Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007096g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.3e-102 375.6 185 100.0
Nitab4.5_0002837g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.3e-60 236.9 166 74.1
Nitab4.5_0004512g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.5e-58 229.9 166 72.3
Nitab4.5_0013264g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.5e-55 218.8 148 76.4
Nitab4.5_0002433g0100 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.9e-53 213.0 148 74.3
Nitab4.5_0001840g0090 Nicotiana tabacum HOM05D007931 ORTHO05D010331 9.0e-51 204.1 148 73.0
Nitab4.5_0005181g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.1e-43 180.6 127 75.6
Nitab4.5_0003063g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.2e-41 172.9 127 71.7
Nitab4.5_0001005g0120 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.1e-39 166.4 109 79.8
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 7.4e-37 157.9 141 54.6
PGSC0003DMG400030025 Solanum tuberosum HOM05D007931 ORTHO05D010331 1.7e-36 156.8 136 53.7
Nitab4.5_0010531g0070 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.9e-33 146.0 124 64.5
Nitab4.5_0000265g0090 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.4e-29 132.1 142 52.1
Nitab4.5_0002199g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.4e-29 132.1 119 49.6
Nitab4.5_0000016g0590 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.7e-28 129.0 115 60.9
Nitab4.5_0003244g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.6e-26 123.6 139 43.2
Nitab4.5_0008942g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.0e-26 123.2 71 85.9
Nitab4.5_0008257g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.3e-25 120.6 71 87.3
Nitab4.5_0003766g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 8.5e-25 117.9 107 65.4
Nitab4.5_0004037g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 4.0e-22 109.0 110 45.5
PGSC0003DMG400030140 Solanum tuberosum HOM05D007931 ORTHO05D010331 5.7e-21 105.1 80 60.0
Nitab4.5_0000128g0350 Nicotiana tabacum HOM05D007931 ORTHO05D010331 7.5e-21 104.8 121 44.6
Nitab4.5_0003727g0050 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.3e-20 104.0 101 55.4
Sopen02g028840 Solanum pennellii HOM05D007931 ORTHO05D010331 1.1e-19 100.9 70 74.3
Nitab4.5_0000871g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.8e-19 100.1 162 38.3
Sopen10g023470 Solanum pennellii HOM05D007931 ORTHO05D010331 1.3e-17 94.0 85 56.5
Solyc11g068410.1 Solanum lycopersicum HOM05D007931 ORTHO05D010331 2.2e-17 93.2 68 67.6
Nitab4.5_0003161g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.1e-16 90.9 129 41.1
Nitab4.5_0002082g0020 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.7e-15 86.3 131 38.2
Nitab4.5_0001297g0070 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.4e-14 84.0 72 59.7
Nitab4.5_0000075g0220 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.0e-14 82.8 79 54.4
Nitab4.5_0003032g0060 Nicotiana tabacum HOM05D007931 ORTHO05D014660 9.8e-13 77.8 66 62.1
Solyc08g067650.2 Solanum lycopersicum HOM05D007931 ORTHO05D010331 1.3e-12 77.4 116 43.1
Nitab4.5_0000780g0060 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.2e-12 76.6 84 50.0
Nitab4.5_0006590g0040 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.1e-11 72.8 116 36.2
Nitab4.5_0000055g0280 Nicotiana tabacum HOM05D007931 ORTHO05D010331 9.1e-11 71.2 57 59.6
Nitab4.5_0005933g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.9e-10 68.6 67 53.7
Nitab4.5_0002698g0150 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.0e-09 67.8 78 42.3
Nitab4.5_0000760g0010 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.3e-09 66.6 75 41.3
Nitab4.5_0003434g0110 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.3e-09 66.6 76 42.1
EL10Ac5g12187 Beta vulgaris HOM05D000003 ORTHO05D000006 2.9e-09 66.2 126 28.6
EL10Ac7g16695 Beta vulgaris HOM05D000003 ORTHO05D000006 5.0e-09 65.5 139 27.3
PGSC0003DMG400040885 Solanum tuberosum HOM05D007931 ORTHO05D010331 6.5e-09 65.1 51 68.6
Solyc02g084031.1 Solanum lycopersicum HOM05D007931 ORTHO05D000006 8.6e-09 64.7 48 68.8
FvH4_5g21911 Fragaria vesca HOM05D000003 ORTHO05D000022 1.1e-08 64.3 120 32.5
Peaxi162Scf00457g00055 Petunia axillaris HOM05D007931 ORTHO05D010331 2.5e-08 63.2 67 47.8
FvH4_3g19950 Fragaria vesca HOM05D002732 ORTHO05D002955 3.2e-08 62.8 94 34.0
Sopen08g021590 Solanum pennellii HOM05D007931 ORTHO05D010331 3.2e-08 62.8 66 51.5
Nitab4.5_0002239g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 7.2e-08 61.6 75 41.3
Sed0009635 Sechium edule HOM05D015284 ORTHO05D000167 7.2e-08 61.6 80 37.5
Solyc02g032630.2 Solanum lycopersicum HOM05D007931 ORTHO05D010331 7.2e-08 61.6 79 45.6
Nitab4.5_0000016g0560 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.2e-07 60.8 37 75.7
Atru.chr3.1147 Acer truncatum HOM05D000003 ORTHO05D000167 2.1e-07 60.1 97 37.1
PSO832G3082 Papaver somniferum HOM05D007919 ORTHO05D006738 3.6e-07 59.3 96 37.5
Nitab4.5_0003727g0070 Nicotiana tabacum HOM05D007931 ORTHO05D010331 6.1e-07 58.5 35 77.1
Sed0016476 Sechium edule HOM05D024375 ORTHO05D000167 6.1e-07 58.5 122 28.7
Ah.02g115360 Amaranthus hybridus HOM05D003152 ORTHO05D004094 8.0e-07 58.2 147 27.2
FvH4_6g42141 Fragaria vesca HOM05D000003 ORTHO05D000022 8.0e-07 58.2 102 32.4
BraA01t00376Z Brassica rapa HOM05D001239 ORTHO05D000925 1.0e-06 57.8 90 37.8
Peaxi162Scf00004g00093 Petunia axillaris HOM05D007931 ORTHO05D010331 1.0e-06 57.8 59 52.5
Prupe.1G162400 Prunus persica HOM05D000003 ORTHO05D000022 1.4e-06 57.4 94 33.0
Atru.chr11.481 Acer truncatum HOM05D000003 ORTHO05D000167 1.8e-06 57.0 113 31.0
Nitab4.5_0009159g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.8e-06 57.0 53 47.2
Prupe.8G078100 Prunus persica HOM05D027201 ORTHO05D010331 1.8e-06 57.0 128 27.3
RcHm_v2.0_Chr5g0021171 Rosa chinensis HOM05D003515 ORTHO05D004347 1.8e-06 57.0 114 28.9
C06p10370 Brassica napus HOM05D001239 ORTHO05D000925 2.3e-06 56.6 90 37.8
Ciclev10013872m.g Citrus clementina HOM05D000003 ORTHO05D000167 2.3e-06 56.6 114 33.3
Solyc04g010150.1 Solanum lycopersicum HOM05D007931 ORTHO05D010331 2.3e-06 56.6 59 55.9
Solyc04g063330.1 Solanum lycopersicum HOM05D007931 ORTHO05D010331 2.3e-06 56.6 59 45.8
Cc01_g03870 Coffea canephora HOM05D007931 ORTHO05D010331 3.0e-06 56.2 147 24.5
Atru.chr10.149 Acer truncatum HOM05D000003 ORTHO05D000004 6.8e-06 55.1 97 34.0
Atru.chr6.1438 Acer truncatum HOM05D000003 ORTHO05D000167 6.8e-06 55.1 111 38.7
PSO478G4994 Papaver somniferum HOM05D007919 ORTHO05D006738 6.8e-06 55.1 111 29.7
RcHm_v2.0_Chr1g0356971 Rosa chinensis HOM05D000003 ORTHO05D000022 6.8e-06 55.1 93 32.3
Sopen02g012250 Solanum pennellii HOM05D000004 ORTHO05D000002 6.8e-06 55.1 48 60.4
PGSC0003DMG400002205 Solanum tuberosum HOM05D000927 ORTHO05D000850 6.8e-06 55.1 42 69.0
Sed0009227 Sechium edule HOM05D000003 ORTHO05D000167 8.8e-06 54.7 105 25.7
Sopen11g020420 Solanum pennellii HOM05D004800 ORTHO05D010331 8.8e-06 54.7 68 47.1


User provided reference genes

Program Settings