Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 0.0e+00 1464.1 812 100.0
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 0.0e+00 1343.6 814 92.9
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 2.9e-287 991.9 833 72.6
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 2.5e-286 988.8 814 72.1
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 9.5e-270 933.7 823 70.0
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 5.7e-267 924.5 834 68.8
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 2.5e-262 909.1 823 68.7
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 1.7e-157 560.8 816 47.3
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 1.0e-138 498.4 918 42.2
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 5.0e-138 496.1 862 44.1
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 7.3e-137 492.3 826 42.9
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 9.5e-137 491.9 827 45.9
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 8.1e-136 488.8 821 45.2
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 1.2e-131 474.9 833 43.3
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 1.6e-131 474.6 830 42.8
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 3.1e-127 460.3 835 43.2
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 8.9e-127 458.8 933 40.1
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 3.4e-126 456.8 838 41.9
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 9.9e-126 455.3 941 40.6
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 1.9e-124 451.1 820 41.2
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 1.3e-122 444.9 798 41.7
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 1.3e-122 444.9 828 42.3
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 1.8e-119 434.5 854 41.2
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 1.5e-118 431.4 862 41.0
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 9.3e-116 422.2 818 40.2
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 9.3e-116 422.2 834 40.9
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 1.6e-115 421.4 894 39.5
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 1.3e-114 418.3 630 45.9
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 1.3e-114 418.3 628 46.5
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 6.6e-114 416.0 625 45.0
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 9.6e-113 412.1 653 44.1
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 6.2e-112 409.5 817 40.0
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 9.0e-111 405.6 824 40.2
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 1.2e-110 405.2 864 40.6
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 2.2e-109 401.0 651 43.5
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 3.2e-108 397.1 831 39.7
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 1.5e-105 388.3 676 42.5
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 2.5e-105 387.5 617 45.2
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 5.6e-105 386.3 850 39.1
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 3.7e-104 383.6 700 44.3
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 4.8e-104 383.3 658 44.1
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 6.2e-104 382.9 838 39.6
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 3.1e-103 380.6 687 43.4
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 5.3e-103 379.8 846 37.8
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 6.9e-103 379.4 827 38.5
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 3.4e-102 377.1 695 42.3
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 3.8e-101 373.6 681 41.0
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 2.4e-100 370.9 683 42.6
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 1.2e-99 368.6 895 37.8
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 4.6e-99 366.7 865 38.8
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 4.8e-96 356.7 837 36.8
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 1.5e-94 351.7 633 41.1
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 1.5e-94 351.7 702 40.9
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 6.5e-93 346.3 622 42.4
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 7.1e-92 342.8 787 38.2
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 1.6e-91 341.7 886 36.5
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 3.5e-91 340.5 828 37.6
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 4.6e-91 340.1 838 37.8
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 6.0e-91 339.7 819 38.9
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 2.3e-90 337.8 842 38.0
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 6.7e-90 336.3 672 40.5
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 1.1e-89 335.5 813 39.2
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 7.4e-89 332.8 649 40.7
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 6.3e-88 329.7 546 43.4
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 1.1e-87 328.9 826 37.3
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 4.1e-87 327.0 829 37.2
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 6.9e-87 326.2 681 39.5
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 2.0e-86 324.7 596 41.9
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 3.2e-84 317.4 826 36.2
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 8.7e-82 309.3 563 41.4
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 1.5e-81 308.5 289 62.3
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 3.3e-81 307.4 604 41.1
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 4.8e-80 303.5 553 41.4
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 4.8e-80 303.5 553 41.4
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 8.2e-80 302.8 819 37.9
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 2.6e-78 297.7 825 36.8
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 2.9e-77 294.3 767 35.9
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 6.5e-77 293.1 875 33.9
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 7.7e-70 269.6 680 35.7
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 9.4e-68 262.7 756 33.5
Lalb_Chr08g0245851 Lupinus albus HOM05D002134 ORTHO05D008658 6.1e-67 260.0 626 36.1
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 3.1e-63 247.7 600 37.2
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 7.0e-63 246.5 498 40.0
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 2.0e-62 245.0 551 36.5
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 5.9e-62 243.4 588 35.7
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 1.3e-61 242.3 697 34.1
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 3.2e-60 237.7 579 36.1
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 2.1e-59 235.0 433 38.6
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 4.7e-59 233.8 819 32.7
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 2.3e-58 231.5 610 37.0
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 1.3e-56 225.7 613 36.2
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 1.8e-55 221.9 802 31.5
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 2.0e-54 218.4 789 32.1
Sp5g30280 Schrenkiella parvula HOM05D002134 ORTHO05D008658 2.0e-54 218.4 604 34.3
CARHR068480 Cardamine hirsuta HOM05D002134 ORTHO05D008658 3.8e-53 214.2 766 32.0
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 3.6e-51 207.6 588 34.9
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 3.6e-51 207.6 588 34.9
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 8.0e-51 206.5 579 35.2
Ah.11g043170 Amaranthus hybridus HOM05D002134 ORTHO05D008658 2.8e-48 198.0 678 33.0
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 4.8e-48 197.2 788 30.3
Oeu036193.1 Olea europaea HOM05D002134 ORTHO05D008658 4.8e-48 197.2 449 39.6
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 1.8e-47 195.3 576 33.9
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 9.5e-44 183.0 595 31.6
Peaxi162Scf00162g00213 Petunia axillaris HOM05D000561 ORTHO05D000514 8.0e-43 179.9 146 69.2
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 8.9e-42 176.4 619 30.9
SHI17315 Sapria himalayana HOM05D002134 ORTHO05D008658 2.0e-41 175.3 306 41.2
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 1.4e-34 152.5 573 35.1
HPP92_018472 Vanilla planifolia HOM05D002134 ORTHO05D008658 3.7e-32 144.4 405 32.6
Mapoly0032s0034 Marchantia polymorpha HOM05D002134 ORTHO05D008658 3.6e-27 127.9 685 28.8
SMO144G0024 Selaginella moellendorffii HOM05D002134 ORTHO05D008658 1.4e-26 125.9 589 29.7
Cpa.g.sc64.73 Carica papaya HOM05D002134 ORTHO05D008658 9.8e-25 119.8 197 43.7
Pp3c7_550 Physcomitrium patens HOM05D002134 ORTHO05D008658 7.8e-22 110.2 693 25.8
Pp3c7_551 Physcomitrium patens HOM05D002134 ORTHO05D008658 7.8e-22 110.2 693 25.8
HPP92_018471 Vanilla planifolia HOM05D002134 ORTHO05D008658 6.2e-19 100.5 141 48.9
Actinidia29830 Actinidia chinensis HOM05D002134 ORTHO05D008658 2.0e-17 95.5 147 46.9
DCAR_011210 Daucus carota HOM05D001893 ORTHO05D008658 9.2e-07 60.1 192 35.4


User provided reference genes

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