Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007044g0010 Nicotiana tabacum HOM05D000002 ORTHO05D000001 7.5e-40 166.8 87 100.0
Sopen11g003490 Solanum pennellii HOM05D000002 ORTHO05D000001 8.1e-18 93.6 68 63.2
Sopen12g023510 Solanum pennellii HOM05D000002 ORTHO05D000001 8.1e-18 93.6 68 63.2
Sopen05g011750 Solanum pennellii HOM05D000002 ORTHO05D000001 4.0e-17 91.3 68 61.8
Sopen02g010030 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-16 89.7 68 63.2
Sopen04g008990 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-16 89.7 68 60.3
Sopen06g017500 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-16 87.4 68 58.8
Sopen12g010660 Solanum pennellii HOM05D000002 ORTHO05D000001 9.9e-16 86.7 68 57.4
Sopen04g009020 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-15 85.9 68 57.4
Migut.F01917 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.8e-15 84.7 69 56.5
Nitab4.5_0000905g0060 Nicotiana tabacum HOM05D000002 ORTHO05D000001 3.8e-15 84.7 70 58.6
Sopen06g032630 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-14 82.8 68 58.8
CAN.G134.31 Capsicum annuum HOM05D000085 ORTHO05D006184 3.2e-14 81.6 77 49.4
Migut.J01156 Erythranthe guttata HOM05D000002 ORTHO05D000001 4.2e-14 81.3 69 50.7
Gorai.013G092800 Gossypium raimondii HOM05D000002 ORTHO05D000001 2.7e-13 78.6 75 49.3
Sopen08g005830 Solanum pennellii HOM05D001396 ORTHO05D000001 2.7e-13 78.6 69 53.6
Migut.F01590 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.5e-13 78.2 69 53.6
Migut.H01198 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.5e-13 78.2 69 53.6
Nitab4.5_0001654g0030 Nicotiana tabacum HOM05D000002 ORTHO05D000001 3.5e-13 78.2 65 58.5
Sopen01g029710 Solanum pennellii HOM05D000002 ORTHO05D000001 3.5e-13 78.2 69 52.2
CAN.G741.25 Capsicum annuum HOM05D013392 ORTHO05D000001 7.8e-13 77.0 53 66.0
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 1.0e-12 76.6 67 53.7
Hma1.2p1_0602F.1_g187610 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.3e-12 76.3 71 50.7
Sopen08g005850 Solanum pennellii HOM05D001396 ORTHO05D000001 1.3e-12 76.3 69 49.3
Sopen01g012220 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-12 75.5 61 55.7
Rhsim05G0182900 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.0e-12 75.1 69 49.3
Sopen03g025020 Solanum pennellii HOM05D007487 ORTHO05D008561 3.0e-12 75.1 78 47.4
Atru.chr7.838 Acer truncatum HOM05D000002 ORTHO05D000001 3.9e-12 74.7 67 56.7
Hma1.2p1_1940F.1_g308370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.9e-12 74.7 66 56.1
Peaxi162Scf00237g00226 Petunia axillaris HOM05D000002 ORTHO05D000001 3.9e-12 74.7 57 61.4
Sopen11g022270 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-12 74.7 56 60.7
SHI23044 Sapria himalayana HOM05D000002 ORTHO05D000001 5.1e-12 74.3 62 54.8
Sopen12g009430 Solanum pennellii HOM05D008648 ORTHO05D000001 5.1e-12 74.3 61 54.1
CAN.G1447.12 Capsicum annuum HOM05D000011 ORTHO05D001721 8.7e-12 73.6 67 50.7
Eucgr.H00940 Eucalyptus grandis HOM05D000002 ORTHO05D000001 1.1e-11 73.2 67 47.8
Sopen10g014150 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-11 72.8 61 59.0
Hma1.2p1_0577F.1_g182200 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.5e-11 72.0 70 50.0
Nn8g39601 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.3e-11 71.2 65 53.8
Nitab4.5_0000485g0090 Nicotiana tabacum HOM05D000002 ORTHO05D000001 4.3e-11 71.2 69 46.4
Actinidia35992 Actinidia chinensis HOM05D000002 ORTHO05D000001 7.3e-11 70.5 64 48.4
ECA234G2692 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.6e-11 70.1 79 48.1
Psat2g152960 Pisum sativum HOM05D000002 ORTHO05D000001 9.6e-11 70.1 66 50.0
Psat6g102280 Pisum sativum HOM05D000002 ORTHO05D000001 9.6e-11 70.1 66 50.0
Sopen04g005340 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-10 69.7 69 55.1
VMungo0540G0563 Vigna mungo HOM05D000002 ORTHO05D000001 1.6e-10 69.3 66 48.5
Lj2g0024035 Lotus japonicus HOM05D000002 ORTHO05D000001 2.1e-10 68.9 64 50.0
Atru.chr4.3156 Acer truncatum HOM05D000002 ORTHO05D000001 2.8e-10 68.6 68 50.0
Psat7g134120 Pisum sativum HOM05D000002 ORTHO05D000001 2.8e-10 68.6 66 48.5
TAR099G0005 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.8e-10 68.6 70 41.4
VMungo1309G3040 Vigna mungo HOM05D000002 ORTHO05D000001 3.6e-10 68.2 66 47.0
Atru.chr6.1164 Acer truncatum HOM05D000002 ORTHO05D000001 6.2e-10 67.4 68 47.1
Atru.chr6.233 Acer truncatum HOM05D000002 ORTHO05D000001 6.2e-10 67.4 68 48.5
CSS0039053 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.2e-10 67.4 62 50.0
CSS0045539 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.2e-10 67.4 62 50.0
Eucgr.E02344 Eucalyptus grandis HOM05D000002 ORTHO05D000001 6.2e-10 67.4 70 48.6
TAR301G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 6.2e-10 67.4 68 42.6
Hma1.2p1_0018F.1_g012350 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.1e-10 67.0 63 49.2
Rhsim02G0160900 Rhododendron simsii HOM05D000002 ORTHO05D000001 8.1e-10 67.0 74 41.9
CSS0042232 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-09 66.6 62 50.0
Hma1.2p1_0067F.1_g037120 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.1e-09 66.6 65 49.2
Hma1.2p1_0200F.1_g086090 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.1e-09 66.6 68 50.0
Atru.chr3.2937 Acer truncatum HOM05D000002 ORTHO05D000001 1.8e-09 65.9 68 48.5
Atru.chr6.358 Acer truncatum HOM05D000002 ORTHO05D000001 1.8e-09 65.9 68 50.0
Atru.chr8.532 Acer truncatum HOM05D000002 ORTHO05D000001 1.8e-09 65.9 68 48.5
COL.COLO4_24669 Corchorus olitorius HOM05D014020 ORTHO05D000001 1.8e-09 65.9 66 42.4
TPR.G8161 Trifolium pratense HOM05D000002 ORTHO05D000001 1.8e-09 65.9 67 44.8
Atru.chr13.1786 Acer truncatum HOM05D000002 ORTHO05D000001 2.4e-09 65.5 68 47.1
Atru.chr2.2580 Acer truncatum HOM05D000002 ORTHO05D000001 2.4e-09 65.5 56 51.8
Manes.05G146201 Manihot esculenta HOM05D016702 ORTHO05D000001 2.4e-09 65.5 68 52.9
Migut.K01257 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.1e-09 65.1 63 46.0
Nn1g00402 Nelumbo nucifera HOM05D000002 ORTHO05D000001 5.3e-09 64.3 67 47.8
TWI73G1050 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 5.3e-09 64.3 63 47.6
Nn2g11549 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.9e-09 63.9 67 47.8
TWI63G1325 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 6.9e-09 63.9 71 43.7
COL.COLO4_38540 Corchorus olitorius HOM05D026776 ORTHO05D000001 9.0e-09 63.5 69 43.5
HanXRQChr14g0461191 Helianthus annuus HOM05D000002 ORTHO05D000001 9.0e-09 63.5 63 46.0
Psat5g305960 Pisum sativum HOM05D000002 ORTHO05D000001 9.0e-09 63.5 66 47.0
TWI77G0605 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 9.0e-09 63.5 64 46.9
CSS0011046 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-08 62.8 59 52.5
CSS0025864 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-08 62.8 63 44.4
COL.COLO4_22605 Corchorus olitorius HOM05D014020 ORTHO05D000001 1.5e-08 62.8 67 44.8
Nitab4.5_0007134g0020 Nicotiana tabacum HOM05D000002 ORTHO05D000001 1.5e-08 62.8 43 76.7
Duzib235G0480 Durio zibethinus HOM05D000002 ORTHO05D000001 2.0e-08 62.4 65 47.7
Gorai.001G219800 Gossypium raimondii HOM05D000002 ORTHO05D000001 2.0e-08 62.4 62 43.5
TWI75G0432 Tripterygium wilfordii HOM05D017849 ORTHO05D000001 2.0e-08 62.4 66 40.9
Sp4g06215 Schrenkiella parvula HOM05D000002 ORTHO05D000001 2.6e-08 62.0 62 48.4
Hma1.2p1_0682F.1_g202600 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.4e-08 61.6 69 42.0
THA.LOC104807052 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 3.4e-08 61.6 61 52.5
THA.LOC109116241 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 3.4e-08 61.6 61 52.5
Actinidia05383 Actinidia chinensis HOM05D000002 ORTHO05D000001 4.4e-08 61.2 70 42.9
SHI03004 Sapria himalayana HOM05D000624 ORTHO05D000495 4.4e-08 61.2 61 50.8
Atru.chr2.2332 Acer truncatum HOM05D000002 ORTHO05D000001 5.8e-08 60.8 64 42.2
ECA233G6231 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.8e-08 60.8 75 42.7
ECA234G0762 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.8e-08 60.8 75 42.7
Hma1.2p1_0462F.1_g158010 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.8e-08 60.8 56 50.0
Sopen05g028670 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-08 60.8 72 48.6
COL.COLO4_18983 Corchorus olitorius HOM05D014020 ORTHO05D000001 7.6e-08 60.5 68 39.7
THA.LOC104824784 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 7.6e-08 60.5 61 49.2
COL.COLO4_11301 Corchorus olitorius HOM05D014020 ORTHO05D000001 9.9e-08 60.1 67 41.8
Peaxi162Scf00063g00071 Petunia axillaris HOM05D000002 ORTHO05D000001 9.9e-08 60.1 67 43.3
Atru.chr13.1158 Acer truncatum HOM05D000002 ORTHO05D000001 1.3e-07 59.7 56 50.0
Manes.02G212860 Manihot esculenta HOM05D016702 ORTHO05D000001 1.3e-07 59.7 80 43.8
Atru.chr1.2464 Acer truncatum HOM05D000002 ORTHO05D000001 1.7e-07 59.3 64 45.3
Ciclev10013678m.g Citrus clementina HOM05D000002 ORTHO05D000001 1.7e-07 59.3 63 36.5
COL.COLO4_08663 Corchorus olitorius HOM05D014020 ORTHO05D000001 1.7e-07 59.3 66 39.4
HanXRQChr15g0476521 Helianthus annuus HOM05D000002 ORTHO05D000001 1.7e-07 59.3 68 41.2
Psat0s454g0080 Pisum sativum HOM05D000002 ORTHO05D000001 1.7e-07 59.3 64 40.6
COL.COLO4_16378 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.2e-07 58.9 61 42.6
Migut.D01554 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.2e-07 58.9 62 43.5
HanXRQChr17g0541481 Helianthus annuus HOM05D000002 ORTHO05D000001 2.2e-07 58.9 60 41.7
Nitab4.5_0000027g0330 Nicotiana tabacum HOM05D000002 ORTHO05D000001 2.2e-07 58.9 65 43.1
Psat1g116320 Pisum sativum HOM05D000002 ORTHO05D000001 2.2e-07 58.9 80 38.8
Psat4g122360 Pisum sativum HOM05D000002 ORTHO05D000001 2.2e-07 58.9 80 38.8
THA.LOC104801935 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.2e-07 58.9 61 49.2
COL.COLO4_12289 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.9e-07 58.5 67 43.3
SHI29540 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-07 58.5 62 41.9
THA.LOC109115986 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 2.9e-07 58.5 61 50.8
TPR.G7779 Trifolium pratense HOM05D000002 ORTHO05D000001 2.9e-07 58.5 56 50.0
ECA233G4466 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.8e-07 58.2 68 39.7
Thhalv10011941m.g Eutrema salsugineum HOM05D000002 ORTHO05D000001 3.8e-07 58.2 60 46.7
TPR.G5721 Trifolium pratense HOM05D000002 ORTHO05D000001 3.8e-07 58.2 60 46.7
ECA240G2866 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.9e-07 57.8 67 41.8
Hma1.2p1_0763F.1_g214730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.9e-07 57.8 65 47.7
PSO339G3901 Papaver somniferum HOM05D000002 ORTHO05D000001 4.9e-07 57.8 71 39.4
Migut.E01000 Erythranthe guttata HOM05D000002 ORTHO05D000001 6.4e-07 57.4 68 45.6
Psat1g154000 Pisum sativum HOM05D000002 ORTHO05D000001 6.4e-07 57.4 67 37.3
Psat7g227320 Pisum sativum HOM05D000002 ORTHO05D000001 6.4e-07 57.4 68 35.3
Prupe.4G230800 Prunus persica HOM05D000002 ORTHO05D000001 6.4e-07 57.4 60 46.7
THA.LOC104806172 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 6.4e-07 57.4 59 50.8
THA.LOC104815444 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 6.4e-07 57.4 59 50.8
Peaxi162Scf00168g01729 Petunia axillaris HOM05D000002 ORTHO05D000001 8.4e-07 57.0 67 41.8
HanXRQChr03g0078371 Helianthus annuus HOM05D000002 ORTHO05D000001 1.1e-06 56.6 60 41.7
Migut.G01154 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.4e-06 56.2 65 41.5
CANSAT21G1279 Cannabis sativa HOM05D000002 ORTHO05D000001 1.9e-06 55.8 67 35.8
COL.COLO4_35628 Corchorus olitorius HOM05D014020 ORTHO05D000001 1.9e-06 55.8 66 36.4
COL.COLO4_37640 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.9e-06 55.8 66 40.9
ECA233G3042 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-06 55.8 63 44.4
ECA240G1898 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-06 55.8 77 37.7
TWI59G0793 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.9e-06 55.8 67 35.8
CSS0016107 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-06 55.5 67 43.3
ECA248G2841 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-06 55.5 64 42.2
Migut.C00657 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.4e-06 55.5 61 47.5
Migut.E01660 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.4e-06 55.5 65 41.5
MD14G1189500 Malus domestica HOM05D000002 ORTHO05D000001 2.4e-06 55.5 62 43.5
Atru.chr3.2494 Acer truncatum HOM05D000002 ORTHO05D000001 3.2e-06 55.1 57 40.4
PSO384G1753 Papaver somniferum HOM05D000002 ORTHO05D000001 3.2e-06 55.1 71 38.0
PSO675G8029 Papaver somniferum HOM05D000002 ORTHO05D000001 3.2e-06 55.1 70 38.6
PSO782G0612 Papaver somniferum HOM05D000002 ORTHO05D000001 3.2e-06 55.1 66 39.4
PSO832G0092 Papaver somniferum HOM05D000002 ORTHO05D000001 3.2e-06 55.1 67 37.3
PSO832G3798 Papaver somniferum HOM05D000002 ORTHO05D000001 3.2e-06 55.1 69 40.6
THA.LOC109116472 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 3.2e-06 55.1 58 46.6
TAR650G0001 Trochodendron aralioides HOM05D000067 ORTHO05D000001 3.2e-06 55.1 65 41.5
Aqoxy5G02395 Aquilegia oxysepala HOM05D000002 ORTHO05D000001 4.2e-06 54.7 63 39.7
Ciclev10013758m.g Citrus clementina HOM05D000002 ORTHO05D000001 4.2e-06 54.7 67 43.3
Peaxi162Scf00006g00121 Petunia axillaris HOM05D000002 ORTHO05D000001 4.2e-06 54.7 67 38.8
THA.LOC109116120 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 4.2e-06 54.7 61 47.5
Atru.chr4.1289 Acer truncatum HOM05D000002 ORTHO05D000001 5.4e-06 54.3 71 45.1
ECA236G4365 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.4e-06 54.3 60 43.3
Migut.J01067 Erythranthe guttata HOM05D000002 ORTHO05D000001 5.4e-06 54.3 66 42.4
Lj2g0009180 Lotus japonicus HOM05D000002 ORTHO05D000001 5.4e-06 54.3 60 43.3
Manes.15G175912 Manihot esculenta HOM05D016702 ORTHO05D000001 5.4e-06 54.3 64 45.3
Psat7g220520 Pisum sativum HOM05D000002 ORTHO05D000001 5.4e-06 54.3 60 36.7
Sp7g09245 Schrenkiella parvula HOM05D000002 ORTHO05D000001 5.4e-06 54.3 62 41.9
HanXRQChr13g0407151 Helianthus annuus HOM05D000002 ORTHO05D000001 7.1e-06 53.9 64 40.6
Hma1.2p1_0576F.1_g181890 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.1e-06 53.9 60 40.0
Hma1.2p1_0611F.1_g188700 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.1e-06 53.9 43 55.8
Nn1g06783 Nelumbo nucifera HOM05D023713 ORTHO05D000001 7.1e-06 53.9 64 39.1
CSS0002979 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.3e-06 53.5 63 41.3
CANSAT54G2325 Cannabis sativa HOM05D000002 ORTHO05D000001 9.3e-06 53.5 71 32.4
PSO729G0199 Papaver somniferum HOM05D000002 ORTHO05D000001 9.3e-06 53.5 71 36.6
THA.LOC104818098 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 9.3e-06 53.5 58 44.8


User provided reference genes

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