Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 2.6e-49 198.4 98 100.0
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 3.0e-45 184.9 98 92.9
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 3.0e-45 184.9 98 92.9
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 3.0e-45 184.9 98 92.9
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 2.5e-44 181.8 98 90.8
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 1.7e-40 169.1 94 90.4
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 2.9e-40 168.3 98 81.6
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 2.5e-39 165.2 98 79.6
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 5.5e-39 164.1 97 79.4
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 7.2e-39 163.7 98 79.6
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 7.2e-39 163.7 98 79.6
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 9.4e-39 163.3 96 80.2
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 9.4e-39 163.3 97 80.4
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 2.1e-38 162.2 93 83.9
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 4.6e-38 161.0 98 81.6
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 4.6e-38 161.0 96 79.2
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 6.1e-38 160.6 98 76.5
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 6.1e-38 160.6 98 77.6
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.4e-37 159.5 96 78.1
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 1.4e-37 159.5 99 80.8
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 1.8e-37 159.1 98 78.6
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 2.3e-37 158.7 97 78.4
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 3.0e-37 158.3 101 74.3
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 3.0e-37 158.3 101 74.3
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 3.0e-37 158.3 101 74.3
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 3.0e-37 158.3 101 76.2
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 3.9e-37 157.9 98 77.6
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 5.1e-37 157.5 97 78.4
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 8.8e-37 156.8 98 76.5
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 1.1e-36 156.4 98 78.6
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 1.5e-36 156.0 96 77.1
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 2.0e-36 155.6 98 76.5
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 2.0e-36 155.6 97 77.3
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.5e-36 155.2 101 73.3
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 3.3e-36 154.8 101 78.2
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 3.3e-36 154.8 96 76.0
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 4.3e-36 154.5 98 78.6
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 1.3e-35 152.9 96 77.1
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 1.7e-35 152.5 93 75.3
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 2.2e-35 152.1 97 76.3
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 2.8e-35 151.8 92 79.3
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 2.8e-35 151.8 95 76.8
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 3.7e-35 151.4 97 76.3
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 6.3e-35 150.6 99 76.8
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 8.2e-35 150.2 125 64.0
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 1.1e-34 149.8 92 78.3
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 1.8e-34 149.1 91 73.6
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 2.4e-34 148.7 98 78.6
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 2.4e-34 148.7 97 76.3
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 2.4e-34 148.7 99 73.7
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 3.1e-34 148.3 101 74.3
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 4.1e-34 147.9 96 77.1
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 5.3e-34 147.5 98 69.4
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 5.3e-34 147.5 99 75.8
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 6.9e-34 147.1 97 76.3
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 6.9e-34 147.1 97 76.3
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 6.9e-34 147.1 97 76.3
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 6.9e-34 147.1 92 78.3
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 1.2e-33 146.4 96 70.8
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 1.2e-33 146.4 91 75.8
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 1.5e-33 146.0 97 71.1
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 2.6e-33 145.2 97 71.1
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 2.6e-33 145.2 92 75.0
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 3.4e-33 144.8 96 72.9
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 4.5e-33 144.4 97 72.2
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 4.5e-33 144.4 98 69.4
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 4.5e-33 144.4 85 81.2
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 5.9e-33 144.1 98 68.4
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 1.7e-32 142.5 97 74.2
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 1.7e-32 142.5 95 70.5
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 2.2e-32 142.1 95 73.7
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 2.9e-32 141.7 96 67.7
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 3.8e-32 141.4 94 68.1
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 5.0e-32 141.0 103 67.0
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 5.0e-32 141.0 91 70.3
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 1.1e-31 139.8 98 68.4
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 1.4e-31 139.4 98 69.4
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 3.2e-31 138.3 98 67.3
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 3.2e-31 138.3 98 68.4
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 5.5e-31 137.5 95 71.6
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 1.2e-30 136.3 98 65.3
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 1.2e-30 136.3 80 80.0
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 1.2e-30 136.3 80 82.5
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 1.6e-30 136.0 98 66.3
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 1.6e-30 136.0 98 66.3
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 1.6e-30 136.0 98 66.3
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 1.6e-30 136.0 98 66.3
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 2.7e-30 135.2 104 67.3
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 3.6e-30 134.8 98 65.3
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 4.7e-30 134.4 101 72.3
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 1.4e-29 132.9 89 74.2
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 1.1e-28 129.8 77 77.9
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 1.5e-28 129.4 80 76.2
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 2.0e-28 129.0 93 64.5
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 2.0e-28 129.0 93 71.0
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 2.6e-28 128.6 99 65.7
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 3.3e-28 128.3 79 74.7
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 5.7e-28 127.5 99 65.7
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 5.7e-28 127.5 99 64.6
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 5.7e-28 127.5 99 65.7
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 7.4e-28 127.1 99 64.6
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 1.3e-27 126.3 99 63.6
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 1.7e-24 115.9 81 66.7
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.2e-24 115.5 105 60.0
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 1.5e-23 112.8 84 63.1
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 8.0e-22 107.1 62 82.3
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 4.0e-21 104.8 79 60.8
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 8.8e-21 103.6 90 58.9
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 4.1e-18 94.7 89 50.6
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 7.0e-18 94.0 72 61.1
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 7.7e-17 90.5 89 52.8
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 5.0e-16 87.8 115 45.2
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 1.0e-13 80.1 90 48.9
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 2.0e-12 75.9 66 60.6
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 3.4e-12 75.1 45 73.3
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 3.7e-11 71.6 74 45.9
AUR62035175 Chenopodium quinoa HOM05D006709 ORTHO05D008329 1.6e-09 66.2 39 84.6
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.0e-08 63.5 37 73.0
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 9.4e-07 57.0 55 50.9


User provided reference genes

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