Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007034g0020 Nicotiana tabacum HOM05D001903 ORTHO05D001847 8.7e-112 407.5 298 100.0
Nitab4.5_0000373g0030 Nicotiana tabacum HOM05D001903 ORTHO05D001847 1.2e-31 141.4 215 58.1
Nitab4.5_0007793g0020 Nicotiana tabacum HOM05D001903 ORTHO05D001847 1.7e-27 127.5 321 54.8
Solyc03g116670.3 Solanum lycopersicum HOM05D001903 ORTHO05D001847 3.7e-22 109.8 322 51.9
Sopen03g035580 Solanum pennellii HOM05D001903 ORTHO05D001847 6.4e-22 109.0 322 50.9
Peaxi162Scf00332g00731 Petunia axillaris HOM05D001903 ORTHO05D001847 2.4e-21 107.1 209 43.5
PGSC0003DMG400000618 Solanum tuberosum HOM05D001903 ORTHO05D001847 1.6e-20 104.4 324 50.3
Migut.D01072 Erythranthe guttata HOM05D001903 ORTHO05D001847 8.1e-17 92.0 184 40.2
Cc04_g04320 Coffea canephora HOM05D001903 ORTHO05D001847 1.5e-15 87.8 217 37.8
Nitab4.5_0011590g0020 Nicotiana tabacum HOM05D001903 ORTHO05D001847 9.8e-15 85.1 337 38.9
CAN.G407.90 Capsicum annuum HOM05D001903 ORTHO05D001847 3.7e-14 83.2 200 40.5
Oeu045156.1 Olea europaea HOM05D001903 ORTHO05D001847 4.9e-14 82.8 205 38.0
Gorai.013G234200 Gossypium raimondii HOM05D001903 ORTHO05D001847 1.4e-13 81.3 194 35.6
GSVIVG01017324001 Vitis vinifera HOM05D001903 ORTHO05D001847 1.4e-13 81.3 191 36.6
SalBow2G2175 Salvia bowleyana HOM05D001903 ORTHO05D001847 1.9e-13 80.9 168 41.1
Gohir.D13G205300 Gossypium hirsutum HOM05D001903 ORTHO05D001847 7.1e-13 79.0 197 36.5
Gohir.A13G199800 Gossypium hirsutum HOM05D001903 ORTHO05D001847 1.2e-12 78.2 194 35.1
Lj9C500G15 Lonicera japonica HOM05D000020 ORTHO05D000543 2.7e-12 77.0 161 37.9
CiPaw.02G156600 Carya illinoinensis HOM05D001903 ORTHO05D001847 3.5e-12 76.6 225 35.1
CiPaw.01G246800 Carya illinoinensis HOM05D001903 ORTHO05D001847 7.8e-12 75.5 218 33.5
Duzib187G1121 Durio zibethinus HOM05D001903 ORTHO05D001847 7.8e-12 75.5 191 38.2
Aa31LG4G420 Aethionema arabicum HOM05D001903 ORTHO05D001847 1.3e-11 74.7 167 37.7
MSTRG.22740 Avicennia marina HOM05D001903 ORTHO05D001847 1.7e-11 74.3 203 36.0
PGSC0003DMG400028535 Solanum tuberosum HOM05D001903 ORTHO05D001847 1.7e-11 74.3 70 67.1
Manes.06G057500 Manihot esculenta HOM05D001903 ORTHO05D001847 2.3e-11 73.9 208 36.1
Cc06_g08340 Coffea canephora HOM05D001903 ORTHO05D001847 3.9e-11 73.2 200 32.5
MSTRG.26417 Avicennia marina HOM05D001903 ORTHO05D001847 6.6e-11 72.4 189 34.4
vmacro16901 Vaccinium macrocarpon HOM05D001903 ORTHO05D001847 6.6e-11 72.4 171 39.8
Gohir.A06G055100 Gossypium hirsutum HOM05D001903 ORTHO05D001847 8.6e-11 72.0 179 35.8
Gohir.D05G016700 Gossypium hirsutum HOM05D001903 ORTHO05D001847 8.6e-11 72.0 171 38.6
Dinv38116 Davidia involucrata HOM05D001903 ORTHO05D001847 1.9e-10 70.9 207 33.8
Duzib150G0453 Durio zibethinus HOM05D001903 ORTHO05D001847 1.9e-10 70.9 185 35.1
Duzib168G0350 Durio zibethinus HOM05D001903 ORTHO05D001847 1.9e-10 70.9 199 36.7
Gohir.A05G015600 Gossypium hirsutum HOM05D001903 ORTHO05D001847 1.9e-10 70.9 171 38.0
Sopen06g025400 Solanum pennellii HOM05D001903 ORTHO05D001847 1.9e-10 70.9 70 62.9
MSTRG.11137 Avicennia marina HOM05D001903 ORTHO05D001847 2.5e-10 70.5 199 34.7
Manes.14G133300 Manihot esculenta HOM05D001903 ORTHO05D001847 2.5e-10 70.5 208 31.7
unitig_52.g17457 Utricularia gibba HOM05D001903 ORTHO05D001847 4.3e-10 69.7 175 38.9
Actinidia15989 Actinidia chinensis HOM05D001903 ORTHO05D001847 5.6e-10 69.3 56 66.1
Aqoxy7G03684 Aquilegia oxysepala HOM05D001903 ORTHO05D001847 5.6e-10 69.3 190 35.3
Peaxi162Scf00046g00818 Petunia axillaris HOM05D001903 ORTHO05D001847 5.6e-10 69.3 199 33.2
Actinidia26389 Actinidia chinensis HOM05D001903 ORTHO05D001847 7.3e-10 68.9 198 36.9
SalBow6G2738 Salvia bowleyana HOM05D001903 ORTHO05D001847 7.3e-10 68.9 178 36.5
SalBow6G3359 Salvia bowleyana HOM05D001903 ORTHO05D001847 7.3e-10 68.9 178 36.5
Hma1.2p1_1144F.1_g261220 Hydrangea macrophylla HOM05D001903 ORTHO05D001847 9.5e-10 68.6 213 33.3
Potri.018G130100 Populus trichocarpa HOM05D001903 ORTHO05D001847 9.5e-10 68.6 206 34.0
Gorai.009G016900 Gossypium raimondii HOM05D001903 ORTHO05D001847 1.2e-09 68.2 171 38.0
Nn8g39477 Nelumbo nucifera HOM05D001903 ORTHO05D001847 1.2e-09 68.2 216 34.7
Sabra06G0050700 Salix brachista HOM05D001903 ORTHO05D001847 1.2e-09 68.2 210 32.4
Actinidia08800 Actinidia chinensis HOM05D001903 ORTHO05D001847 1.6e-09 67.8 51 68.6
Nn2g12060 Nelumbo nucifera HOM05D001903 ORTHO05D001847 1.6e-09 67.8 219 33.8
Dinv30598 Davidia involucrata HOM05D001903 ORTHO05D001847 2.1e-09 67.4 216 33.8
vmacro16774 Vaccinium macrocarpon HOM05D001903 ORTHO05D001847 2.1e-09 67.4 70 61.4
Ciclev10009189m.g Citrus clementina HOM05D001903 ORTHO05D001847 2.8e-09 67.0 177 37.3
Solyc06g068130.3 Solanum lycopersicum HOM05D001903 ORTHO05D001847 2.8e-09 67.0 80 53.8
Haze_16546 Corylus avellana HOM05D001903 ORTHO05D001847 3.6e-09 66.6 220 31.4
Eucgr.F03869 Eucalyptus grandis HOM05D001903 ORTHO05D001847 3.6e-09 66.6 98 49.0
FAN02G2078 Fragaria x ananassa HOM05D001903 ORTHO05D001847 3.6e-09 66.6 216 30.6
Oeu042101.2 Olea europaea HOM05D001903 ORTHO05D001847 3.6e-09 66.6 199 37.2
QL05p029561 Quercus lobata HOM05D001903 ORTHO05D001847 3.6e-09 66.6 227 31.7
SGA_v2.0_scaffold5G02688 Striga asiatica HOM05D001903 ORTHO05D001847 3.6e-09 66.6 198 36.9
Thecc.09G128300 Theobroma cacao HOM05D001903 ORTHO05D001847 3.6e-09 66.6 196 34.7
MBI01_g36596_MAGBIO Magnolia biondii HOM05D001903 ORTHO05D001847 4.7e-09 66.2 41 78.0
MSTRG.22741 Avicennia marina HOM05D001903 ORTHO05D001847 6.2e-09 65.9 203 35.0
Migut.I00772 Erythranthe guttata HOM05D001903 ORTHO05D001847 6.2e-09 65.9 208 34.6
TAR626G1723 Trochodendron aralioides HOM05D001903 ORTHO05D001847 6.2e-09 65.9 219 34.2
Eucgr.L02715 Eucalyptus grandis HOM05D001903 ORTHO05D001847 8.1e-09 65.5 98 48.0
CsaV3_2G002950 Cucumis sativus L. HOM05D001903 ORTHO05D001847 1.1e-08 65.1 172 32.6
ClCG09G002900 Citrullus lanatus HOM05D001903 ORTHO05D001847 1.4e-08 64.7 48 66.7
Aqoxy7G02202 Aquilegia oxysepala HOM05D001903 ORTHO05D001847 1.8e-08 64.3 95 45.3
PGR102G1074 Punica granatum HOM05D001903 ORTHO05D001847 1.8e-08 64.3 197 34.0
Sc12g0008720 Simmondsia chinensis HOM05D001903 ORTHO05D001847 1.8e-08 64.3 157 36.3
QL02p088755 Quercus lobata HOM05D001903 ORTHO05D001847 2.3e-08 63.9 205 32.7
Sabra18G0110600 Salix brachista HOM05D001903 ORTHO05D001847 3.1e-08 63.5 210 31.9
Sed0022395 Sechium edule HOM05D001903 ORTHO05D001847 3.1e-08 63.5 190 35.3
Sc08g0006520 Simmondsia chinensis HOM05D001903 ORTHO05D001847 3.1e-08 63.5 165 40.0
CSS0008952 Camellia sinensis var. sinensis HOM05D001903 ORTHO05D001847 4.0e-08 63.2 77 48.1
MELO3C023418.2 Cucumis melo HOM05D001903 ORTHO05D001847 4.0e-08 63.2 110 42.7
Duzib235G1087 Durio zibethinus HOM05D001903 ORTHO05D001847 4.0e-08 63.2 54 57.4
Manes.04G113400 Manihot esculenta HOM05D001903 ORTHO05D001847 4.0e-08 63.2 96 46.9
SalBow2G3236 Salvia bowleyana HOM05D001903 ORTHO05D001847 4.0e-08 63.2 175 35.4
Sed0018319 Sechium edule HOM05D001903 ORTHO05D001847 4.0e-08 63.2 201 34.8
TAR626G0355 Trochodendron aralioides HOM05D001903 ORTHO05D001847 4.0e-08 63.2 218 33.5
SalBow1G6243 Salvia bowleyana HOM05D001903 ORTHO05D001847 5.2e-08 62.8 156 32.7
arahy.Tifrunner.gnm1.ann1.ZC4B2S Arachis hypogaea HOM05D001903 ORTHO05D001847 6.8e-08 62.4 163 36.2
COL.COLO4_35107 Corchorus olitorius HOM05D001903 ORTHO05D001847 6.8e-08 62.4 200 33.0
MD17G1210200 Malus domestica HOM05D001903 ORTHO05D001847 6.8e-08 62.4 57 59.6
SGA_v2.0_scaffold37G14772 Striga asiatica HOM05D001903 ORTHO05D001847 6.8e-08 62.4 205 35.1
Ah.09g226370 Amaranthus hybridus HOM05D001903 ORTHO05D001847 8.9e-08 62.0 47 63.8
Nitab4.5_0000028g0320 Nicotiana tabacum HOM05D001903 ORTHO05D001847 8.9e-08 62.0 55 56.4
Ca_21670_v3 Cicer arietinum L. HOM05D001903 ORTHO05D001847 1.2e-07 61.6 196 28.6
MELO3C010333.2 Cucumis melo HOM05D001903 ORTHO05D001847 1.2e-07 61.6 137 41.6
CsaV3_1G030300 Cucumis sativus L. HOM05D001903 ORTHO05D001847 1.2e-07 61.6 137 39.4
CSS0046247 Camellia sinensis var. sinensis HOM05D001903 ORTHO05D001847 1.5e-07 61.2 161 40.4
CANSAT11G1026 Cannabis sativa HOM05D001903 ORTHO05D001847 1.5e-07 61.2 47 57.4
Gohir.D06G054100 Gossypium hirsutum HOM05D001903 ORTHO05D001847 1.5e-07 61.2 194 34.0
Lj3g0010604 Lotus japonicus HOM05D001903 ORTHO05D001847 1.5e-07 61.2 96 44.8
Atru.chr7.1135 Acer truncatum HOM05D001903 ORTHO05D001847 2.0e-07 60.8 189 32.8
CsaV3_7G032430 Cucumis sativus L. HOM05D001903 ORTHO05D001847 2.0e-07 60.8 110 41.8
MBI04_g29347_MAGBIO Magnolia biondii HOM05D001903 ORTHO05D001847 2.0e-07 60.8 46 67.4
Manes.11G056100 Manihot esculenta HOM05D001903 ORTHO05D001847 2.0e-07 60.8 49 59.2
Potri.006G068200 Populus trichocarpa HOM05D001903 ORTHO05D001847 2.6e-07 60.5 78 50.0
TAR636G0973 Trochodendron aralioides HOM05D001903 ORTHO05D001847 2.6e-07 60.5 207 30.9
Gorai.010G063200 Gossypium raimondii HOM05D001903 ORTHO05D001847 3.4e-07 60.1 194 33.5
Lalb_Chr13g0301771 Lupinus albus HOM05D001903 ORTHO05D001847 3.4e-07 60.1 180 33.3
Rhsim12G0191600 Rhododendron simsii HOM05D001903 ORTHO05D001847 3.4e-07 60.1 37 75.7
TPR.G26499 Trifolium pratense HOM05D001903 ORTHO05D001847 3.4e-07 60.1 201 29.9
TWI32G1121 Tripterygium wilfordii HOM05D001903 ORTHO05D001847 3.4e-07 60.1 179 33.5
TAR383G0227 Trochodendron aralioides HOM05D001903 ORTHO05D001847 3.4e-07 60.1 217 32.7
Cfa010644 Carpinus fangiana HOM05D001903 ORTHO05D001847 4.4e-07 59.7 215 31.2
Actinidia07422 Actinidia chinensis HOM05D001903 ORTHO05D001847 5.8e-07 59.3 80 48.8
Aqoxy54s001 Aquilegia oxysepala HOM05D001903 ORTHO05D001847 5.8e-07 59.3 57 59.6
Ciclev10025712m.g Citrus clementina HOM05D001903 ORTHO05D001847 5.8e-07 59.3 37 75.7
GSVIVG01015550001 Vitis vinifera HOM05D001903 ORTHO05D001847 5.8e-07 59.3 194 35.1
Ah.01g020680 Amaranthus hybridus HOM05D001903 ORTHO05D001847 7.6e-07 58.9 41 65.9
ClCG11G003130 Citrullus lanatus HOM05D001903 ORTHO05D001847 7.6e-07 58.9 169 32.5
ECA240G4176 Erigeron canadensis HOM05D001903 ORTHO05D001847 7.6e-07 58.9 159 35.2
Glyma.13G365300 Glycine max HOM05D001903 ORTHO05D001847 9.9e-07 58.5 164 32.9
Prupe.3G085500 Prunus persica HOM05D001903 ORTHO05D001847 9.9e-07 58.5 95 37.9
Sc14g0000200 Simmondsia chinensis HOM05D001903 ORTHO05D001847 9.9e-07 58.5 43 69.8
EL10Ac2g04227 Beta vulgaris HOM05D001903 ORTHO05D001847 1.3e-06 58.2 42 66.7
A10p19730 Brassica napus HOM05D001903 ORTHO05D001847 1.3e-06 58.2 92 38.0
CARHR192630 Cardamine hirsuta HOM05D001903 ORTHO05D001847 1.3e-06 58.2 67 49.3
CDE07G0415 Ceratophyllum demersum HOM05D001903 ORTHO05D001847 1.3e-06 58.2 48 60.4
AUR62012392 Chenopodium quinoa HOM05D001903 ORTHO05D001847 1.3e-06 58.2 38 73.7
AUR62031512 Chenopodium quinoa HOM05D001903 ORTHO05D001847 1.3e-06 58.2 42 66.7
Psat5g302240 Pisum sativum HOM05D001903 ORTHO05D001847 1.3e-06 58.2 87 41.4
Ah.14g079690 Amaranthus hybridus HOM05D001903 ORTHO05D001847 1.7e-06 57.8 198 32.8
SEGI_13914 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 1.7e-06 57.8 38 68.4
arahy.Tifrunner.gnm1.ann1.1E0HE3 Arachis hypogaea HOM05D001903 ORTHO05D013215 2.2e-06 57.4 168 35.7
BolC3t13622H Brassica oleracea HOM05D001903 ORTHO05D001847 2.2e-06 57.4 42 59.5
Glyma.13G165800 Glycine max HOM05D001903 ORTHO05D001847 2.2e-06 57.4 158 36.7
Hma1.2p1_0931F.1_g238090 Hydrangea macrophylla HOM05D001903 ORTHO05D001847 2.2e-06 57.4 49 59.2
Lj5A71G74 Lonicera japonica HOM05D001903 ORTHO05D001847 2.2e-06 57.4 212 33.0
Medtr4g010250 Medicago truncatula HOM05D001903 ORTHO05D001847 2.2e-06 57.4 165 33.9
TWI63G1536 Tripterygium wilfordii HOM05D001903 ORTHO05D001847 2.2e-06 57.4 176 31.2
A02p06090 Brassica napus HOM05D001903 ORTHO05D001847 2.9e-06 57.0 42 57.1
BNapus_Darmor_BZH_scaffold_38p01750 Brassica napus HOM05D001903 ORTHO05D001847 2.9e-06 57.0 42 57.1
BraA02t05560Z Brassica rapa HOM05D001903 ORTHO05D001847 2.9e-06 57.0 42 57.1
CAN.G573.7 Capsicum annuum HOM05D001903 ORTHO05D001847 2.9e-06 57.0 55 52.7
DCAR_016260 Daucus carota HOM05D000020 ORTHO05D000543 2.9e-06 57.0 86 43.0
Gohir.A05G126300 Gossypium hirsutum HOM05D001903 ORTHO05D001847 2.9e-06 57.0 78 44.9
PGR142G2496 Punica granatum HOM05D001903 ORTHO05D001847 2.9e-06 57.0 176 33.5
Hund09255 Selenicereus undatus HOM05D001903 ORTHO05D001847 2.9e-06 57.0 94 47.9
VMungo1080G1457 Vigna mungo HOM05D001903 ORTHO05D001847 2.9e-06 57.0 73 47.9
Atru.chr1.2983 Acer truncatum HOM05D001903 ORTHO05D001847 3.8e-06 56.6 211 32.2
AUR62013344 Chenopodium quinoa HOM05D001903 ORTHO05D001847 3.8e-06 56.6 47 61.7
RcHm_v2.0_Chr2g0135711 Rosa chinensis HOM05D001903 ORTHO05D001847 3.8e-06 56.6 222 31.5
BraA10t44049Z Brassica rapa HOM05D001903 ORTHO05D001847 4.9e-06 56.2 92 39.1
CANSAT56G4355 Cannabis sativa HOM05D001903 ORTHO05D001847 4.9e-06 56.2 225 29.8
PSO017G0828 Papaver somniferum HOM05D001903 ORTHO05D001847 4.9e-06 56.2 50 60.0
Phvul.005G177800 Phaseolus vulgaris HOM05D001903 ORTHO05D001847 4.9e-06 56.2 80 48.8
Sp5g35670 Schrenkiella parvula HOM05D001903 ORTHO05D001847 4.9e-06 56.2 208 30.8
TAR625G1235 Trochodendron aralioides HOM05D001903 ORTHO05D001847 4.9e-06 56.2 39 69.2
MSTRG.13750 Avicennia marina HOM05D006310 ORTHO05D007768 6.4e-06 55.8 53 52.8
BcaC08g47574 Brassica carinata HOM05D001903 ORTHO05D001847 6.4e-06 55.8 206 28.2
C03p11500 Brassica napus HOM05D001903 ORTHO05D001847 6.4e-06 55.8 51 54.9
C06p54220 Brassica napus HOM05D001903 ORTHO05D001847 6.4e-06 55.8 206 28.2
BolC6t40435H Brassica oleracea HOM05D001903 ORTHO05D001847 6.4e-06 55.8 206 28.2
Eucgr.C04231 Eucalyptus grandis HOM05D001903 ORTHO05D001847 6.4e-06 55.8 77 53.2
SEGI_10096 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 6.4e-06 55.8 57 52.6
Thecc.06G022200 Theobroma cacao HOM05D001903 ORTHO05D001847 6.4e-06 55.8 65 56.9
TPR.G37230 Trifolium pratense HOM05D001903 ORTHO05D001847 6.4e-06 55.8 187 31.0
BcaB05g22864 Brassica carinata HOM05D001903 ORTHO05D001847 8.4e-06 55.5 56 50.0
BcaC03g13742 Brassica carinata HOM05D001903 ORTHO05D001847 8.4e-06 55.5 42 54.8
BolC2t07026H Brassica oleracea HOM05D001903 ORTHO05D001847 8.4e-06 55.5 42 54.8
BraA07t32042Z Brassica rapa HOM05D001903 ORTHO05D001847 8.4e-06 55.5 206 28.6
Cpa.g.sc46.11 Carica papaya HOM05D001903 ORTHO05D001847 8.4e-06 55.5 197 32.5
FvH4_6g29850 Fragaria vesca HOM05D001903 ORTHO05D001847 8.4e-06 55.5 218 27.5
FAN14G4643 Fragaria x ananassa HOM05D001903 ORTHO05D001847 8.4e-06 55.5 218 27.5
Glyma.15G007900 Glycine max HOM05D001903 ORTHO05D001847 8.4e-06 55.5 180 30.6
Lsat_1_v5_gn_7_107661 Lactuca sativa HOM05D001903 ORTHO05D001847 8.4e-06 55.5 56 46.4
Lj4g0003692 Lotus japonicus HOM05D001903 ORTHO05D001847 8.4e-06 55.5 202 31.2
Sp6g24210 Schrenkiella parvula HOM05D001903 ORTHO05D001847 8.4e-06 55.5 67 47.8
SEGI_10481 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 8.4e-06 55.5 57 50.9


User provided reference genes

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