Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007009g0030 Nicotiana tabacum HOM05D000274 ORTHO05D001466 1.0e-57 226.5 113 100.0
Nitab4.5_0004891g0010 Nicotiana tabacum HOM05D000274 ORTHO05D001466 4.2e-35 151.4 131 64.9
Nitab4.5_0003658g0080 Nicotiana tabacum HOM05D000274 ORTHO05D001466 9.5e-35 150.2 131 64.9
Dinv30808 Davidia involucrata HOM05D000274 ORTHO05D001466 1.5e-32 142.9 130 59.2
CAN.G1459.9 Capsicum annuum HOM05D000274 ORTHO05D001466 4.4e-32 141.4 131 60.3
Sopen01g043210 Solanum pennellii HOM05D000274 ORTHO05D001466 2.2e-31 139.0 131 59.5
CSS0003204 Camellia sinensis var. sinensis HOM05D000274 ORTHO05D001466 2.8e-31 138.7 130 61.5
CSS0049806 Camellia sinensis var. sinensis HOM05D000274 ORTHO05D001466 2.8e-31 138.7 130 61.5
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 3.7e-31 138.3 131 61.8
Solyc01g099690.3 Solanum lycopersicum HOM05D000274 ORTHO05D001466 1.1e-30 136.7 131 58.8
Dinv40339 Davidia involucrata HOM05D000274 ORTHO05D001466 1.8e-30 136.0 133 56.4
Hma1.2p1_1292F.1_g273720 Hydrangea macrophylla HOM05D000274 ORTHO05D001466 2.4e-30 135.6 130 58.5
Oeu043352.1 Olea europaea HOM05D000274 ORTHO05D001466 1.6e-29 132.9 131 59.5
EL10Ac4g09917 Beta vulgaris HOM05D000274 ORTHO05D001466 3.8e-28 128.3 128 54.7
DCAR_022148 Daucus carota HOM05D000274 ORTHO05D001466 3.8e-28 128.3 132 56.8
PGR031G3859 Punica granatum HOM05D000274 ORTHO05D001466 1.5e-27 126.3 128 57.0
Cfa006627 Carpinus fangiana HOM05D000274 ORTHO05D001466 7.3e-27 124.0 131 53.4
Haze_04141 Corylus avellana HOM05D000274 ORTHO05D001466 1.2e-26 123.2 129 53.5
TAR633G0202 Trochodendron aralioides HOM05D000274 ORTHO05D001466 1.2e-26 123.2 132 54.5
GSVIVG01031146001 Vitis vinifera HOM05D000274 ORTHO05D001466 1.6e-26 122.9 129 56.6
SalBow7G4273 Salvia bowleyana HOM05D000274 ORTHO05D001466 2.8e-26 122.1 133 54.9
Migut.B01019 Erythranthe guttata HOM05D000274 ORTHO05D001466 3.6e-26 121.7 128 53.1
AUR62000765 Chenopodium quinoa HOM05D000274 ORTHO05D001466 4.7e-26 121.3 131 55.0
AUR62005204 Chenopodium quinoa HOM05D000274 ORTHO05D001466 4.7e-26 121.3 131 55.0
Nn4g25836 Nelumbo nucifera HOM05D000274 ORTHO05D001466 6.1e-26 120.9 130 53.8
Cpa.g.sc48.94 Carica papaya HOM05D000274 ORTHO05D001466 8.0e-26 120.6 136 53.7
CANSAT54G2627 Cannabis sativa HOM05D000274 ORTHO05D001466 1.4e-25 119.8 133 51.9
Sc16g0008830 Simmondsia chinensis HOM05D000274 ORTHO05D001466 5.2e-25 117.9 132 53.8
Thecc.05G312800 Theobroma cacao HOM05D000274 ORTHO05D001466 5.2e-25 117.9 132 53.0
ClCG00G001990 Citrullus lanatus HOM05D000274 ORTHO05D001466 8.9e-25 117.1 127 52.0
ClCG02G015430 Citrullus lanatus HOM05D000274 ORTHO05D001466 8.9e-25 117.1 127 52.0
Cc02_g34110 Coffea canephora HOM05D000274 ORTHO05D001466 8.9e-25 117.1 131 54.2
FAN02G0716 Fragaria x ananassa HOM05D000274 ORTHO05D001466 1.2e-24 116.7 129 49.6
MD12G1213400 Malus domestica HOM05D000274 ORTHO05D001466 5.7e-24 114.4 131 49.6
Prupe.6G321000 Prunus persica HOM05D000274 ORTHO05D001466 5.7e-24 114.4 131 51.1
MSTRG.20419 Avicennia marina HOM05D000274 ORTHO05D001466 1.3e-23 113.2 132 51.5
MELO3C004223.2 Cucumis melo HOM05D000274 ORTHO05D001466 1.3e-23 113.2 124 53.2
CiPaw.08G162000 Carya illinoinensis HOM05D000274 ORTHO05D001466 1.7e-23 112.8 131 51.1
Atru.chr2.28 Acer truncatum HOM05D000274 ORTHO05D001466 2.2e-23 112.5 132 48.5
Lsat_1_v5_gn_9_124360 Lactuca sativa HOM05D000274 ORTHO05D001466 2.9e-23 112.1 136 49.3
RcHm_v2.0_Chr3g0455701 Rosa chinensis HOM05D000274 ORTHO05D001466 2.9e-23 112.1 129 48.1
FAN05G4255 Fragaria x ananassa HOM05D000274 ORTHO05D001466 4.9e-23 111.3 129 48.1
MD04G1200900 Malus domestica HOM05D000274 ORTHO05D001466 4.9e-23 111.3 131 48.9
Manes.08G117700 Manihot esculenta HOM05D000274 ORTHO05D001466 8.3e-23 110.5 133 49.6
Ah.04g161130 Amaranthus hybridus HOM05D000274 ORTHO05D001466 1.4e-22 109.8 95 60.0
Ca_05801_v3 Cicer arietinum L. HOM05D000274 ORTHO05D001466 1.4e-22 109.8 128 52.3
FvH4_6g06550 Fragaria vesca HOM05D000274 ORTHO05D001466 1.4e-22 109.8 129 47.3
FAN14G2027 Fragaria x ananassa HOM05D000274 ORTHO05D001466 1.4e-22 109.8 129 47.3
unitig_32.g11157 Utricularia gibba HOM05D000274 ORTHO05D001466 1.4e-22 109.8 131 51.9
Glyma.03G235800 Glycine max HOM05D000274 ORTHO05D001466 2.4e-22 109.0 128 49.2
Potri.013G017166 Populus trichocarpa HOM05D000274 ORTHO05D001466 2.4e-22 109.0 117 51.3
PSO210G4713 Papaver somniferum HOM05D000274 ORTHO05D001466 4.1e-22 108.2 137 49.6
PSO832G3347 Papaver somniferum HOM05D000274 ORTHO05D001466 4.1e-22 108.2 137 49.6
Lalb_Chr18g0045741 Lupinus albus HOM05D000274 ORTHO05D001466 5.4e-22 107.8 134 50.7
Eucgr.H04533 Eucalyptus grandis HOM05D000274 ORTHO05D001466 9.2e-22 107.1 141 48.2
CsaV3_2G006650 Cucumis sativus L. HOM05D000274 ORTHO05D001466 1.2e-21 106.7 130 48.5
Glyma.19G233600 Glycine max HOM05D000274 ORTHO05D001466 1.2e-21 106.7 129 51.2
HanXRQChr03g0071301 Helianthus annuus HOM05D000274 ORTHO05D001466 1.2e-21 106.7 122 51.6
Sabra13G0016000 Salix brachista HOM05D000274 ORTHO05D001466 2.0e-21 105.9 135 47.4
Phvul.006G089800 Phaseolus vulgaris HOM05D000274 ORTHO05D001466 2.7e-21 105.5 130 49.2
TWI56G0958 Tripterygium wilfordii HOM05D000274 ORTHO05D001466 3.5e-21 105.1 135 48.1
QL03p020996 Quercus lobata HOM05D000274 ORTHO05D001466 3.0e-20 102.1 133 48.9
QL03p021872 Quercus lobata HOM05D000274 ORTHO05D001466 3.0e-20 102.1 133 48.9
SpUn0237_0010 Schrenkiella parvula HOM05D000274 ORTHO05D001466 3.0e-20 102.1 140 45.0
SpUn0301_0010 Schrenkiella parvula HOM05D000274 ORTHO05D001466 3.0e-20 102.1 140 45.0
VMungo0540G1623 Vigna mungo HOM05D000274 ORTHO05D001466 3.0e-20 102.1 129 48.8
Lj1g0011369 Lotus japonicus HOM05D000274 ORTHO05D001466 3.9e-20 101.7 139 47.5
AL1G19570 Arabidopsis lyrata HOM05D000274 ORTHO05D001466 8.6e-20 100.5 139 45.3
AT1G09130 Arabidopsis thaliana HOM05D000274 ORTHO05D001466 8.6e-20 100.5 139 45.3
A08p34810 Brassica napus HOM05D000274 ORTHO05D001466 8.6e-20 100.5 130 48.5
BraA08t35392Z Brassica rapa HOM05D000274 ORTHO05D001466 8.6e-20 100.5 130 48.5
Gohir.A11G294700 Gossypium hirsutum HOM05D000274 ORTHO05D001466 8.6e-20 100.5 133 46.6
Gohir.D11G309400 Gossypium hirsutum HOM05D000274 ORTHO05D001466 8.6e-20 100.5 133 46.6
Gorai.007G341400 Gossypium raimondii HOM05D000274 ORTHO05D001466 8.6e-20 100.5 133 46.6
Carub.0001s0842 Capsella rubella HOM05D000274 ORTHO05D001466 2.5e-19 99.0 139 45.3
CARHR009000 Cardamine hirsuta HOM05D000274 ORTHO05D001466 2.5e-19 99.0 139 45.3
Thhalv10008180m.g Eutrema salsugineum HOM05D000274 ORTHO05D001466 2.5e-19 99.0 136 47.8
ATR0796G121 Amborella trichopoda HOM05D000274 ORTHO05D001466 3.3e-19 98.6 89 57.3
ECA240G0135 Erigeron canadensis HOM05D000274 ORTHO05D001466 3.3e-19 98.6 102 51.0
BcaC07g38478 Brassica carinata HOM05D000274 ORTHO05D001466 4.3e-19 98.2 132 47.0
C08p12450 Brassica napus HOM05D000274 ORTHO05D001466 4.3e-19 98.2 132 47.0
COL.COLO4_10517 Corchorus olitorius HOM05D000274 ORTHO05D001466 4.3e-19 98.2 132 44.7
BolC8t48885H Brassica oleracea HOM05D000274 ORTHO05D001466 5.6e-19 97.8 132 46.2
CDE02G0083 Ceratophyllum demersum HOM05D000274 ORTHO05D001466 5.6e-19 97.8 127 48.0
Aa31sc55G130 Aethionema arabicum HOM05D000274 ORTHO05D001466 1.2e-18 96.7 136 46.3
MBI18_g21820_MAGBIO Magnolia biondii HOM05D000274 ORTHO05D001466 6.2e-18 94.4 116 48.3
CDE08G0842 Ceratophyllum demersum HOM05D000274 ORTHO05D001466 1.8e-17 92.8 117 46.2
Duzib106G1487 Durio zibethinus HOM05D000274 ORTHO05D001466 1.8e-17 92.8 125 49.6
Sed0017660 Sechium edule HOM05D000274 ORTHO05D001466 2.3e-17 92.4 130 43.8
Psat0s27g0160 Pisum sativum HOM05D000274 ORTHO05D001466 4.0e-17 91.7 138 44.2
BcaC05g24762 Brassica carinata HOM05D000274 ORTHO05D001466 4.4e-16 88.2 135 45.2
MBI18_g13691_MAGBIO Magnolia biondii HOM05D000274 ORTHO05D001466 7.5e-16 87.4 123 45.5
THA.LOC104820780 Tarenaya hassleriana HOM05D000274 ORTHO05D001466 7.5e-16 87.4 138 42.8
Medtr7g112640 Medicago truncatula HOM05D000274 ORTHO05D001466 1.3e-15 86.7 131 45.0
Ciclev10003175m.g Citrus clementina HOM05D000274 ORTHO05D001466 2.9e-15 85.5 126 44.4
C05p07120 Brassica napus HOM05D000274 ORTHO05D001466 9.2e-14 80.5 132 43.2
TPR.G33238 Trifolium pratense HOM05D000274 ORTHO05D001466 4.6e-13 78.2 131 46.6
Hma1.2p1_1292F.1_g273730 Hydrangea macrophylla HOM05D000274 ORTHO05D001466 1.3e-12 76.6 90 52.2
Pp3c3_12000 Physcomitrium patens HOM05D000274 ORTHO05D001466 2.3e-12 75.9 88 50.0
AagrBONN_evm.TU.Sc2ySwM_117.1621 Anthoceros agrestis HOM05D000274 ORTHO05D001466 3.0e-12 75.5 128 42.2
Lj5A420G20 Lonicera japonica HOM05D000274 ORTHO05D001466 3.0e-12 75.5 124 41.9
Mapoly0091s0025 Marchantia polymorpha HOM05D000274 ORTHO05D001466 1.1e-11 73.6 92 45.7
Pp3c13_21640 Physcomitrium patens HOM05D000274 ORTHO05D001466 1.1e-11 73.6 88 46.6
Hund21710 Selenicereus undatus HOM05D000274 ORTHO05D001466 1.1e-11 73.6 136 39.0
Os03g0344900 Oryza sativa ssp. japonica HOM05D000274 ORTHO05D001466 1.5e-11 73.2 54 64.8
Zm00001eb016570 Zea mays HOM05D000274 ORTHO05D001466 1.5e-11 73.2 54 64.8
MBI07_g11176_MAGBIO Magnolia biondii HOM05D003828 ORTHO05D001786 6.2e-10 67.8 33 81.8
SMO203G0119 Selaginella moellendorffii HOM05D000274 ORTHO05D001466 2.6e-08 62.4 36 75.0
SMO357G0005 Selaginella moellendorffii HOM05D000274 ORTHO05D001466 4.4e-08 61.6 31 83.9
EL10Ac7g18141 Beta vulgaris HOM05D000274 ORTHO05D001466 1.7e-07 59.7 51 60.8
SGA_v2.0_scaffold36G14398 Striga asiatica HOM05D000274 ORTHO05D001466 2.2e-07 59.3 125 37.6
MCO01G248 Micromonas commoda HOM05D000274 ORTHO05D001466 4.9e-07 58.2 39 64.1
Aqoxy5G00726 Aquilegia oxysepala HOM05D000274 ORTHO05D001466 8.3e-07 57.4 134 32.1
MBI02_g14798_MAGBIO Magnolia biondii HOM05D000274 ORTHO05D001786 2.4e-06 55.8 43 60.5


User provided reference genes

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