Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007027g0020 Nicotiana tabacum HOM05D006946 ORTHO05D008634 3.0e-185 651.7 343 100.0
PGSC0003DMG400025996 Solanum tuberosum HOM05D006946 ORTHO05D008634 7.5e-152 540.8 350 81.1
Solyc01g090220.4 Solanum lycopersicum HOM05D006946 ORTHO05D008634 1.3e-151 540.0 347 82.1
Sopen01g036020 Solanum pennellii HOM05D006946 ORTHO05D008634 2.9e-151 538.9 351 81.8
Nitab4.5_0000920g0010 Nicotiana tabacum HOM05D006946 ORTHO05D008634 2.0e-144 516.2 357 78.7
CAN.G1473.5 Capsicum annuum HOM05D006946 ORTHO05D008634 2.5e-139 499.2 350 75.7
Peaxi162Scf00475g00422 Petunia axillaris HOM05D000253 ORTHO05D000149 1.8e-116 423.3 415 58.6
Actinidia32506 Actinidia chinensis HOM05D006946 ORTHO05D008634 8.2e-106 387.9 343 58.6
CSS0010598 Camellia sinensis var. sinensis HOM05D006946 ORTHO05D008634 9.0e-105 384.4 347 59.1
vmacro13499 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 1.4e-102 377.1 347 57.9
Hma1.2p1_0072F.1_g038310 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 3.2e-102 375.9 347 58.2
Rhsim07G0036200 Rhododendron simsii HOM05D006946 ORTHO05D008634 2.0e-99 366.7 347 56.5
MSTRG.20688 Avicennia marina HOM05D006946 ORTHO05D008634 6.3e-98 361.7 341 57.5
TAR629G0179 Trochodendron aralioides HOM05D006946 ORTHO05D008634 6.3e-98 361.7 354 56.5
Thecc.01G395400 Theobroma cacao HOM05D006946 ORTHO05D008634 8.2e-98 361.3 345 55.7
Cc02_g25140 Coffea canephora HOM05D006946 ORTHO05D008634 3.1e-97 359.4 346 59.0
Atru.chr5.122 Acer truncatum HOM05D006946 ORTHO05D008634 4.1e-97 359.0 348 55.5
Ciclev10020918m.g Citrus clementina HOM05D006946 ORTHO05D008634 4.1e-97 359.0 348 54.0
GSVIVG01018284001 Vitis vinifera HOM05D006946 ORTHO05D008634 1.2e-96 357.5 349 55.0
Glyma.03G110700 Glycine max HOM05D006946 ORTHO05D008634 4.5e-96 355.5 354 55.1
VMungo0331G1797 Vigna mungo HOM05D006946 ORTHO05D008634 7.7e-96 354.8 350 54.9
Phvul.010G049700 Phaseolus vulgaris HOM05D006946 ORTHO05D008634 3.8e-95 352.4 351 54.1
Migut.B01532 Erythranthe guttata HOM05D006946 ORTHO05D008634 1.1e-94 350.9 343 53.9
vmacro13524 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 9.4e-94 347.8 407 49.1
arahy.Tifrunner.gnm1.ann1.4A1F8H Arachis hypogaea HOM05D006946 ORTHO05D008634 7.9e-93 344.7 351 52.7
arahy.Tifrunner.gnm1.ann1.GB8G30 Arachis hypogaea HOM05D006946 ORTHO05D008634 7.9e-93 344.7 351 52.1
COL.COLO4_12403 Corchorus olitorius HOM05D006946 ORTHO05D008634 3.0e-92 342.8 345 54.2
Duzib133G0968 Durio zibethinus HOM05D006946 ORTHO05D008634 3.9e-92 342.4 349 52.7
QL04p030124 Quercus lobata HOM05D006946 ORTHO05D008634 6.7e-92 341.7 349 53.6
SalBow5G3575 Salvia bowleyana HOM05D006946 ORTHO05D008634 4.4e-91 339.0 359 52.6
ECA240G0199 Erigeron canadensis HOM05D006946 ORTHO05D008634 3.7e-90 335.9 332 57.2
Lj3g0014310 Lotus japonicus HOM05D006946 ORTHO05D008634 3.7e-90 335.9 329 53.5
Potri.002G138000 Populus trichocarpa HOM05D006946 ORTHO05D008634 3.7e-90 335.9 348 52.3
Haze_02851 Corylus avellana HOM05D006946 ORTHO05D008634 1.4e-89 334.0 408 46.8
Cfa011066 Carpinus fangiana HOM05D006946 ORTHO05D008634 1.2e-88 330.9 412 45.9
PSO717G0092 Papaver somniferum HOM05D006946 ORTHO05D008634 7.7e-88 328.2 350 52.3
PSO675G1257 Papaver somniferum HOM05D006946 ORTHO05D008634 2.9e-87 326.2 350 51.7
SGA_v2.0_scaffold340G49324 Striga asiatica HOM05D006946 ORTHO05D008634 2.9e-87 326.2 367 50.1
Ca_25802_v3 Cicer arietinum L. HOM05D006946 ORTHO05D008634 6.5e-87 325.1 353 50.7
THA.LOC104817188 Tarenaya hassleriana HOM05D006946 ORTHO05D008634 8.5e-87 324.7 347 51.9
PGR042G0965 Punica granatum HOM05D006946 ORTHO05D008634 1.1e-86 324.3 349 49.6
CANSAT25G1232 Cannabis sativa HOM05D006946 ORTHO05D008634 4.2e-86 322.4 349 50.7
FAN06G0853 Fragaria x ananassa HOM05D006946 ORTHO05D008634 5.5e-86 322.0 349 50.4
Aqoxy1G01627 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 9.4e-86 321.2 348 50.3
Lsat_1_v5_gn_3_126900 Lactuca sativa HOM05D006946 ORTHO05D008634 9.4e-86 321.2 350 53.4
Aqoxy5G04137 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 2.1e-85 320.1 349 50.1
Carub.0005s2704 Capsella rubella HOM05D006946 ORTHO05D008634 2.1e-85 320.1 279 59.5
FvH4_7g10220 Fragaria vesca HOM05D006946 ORTHO05D008634 2.1e-85 320.1 349 50.1
FAN06G0591 Fragaria x ananassa HOM05D006946 ORTHO05D008634 2.1e-85 320.1 349 50.4
HanXRQChr13g0423251 Helianthus annuus HOM05D006946 ORTHO05D008634 2.1e-85 320.1 324 54.6
Medtr8g006950 Medicago truncatula HOM05D006946 ORTHO05D008634 2.1e-85 320.1 352 50.3
CARHR170620 Cardamine hirsuta HOM05D006946 ORTHO05D008634 2.7e-85 319.7 274 58.4
TPR.G33124 Trifolium pratense HOM05D006946 ORTHO05D008634 6.1e-85 318.5 358 49.4
Sp5g02920 Schrenkiella parvula HOM05D006946 ORTHO05D008634 1.8e-84 317.0 288 57.3
Lalb_Chr07g0195411 Lupinus albus HOM05D006946 ORTHO05D008634 3.0e-84 316.2 353 49.6
AT3G60300 Arabidopsis thaliana HOM05D006946 ORTHO05D008634 1.5e-83 313.9 280 56.8
FAN03G2893 Fragaria x ananassa HOM05D006946 ORTHO05D008634 4.4e-83 312.4 349 49.3
FAN10G0617 Fragaria x ananassa HOM05D006946 ORTHO05D008634 5.7e-83 312.0 346 48.8
FAN10G1802 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.3e-82 310.8 346 48.6
Gorai.008G109100 Gossypium raimondii HOM05D006946 ORTHO05D008634 1.7e-82 310.5 344 50.0
RcHm_v2.0_Chr1g0347961 Rosa chinensis HOM05D006946 ORTHO05D008634 3.1e-81 306.2 281 55.2
Thhalv10006060m.g Eutrema salsugineum HOM05D006946 ORTHO05D008634 3.5e-80 302.8 280 54.3
Aa31LG10G14420 Aethionema arabicum HOM05D006946 ORTHO05D008634 5.9e-80 302.0 303 53.5
Psat4g224200 Pisum sativum HOM05D006946 ORTHO05D008634 1.1e-78 297.7 337 48.7
Gohir.D12G100200 Gossypium hirsutum HOM05D006946 ORTHO05D008634 1.9e-78 297.0 344 48.3
TWI14G0580 Tripterygium wilfordii HOM05D006946 ORTHO05D008634 2.1e-77 293.5 337 48.4
Eucgr.E01546 Eucalyptus grandis HOM05D006946 ORTHO05D008634 6.1e-77 292.0 359 47.6
AL5G42520 Arabidopsis lyrata HOM05D006946 ORTHO05D008634 5.2e-76 288.9 272 53.7
Nn1g00836 Nelumbo nucifera HOM05D006946 ORTHO05D008634 6.8e-76 288.5 347 49.6
C04p32350 Brassica napus HOM05D006946 ORTHO05D008634 8.8e-76 288.1 273 55.3
EL10Ac1g00757 Beta vulgaris HOM05D006946 ORTHO05D008634 2.2e-74 283.5 324 51.5
A04p01710 Brassica napus HOM05D006946 ORTHO05D008634 2.2e-74 283.5 270 54.8
Gohir.A12G097300 Gossypium hirsutum HOM05D006946 ORTHO05D008634 4.8e-74 282.3 247 56.7
Sc02g0003120 Simmondsia chinensis HOM05D006946 ORTHO05D008634 1.4e-73 280.8 358 45.5
Sabra02G0106500 Salix brachista HOM05D006946 ORTHO05D008634 3.1e-73 279.6 427 42.6
BolC4t24784H Brassica oleracea HOM05D006946 ORTHO05D008634 7.0e-73 278.5 291 52.2
unitig_750.g28410 Utricularia gibba HOM05D006946 ORTHO05D008634 3.5e-72 276.2 352 48.0
BraA04t15895Z Brassica rapa HOM05D006946 ORTHO05D008634 1.5e-70 270.8 288 51.4
HPP92_022132 Vanilla planifolia HOM05D006946 ORTHO05D008634 1.5e-70 270.8 355 44.5
HPP92_022105 Vanilla planifolia HOM05D006946 ORTHO05D008634 1.9e-70 270.4 356 44.4
ATR0057G021 Amborella trichopoda HOM05D006946 ORTHO05D008634 1.2e-69 267.7 334 47.6
Zm00001eb200010 Zea mays HOM05D006946 ORTHO05D008634 2.7e-69 266.5 350 44.6
Actinidia18349 Actinidia chinensis HOM05D006946 ORTHO05D008634 8.3e-66 255.0 248 55.6
AUR62023403 Chenopodium quinoa HOM05D006946 ORTHO05D008634 5.4e-65 252.3 325 47.4
Ah.05g177890 Amaranthus hybridus HOM05D006946 ORTHO05D008634 1.6e-64 250.8 362 44.5
CiPaw.14G020200 Carya illinoinensis HOM05D006946 ORTHO05D008634 9.5e-62 241.5 198 60.1
Dinv43613 Davidia involucrata HOM05D006946 ORTHO05D008634 6.8e-60 235.3 237 55.7
Manes.05G055200 Manihot esculenta HOM05D006946 ORTHO05D008634 7.8e-56 221.9 249 50.6
AUR62013748 Chenopodium quinoa HOM05D006946 ORTHO05D008634 1.7e-55 220.7 362 42.8
Lj9A556T13 Lonicera japonica HOM05D006946 ORTHO05D008634 3.9e-55 219.5 254 50.4
Mapoly0040s0025 Marchantia polymorpha HOM05D006946 ORTHO05D008634 1.5e-51 207.6 335 39.4
Hund27407 Selenicereus undatus HOM05D006946 ORTHO05D008634 4.4e-51 206.1 563 31.1
Hma1.2p1_0072F.1_g038320 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 2.4e-49 200.3 175 59.4
Medtr5g027110 Medicago truncatula HOM05D006946 ORTHO05D008634 6.6e-47 192.2 244 46.7
Prupe.2G132200 Prunus persica HOM05D006946 ORTHO05D008634 3.4e-43 179.9 260 42.7
AagrBONN_evm.TU.Sc2ySwM_117.2461 Anthoceros agrestis HOM05D006946 ORTHO05D008634 3.7e-42 176.4 295 35.6
PSO017G5203 Papaver somniferum HOM05D006946 ORTHO05D008634 7.3e-38 162.2 228 43.9
Potri.014G048000 Populus trichocarpa HOM05D006946 ORTHO05D008634 2.3e-36 157.1 202 45.0
CBR_g38735 Chara braunii HOM05D000019 ORTHO05D000353 2.7e-32 143.7 364 28.3
SMO352G0084 Selaginella moellendorffii HOM05D006946 ORTHO05D008634 4.6e-32 142.9 158 44.9
Cpa.g.sc22.64 Carica papaya HOM05D006946 ORTHO05D008634 5.6e-30 136.0 102 61.8
MCO13G420 Micromonas commoda HOM05D006946 ORTHO05D008634 3.4e-19 100.1 169 33.7
Psat1g142640 Pisum sativum HOM05D006946 ORTHO05D008634 1.9e-17 94.4 100 49.0
Cpa.g.sc22.65 Carica papaya HOM05D006946 ORTHO05D008634 4.6e-16 89.7 226 31.0
Psat2g026240 Pisum sativum HOM05D006946 ORTHO05D008634 1.9e-14 84.3 82 52.4
Cre13.g581801 Chlamydomonas reinhardtii HOM05D006946 ORTHO05D008634 9.6e-14 82.0 233 28.3
Psat1g142600 Pisum sativum HOM05D006946 ORTHO05D008634 3.6e-13 80.1 82 51.2
MD02G1213400 Malus domestica HOM05D006946 ORTHO05D008634 2.0e-11 74.3 115 41.7
Hma1.2p1_0072F.1_g038330 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 7.6e-11 72.4 43 72.1
AUR62044571 Chenopodium quinoa HOM05D006946 ORTHO05D008634 4.9e-10 69.7 369 26.0
Psat5g300840 Pisum sativum HOM05D006946 ORTHO05D008634 1.4e-09 68.2 56 51.8
PRCOL_00003801 Prasinoderma coloniale HOM05D013257 ORTHO05D015313 5.4e-09 66.2 222 23.4
Os11g0565400 Oryza sativa ssp. japonica HOM05D006946 ORTHO05D008634 2.7e-08 63.9 43 67.4
QL04p089514 Quercus lobata HOM05D006946 ORTHO05D008634 2.3e-07 60.8 37 67.6
Psat6g138360 Pisum sativum HOM05D000346 ORTHO05D008634 5.1e-07 59.7 62 50.0
Psat0s4856g0040 Pisum sativum HOM05D006946 ORTHO05D008634 8.7e-07 58.9 51 54.9
Pp3c26_5370 Physcomitrium patens HOM05D003486 ORTHO05D004600 7.4e-06 55.8 113 28.3
HPP92_022101 Vanilla planifolia HOM05D006946 ORTHO05D008634 7.4e-06 55.8 46 60.9


User provided reference genes

Program Settings