Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007005g0060 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.5e-265 919.1 512 100.0
Nitab4.5_0003581g0050 Nicotiana tabacum HOM05D005877 ORTHO05D000482 3.1e-186 655.6 633 65.6
Nitab4.5_0008354g0060 Nicotiana tabacum HOM05D005877 ORTHO05D000482 5.2e-173 611.7 726 54.0
Nitab4.5_0004436g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 2.0e-172 609.8 653 60.8
Nitab4.5_0005900g0130 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.7e-155 552.4 810 49.6
Nitab4.5_0004308g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.7e-152 543.5 886 43.8
Nitab4.5_0005336g0040 Nicotiana tabacum HOM05D005877 ORTHO05D011670 3.3e-151 539.3 507 66.9
Nitab4.5_0019772g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.0e-144 517.7 556 61.3
Nitab4.5_0002282g0080 Nicotiana tabacum HOM05D005877 ORTHO05D000482 3.9e-144 515.8 513 62.4
Nitab4.5_0001684g0060 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.8e-141 506.9 634 54.9
Nitab4.5_0002459g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 4.0e-141 505.8 735 49.3
Nitab4.5_0003033g0070 Nicotiana tabacum HOM05D005877 ORTHO05D000482 7.1e-138 495.0 589 53.3
Nitab4.5_0008885g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.6e-134 483.8 584 54.6
Nitab4.5_0007035g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.1e-133 481.1 484 61.8
Nitab4.5_0002694g0040 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.0e-132 476.9 696 47.6
Nitab4.5_0008587g0040 Nicotiana tabacum HOM05D005877 ORTHO05D010356 8.4e-131 471.5 843 42.1
Nitab4.5_0005271g0050 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.5e-129 466.1 660 49.4
Nitab4.5_0007629g0050 Nicotiana tabacum HOM05D005877 ORTHO05D010356 9.6e-127 458.0 623 51.8
Nitab4.5_0008423g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 6.9e-125 451.8 653 49.8
Nitab4.5_0003674g0050 Nicotiana tabacum HOM05D005877 ORTHO05D010356 7.6e-124 448.4 596 52.5
Nitab4.5_0001947g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 9.0e-117 424.9 592 51.5
Nitab4.5_0002315g0040 Nicotiana tabacum HOM05D005877 ORTHO05D000482 4.3e-111 406.0 406 61.1
Nitab4.5_0004295g0030 Nicotiana tabacum HOM05D005877 ORTHO05D000482 5.7e-111 405.6 609 49.4
Nitab4.5_0006936g0060 Nicotiana tabacum HOM05D005877 ORTHO05D010356 6.9e-109 398.7 651 44.4
Nitab4.5_0004712g0020 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.2e-108 397.9 483 55.3
Nitab4.5_0003022g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 5.1e-104 382.5 493 51.1
Nitab4.5_0007251g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.9e-103 380.6 509 54.8
Nitab4.5_0014640g0020 Nicotiana tabacum HOM05D005877 ORTHO05D010356 4.1e-101 372.9 485 50.9
Nitab4.5_0005249g0080 Nicotiana tabacum HOM05D005877 ORTHO05D011670 1.2e-100 371.3 522 53.6
Nitab4.5_0022061g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.0e-99 368.2 549 49.4
Nitab4.5_0001329g0160 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.6e-97 360.9 501 50.9
Nitab4.5_0010313g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 2.1e-97 360.5 655 44.7
Nitab4.5_0006720g0050 Nicotiana tabacum HOM05D005877 ORTHO05D011670 1.1e-93 348.2 385 57.9
Nitab4.5_0001530g0050 Nicotiana tabacum HOM05D005877 ORTHO05D010356 9.1e-93 345.1 432 51.9
Nitab4.5_0000471g0160 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.3e-91 341.3 657 40.6
Nitab4.5_0000884g0110 Nicotiana tabacum HOM05D005877 ORTHO05D000482 6.5e-91 339.0 405 53.3
Nitab4.5_0007689g0030 Nicotiana tabacum HOM05D005877 ORTHO05D011670 6.5e-83 312.4 478 51.0
Nitab4.5_0005062g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.0e-80 305.1 619 39.9
Nitab4.5_0002804g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 2.0e-76 290.8 440 47.3
Nitab4.5_0005376g0050 Nicotiana tabacum HOM05D005877 ORTHO05D010356 9.4e-74 282.0 307 64.5
Nitab4.5_0006720g0040 Nicotiana tabacum HOM05D005877 ORTHO05D010356 9.4e-74 282.0 332 52.7
Nitab4.5_0002541g0060 Nicotiana tabacum HOM05D005877 ORTHO05D010356 4.7e-73 279.6 509 44.6
Nitab4.5_0009015g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.0e-72 276.9 252 71.0
Nitab4.5_0008927g0010 Nicotiana tabacum HOM05D005877 ORTHO05D011670 2.9e-67 260.4 234 67.1
Nitab4.5_0004656g0040 Nicotiana tabacum HOM05D005877 ORTHO05D010356 8.8e-64 248.8 357 48.7
Nitab4.5_0012573g0020 Nicotiana tabacum HOM05D005877 ORTHO05D010356 8.8e-64 248.8 365 47.4
Nitab4.5_0010812g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 9.8e-63 245.4 388 46.9
Nitab4.5_0005924g0030 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.3e-62 245.0 313 51.4
Nitab4.5_0005263g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 4.1e-61 240.0 297 51.5
Nitab4.5_0018926g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.6e-60 238.0 321 49.2
Nitab4.5_0010096g0040 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.5e-60 236.9 401 49.1
Nitab4.5_0000884g0100 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.2e-57 228.4 417 39.8
Nitab4.5_0004824g0060 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.8e-57 227.3 390 42.8
Nitab4.5_0002497g0020 Nicotiana tabacum HOM05D005877 ORTHO05D010356 5.2e-56 223.0 277 50.2
Nitab4.5_0007565g0040 Nicotiana tabacum HOM05D005877 ORTHO05D000482 2.0e-55 221.1 271 54.6
Nitab4.5_0001165g0060 Nicotiana tabacum HOM05D005877 ORTHO05D000482 4.9e-54 216.5 462 38.5
Nitab4.5_0025549g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 8.3e-54 215.7 318 48.1
Nitab4.5_0011007g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 5.9e-52 209.5 241 52.3
Nitab4.5_0002497g0050 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.3e-51 208.4 174 71.3
Nitab4.5_0006716g0010 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.9e-50 204.5 305 48.5
Nitab4.5_0007906g0060 Nicotiana tabacum HOM05D005877 ORTHO05D011670 5.6e-50 203.0 431 38.7
Nitab4.5_0004850g0030 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.6e-49 200.3 389 38.3
Nitab4.5_0014640g0030 Nicotiana tabacum HOM05D005877 ORTHO05D011670 8.9e-48 195.7 176 69.3
Nitab4.5_0012573g0030 Nicotiana tabacum HOM05D005877 ORTHO05D011670 4.9e-46 189.9 183 63.9
Nitab4.5_0018926g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 4.6e-44 183.3 161 68.9
Nitab4.5_0005924g0040 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.0e-43 182.2 154 72.7
Nitab4.5_0001031g0290 Nicotiana tabacum HOM05D005877 ORTHO05D010356 5.6e-42 176.4 160 62.5
Nitab4.5_0005376g0060 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.1e-37 162.2 128 74.2
Nitab4.5_0000566g0030 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.1e-32 145.6 137 66.4
Nitab4.5_0002650g0100 Nicotiana tabacum HOM05D005877 ORTHO05D010356 4.0e-32 143.7 206 51.9
Nitab4.5_0001878g0030 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.2e-30 137.9 306 37.3
Nitab4.5_0000688g0200 Nicotiana tabacum HOM05D005877 ORTHO05D011670 2.4e-29 134.4 127 68.5
Nitab4.5_0010812g0030 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.6e-28 131.7 114 68.4
Nitab4.5_0009099g0010 Nicotiana tabacum HOM05D005877 ORTHO05D000482 2.7e-28 131.0 173 50.9
Nitab4.5_0010096g0050 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.9e-26 124.8 246 35.4
Nitab4.5_0002503g0120 Nicotiana tabacum HOM05D005877 ORTHO05D010356 7.6e-23 112.8 61 88.5
Nitab4.5_0022061g0020 Nicotiana tabacum HOM05D005877 ORTHO05D011670 9.9e-23 112.5 91 72.5
Nitab4.5_0001029g0030 Nicotiana tabacum HOM05D005877 ORTHO05D011670 1.4e-21 108.6 124 55.6
Nitab4.5_0003240g0080 Nicotiana tabacum HOM05D005877 ORTHO05D284177 2.4e-21 107.8 199 39.7
Nitab4.5_0011643g0020 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.2e-21 107.5 62 82.3
Nitab4.5_0000677g0210 Nicotiana tabacum HOM05D005877 ORTHO05D010356 7.1e-21 106.3 60 86.7
Nitab4.5_0025549g0020 Nicotiana tabacum HOM05D005877 ORTHO05D011670 1.2e-20 105.5 71 78.9
Nitab4.5_0004656g0050 Nicotiana tabacum HOM05D005877 ORTHO05D011670 2.7e-20 104.4 74 77.0
Nitab4.5_0003240g0060 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.0e-19 102.4 95 65.3
Nitab4.5_0011007g0020 Nicotiana tabacum HOM05D005877 ORTHO05D011670 2.3e-19 101.3 174 45.4
Nitab4.5_0009028g0020 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.9e-19 100.5 60 81.7
Nitab4.5_0000566g0040 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.1e-18 99.0 59 83.1
Nitab4.5_0003373g0090 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.5e-18 97.8 99 61.6
Nitab4.5_0005412g0050 Nicotiana tabacum HOM05D005877 ORTHO05D285179 3.3e-18 97.4 130 48.5
Nitab4.5_0006716g0020 Nicotiana tabacum HOM05D005877 ORTHO05D011670 3.3e-18 97.4 78 78.2
Nitab4.5_0010096g0070 Nicotiana tabacum HOM05D005877 ORTHO05D011670 2.1e-17 94.7 75 70.7
Nitab4.5_0005062g0020 Nicotiana tabacum HOM05D005877 ORTHO05D011670 3.6e-17 94.0 74 73.0
Nitab4.5_0018108g0020 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.6e-17 94.0 99 60.6
Nitab4.5_0003768g0070 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.4e-16 91.3 51 84.3
Nitab4.5_0013004g0020 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.4e-16 91.3 51 86.3
Nitab4.5_0007495g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.1e-16 90.9 100 77.0
Nitab4.5_0023553g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.0e-15 88.2 47 89.4
Nitab4.5_0010712g0040 Nicotiana tabacum HOM05D005877 ORTHO05D010356 9.9e-15 85.9 93 53.8
Nitab4.5_0002804g0030 Nicotiana tabacum HOM05D005877 ORTHO05D011670 1.7e-14 85.1 55 78.2
Nitab4.5_0000860g0120 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.8e-14 84.0 71 67.6
Nitab4.5_0003240g0070 Nicotiana tabacum HOM05D005877 ORTHO05D010356 6.4e-14 83.2 60 73.3
Nitab4.5_0002806g0010 Nicotiana tabacum HOM05D005063 ORTHO05D005463 2.4e-13 81.3 299 28.4
Nitab4.5_0000231g0400 Nicotiana tabacum HOM05D005877 ORTHO05D010356 4.2e-13 80.5 47 83.0
Nitab4.5_0003079g0080 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.1e-12 78.2 223 29.1
Nitab4.5_0001425g0130 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.7e-12 77.8 88 51.1
Nitab4.5_0003233g0030 Nicotiana tabacum HOM05D005877 ORTHO05D011670 4.6e-12 77.0 63 71.4
Nitab4.5_0000584g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.5e-10 72.0 243 26.7
Nitab4.5_0008534g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.3e-10 70.5 225 26.7
Nitab4.5_0009099g0020 Nicotiana tabacum HOM05D005877 ORTHO05D011670 5.6e-10 70.1 56 69.6
Nitab4.5_0003111g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.0e-08 63.9 58 48.3
Nitab4.5_0003911g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.0e-08 63.9 58 48.3
Nitab4.5_0004850g0040 Nicotiana tabacum HOM05D005877 ORTHO05D011670 5.3e-08 63.5 118 43.2
Nitab4.5_0001031g0310 Nicotiana tabacum HOM05D005877 ORTHO05D282734 9.0e-08 62.8 50 68.0
Nitab4.5_0000477g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.5e-07 62.0 58 48.3
Nitab4.5_0003887g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.5e-07 62.0 58 48.3
Nitab4.5_0001410g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.0e-07 61.6 35 80.0
Nitab4.5_0006980g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.6e-07 61.2 58 46.6
Nitab4.5_0010313g0030 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.4e-07 60.8 31 90.3
PGSC0003DMG400014694 Solanum tuberosum HOM05D005063 ORTHO05D000482 3.4e-07 60.8 62 41.9
Nitab4.5_0000326g0300 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.5e-07 60.5 62 45.2
Nitab4.5_0002160g0110 Nicotiana tabacum HOM05D000713 ORTHO05D000482 5.8e-07 60.1 59 47.5
Nitab4.5_0000227g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 7.6e-07 59.7 58 43.1
Nitab4.5_0001927g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 7.6e-07 59.7 58 46.6
Nitab4.5_0002279g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 7.6e-07 59.7 58 44.8
Solyc06g008150.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 7.6e-07 59.7 62 41.9
Sopen06g002980 Solanum pennellii HOM05D005063 ORTHO05D000482 7.6e-07 59.7 62 41.9
Nitab4.5_0001029g0040 Nicotiana tabacum HOM05D005877 ORTHO05D010356 9.9e-07 59.3 31 87.1
Sopen01g038220 Solanum pennellii HOM05D005063 ORTHO05D000482 1.7e-06 58.5 59 49.2
Nitab4.5_0009218g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.2e-06 58.2 58 44.8
Nitab4.5_0002297g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.9e-06 57.8 58 43.1
Nitab4.5_0002951g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.8e-06 57.4 66 45.5
Nitab4.5_0012299g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.8e-06 57.4 58 44.8
PGSC0003DMG400000031 Solanum tuberosum HOM05D005063 ORTHO05D000482 3.8e-06 57.4 59 47.5
Nitab4.5_0000721g0150 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.9e-06 57.0 59 47.5
Solyc01g094420.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 4.9e-06 57.0 59 47.5
Nitab4.5_0001308g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 6.4e-06 56.6 99 35.4


User provided reference genes

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