc22g0003450 Simmondsia chinensis HOM05D002194 ORTHO05D002840 3.5e-07 58.5 34 79.4
Aqoxy2G00943 Aquilegia oxysepala HOM05D007792 ORTHO05D009931 6.0e-07 57.8 46 60.9
SMO244G0037 Selaginella moellendorffii HOM05D004456 ORTHO05D005287 6.0e-07 57.8 62 50.0
SMO281G0018 Selaginella moellendorffii HOM05D004456 ORTHO05D005287 6.0e-07 57.8 62 50.0
TWI60G0757 Tripterygium wilfordii HOM05D004456 ORTHO05D005287 7.9e-07 57.4 62 43.5
C04p42970 Brassica napus HOM05D007792 ORTHO05D009931 1.8e-06 56.2 41 65.9
SMO198G0083 Selaginella moellendorffii HOM05D004456 ORTHO05D005287 1.8e-06 56.2 62 48.4
PRCOL_00003603 Prasinoderma coloniale HOM05D004456 ORTHO05D005287 3.0e-06 55.5 61 49.2
TWI81G0537 Tripterygium wilfordii HOM05D004456 ORTHO05D005287 3.9e-06 55.1 62 46.8
unitig_92.g28171 Utricularia gibba HOM05D004456 ORTHO05D005287 3.9e-06 55.1 62 46.8
CiPaw.01G092700 Carya illinoinensis HOM05D004456 ORTHO05D005287 5.1e-06 54.7 62 45.2
Duzib235G0097 Durio zibethinus HOM05D004456 ORTHO05D005287 5.1e-06 54.7 62 46.8
Hund17691 Selenicereus undatus HOM05D004456 ORTHO05D005287 5.1e-06 54.7 62 45.2
Ah.06g192000 Amaranthus hybridus HOM05D004456 ORTHO05D005287 6.7e-06 54.3 62 45.2
CARHR287410 Cardamine hirsuta HOM05D007792 ORTHO05D009931 6.7e-06 54.3 48 58.3
Migut.M01892 Erythranthe guttata HOM05D004456 ORTHO05D005287 6.7e-06 54.3 62 46.8
Migut.M01926 Erythranthe guttata HOM05D004456 ORTHO05D005287 6.7e-06 54.3 62 46.8
Gohir.D11G338800 Gossypium hirsutum HOM05D004456 ORTHO05D005287 6.7e-06 54.3 62 45.2
Gorai.007G368500 Gossypium raimondii HOM05D004456 ORTHO05D005287 6.7e-06 54.3 62 45.2
Potri.017G119300 Populus trichocarpa HOM05D004456 ORTHO05D005287 6.7e-06 54.3 62 45.2
Sabra17G0098500 Salix brachista HOM05D004456 ORTHO05D005287 6.7e-06 54.3 62 45.2
SalBow7G3040 Salvia bowleyana HOM05D004456 ORTHO05D005287 6.7e-06 54.3 62 45.2
SGA_v2.0_scaffold223G42863 Striga asiatica HOM05D004456 ORTHO05D005287 6.7e-06 54.3 62 45.2
arahy.Tifrunner.gnm1.ann1.H056B9 Arachis hypogaea HOM05D007792 ORTHO05D009931 8.7e-06 53.9 78 46.2
unitig_37.g12076 Utricularia gibba HOM05D004456 ORTHO05D005287 8.7e-06 53.9 62 45.2


User provided reference genes

Program Settings