Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006983g0030 Nicotiana tabacum HOM05D005325 ORTHO05D008457 1.2e-109 399.8 191 100.0
Nitab4.5_0000408g0140 Nicotiana tabacum HOM05D005325 ORTHO05D008457 1.9e-80 302.8 151 95.4
CAN.G700.24 Capsicum annuum HOM05D005325 ORTHO05D008457 1.7e-73 279.6 153 86.9
PGSC0003DMG400020866 Solanum tuberosum HOM05D005325 ORTHO05D008457 3.6e-71 271.9 153 83.0
Sopen09g014710 Solanum pennellii HOM05D005325 ORTHO05D008457 2.4e-70 269.2 149 83.2
Solyc09g031770.3 Solanum lycopersicum HOM05D005325 ORTHO05D008457 3.1e-70 268.9 149 83.2
Peaxi162Scf00116g00163 Petunia axillaris HOM05D005325 ORTHO05D008457 9.0e-70 267.3 154 83.8
CSS0007520 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 2.7e-66 255.8 152 77.0
CSS0011737 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 2.7e-66 255.8 152 77.0
Dinv28619 Davidia involucrata HOM05D005325 ORTHO05D008457 6.7e-65 251.1 152 74.3
Actinidia25148 Actinidia chinensis HOM05D005325 ORTHO05D008457 7.4e-64 247.7 153 73.2
Cc01_g13970 Coffea canephora HOM05D005325 ORTHO05D008457 6.2e-63 244.6 152 74.3
Oeu019913.1 Olea europaea HOM05D005325 ORTHO05D008457 2.0e-61 239.6 152 69.1
Cpa.g.sc112.50 Carica papaya HOM05D005325 ORTHO05D008457 2.6e-61 239.2 154 70.8
Lj1P141T46 Lonicera japonica HOM05D005325 ORTHO05D008457 7.6e-61 237.7 152 71.7
TAR636G1969 Trochodendron aralioides HOM05D005325 ORTHO05D008457 2.2e-60 236.1 152 70.4
DCAR_007389 Daucus carota HOM05D005325 ORTHO05D008457 2.9e-60 235.7 151 72.2
Cfa011661 Carpinus fangiana HOM05D005325 ORTHO05D008457 3.8e-60 235.3 152 73.0
COL.COLO4_19112 Corchorus olitorius HOM05D005325 ORTHO05D008457 6.4e-60 234.6 150 72.0
MELO3C025867.2 Cucumis melo HOM05D005325 ORTHO05D008457 1.9e-59 233.0 154 69.5
Prupe.6G060500 Prunus persica HOM05D005325 ORTHO05D008457 2.4e-59 232.6 152 71.7
Haze_24265 Corylus avellana HOM05D005325 ORTHO05D008457 4.2e-59 231.9 152 72.4
Rhsim13G0071900 Rhododendron simsii HOM05D005325 ORTHO05D008457 4.2e-59 231.9 151 68.2
Migut.D00728 Erythranthe guttata HOM05D005325 ORTHO05D008457 5.5e-59 231.5 148 68.2
MSTRG.18491 Avicennia marina HOM05D005325 ORTHO05D008457 9.3e-59 230.7 151 66.2
TPR.G24020 Trifolium pratense HOM05D005325 ORTHO05D008457 1.2e-58 230.3 155 70.3
vmacro02986 Vaccinium macrocarpon HOM05D005325 ORTHO05D008457 2.1e-58 229.6 151 69.5
Thecc.09G305000 Theobroma cacao HOM05D005325 ORTHO05D008457 3.5e-58 228.8 150 70.7
QL01p037417 Quercus lobata HOM05D005325 ORTHO05D008457 4.6e-58 228.4 149 71.8
Nn2g11401 Nelumbo nucifera HOM05D005325 ORTHO05D008457 6.0e-58 228.0 152 69.1
Sed0000838 Sechium edule HOM05D005325 ORTHO05D008457 7.9e-58 227.6 154 66.2
CiPaw.13G080600 Carya illinoinensis HOM05D005325 ORTHO05D008457 2.3e-57 226.1 152 70.4
LjContig00155g0003403 Lotus japonicus HOM05D005325 ORTHO05D008457 3.9e-57 225.3 152 69.1
SGA_v2.0_scaffold8G04497 Striga asiatica HOM05D005325 ORTHO05D008457 3.9e-57 225.3 150 66.7
GSVIVG01024786001 Vitis vinifera HOM05D005325 ORTHO05D008457 3.9e-57 225.3 152 67.1
Ciclev10029368m.g Citrus clementina HOM05D005325 ORTHO05D008457 6.7e-57 224.6 150 71.3
CsaV3_6G016370 Cucumis sativus L. HOM05D005325 ORTHO05D008457 6.7e-57 224.6 154 67.5
Ca_05587_v3 Cicer arietinum L. HOM05D005325 ORTHO05D008457 1.1e-56 223.8 154 68.2
Glyma.02G225500 Glycine max HOM05D005325 ORTHO05D008457 1.1e-56 223.8 152 67.1
Manes.02G121500 Manihot esculenta HOM05D005325 ORTHO05D008457 1.1e-56 223.8 157 67.5
Medtr5g069880 Medicago truncatula HOM05D005325 ORTHO05D008457 1.1e-56 223.8 154 66.9
Hund04885 Selenicereus undatus HOM05D005325 ORTHO05D008457 1.1e-56 223.8 152 68.4
MD11G1079900 Malus domestica HOM05D005325 ORTHO05D008457 3.3e-56 222.2 153 68.6
arahy.Tifrunner.gnm1.ann1.CQ7B2G Arachis hypogaea HOM05D005325 ORTHO05D008457 4.3e-56 221.9 154 68.2
Ah.08g220810 Amaranthus hybridus HOM05D005325 ORTHO05D008457 5.6e-56 221.5 152 67.1
arahy.Tifrunner.gnm1.ann1.VY3BKH Arachis hypogaea HOM05D005325 ORTHO05D008457 5.6e-56 221.5 155 69.0
Gohir.A05G089800 Gossypium hirsutum HOM05D005325 ORTHO05D008457 7.4e-56 221.1 149 69.8
FAN11G0298 Fragaria x ananassa HOM05D005325 ORTHO05D008457 1.6e-55 219.9 152 66.4
Glyma.14G192300 Glycine max HOM05D005325 ORTHO05D008457 1.6e-55 219.9 152 64.5
Psat2g059320 Pisum sativum HOM05D005325 ORTHO05D008457 1.6e-55 219.9 153 68.0
AUR62001679 Chenopodium quinoa HOM05D005325 ORTHO05D008457 2.1e-55 219.5 154 63.6
FvH4_3g38250 Fragaria vesca HOM05D005325 ORTHO05D008457 2.1e-55 219.5 152 66.4
FAN16G2295 Fragaria x ananassa HOM05D005325 ORTHO05D008457 2.1e-55 219.5 151 66.9
RcHm_v2.0_Chr5g0068731 Rosa chinensis HOM05D005325 ORTHO05D008457 2.8e-55 219.2 152 67.1
AUR62020101 Chenopodium quinoa HOM05D005325 ORTHO05D008457 4.8e-55 218.4 154 63.6
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 6.2e-55 218.0 150 66.7
PGR119G0476 Punica granatum HOM05D005325 ORTHO05D008457 6.2e-55 218.0 149 65.8
Duzib170G0996 Durio zibethinus HOM05D005325 ORTHO05D008457 8.1e-55 217.6 149 67.8
PSO384G1123 Papaver somniferum HOM05D005325 ORTHO05D008457 1.4e-54 216.9 152 66.4
Sc12g0000890 Simmondsia chinensis HOM05D005325 ORTHO05D008457 1.4e-54 216.9 154 67.5
TWI31G1198 Tripterygium wilfordii HOM05D005325 ORTHO05D008457 1.8e-54 216.5 150 67.3
Duzib168G2216 Durio zibethinus HOM05D005325 ORTHO05D008457 2.4e-54 216.1 149 67.8
PSO339G0931 Papaver somniferum HOM05D005325 ORTHO05D008457 2.4e-54 216.1 152 66.4
Aqoxy4G02653 Aquilegia oxysepala HOM05D005325 ORTHO05D008457 3.1e-54 215.7 151 66.9
FAN25G2817 Fragaria x ananassa HOM05D005325 ORTHO05D008457 3.1e-54 215.7 151 66.2
Gohir.D05G090700 Gossypium hirsutum HOM05D005325 ORTHO05D008457 5.3e-54 214.9 146 69.9
Gorai.009G093200 Gossypium raimondii HOM05D005325 ORTHO05D008457 5.3e-54 214.9 146 69.2
ECA248G3745 Erigeron canadensis HOM05D005325 ORTHO05D008457 1.5e-53 213.4 153 62.1
Lalb_Chr04g0252301 Lupinus albus HOM05D005325 ORTHO05D008457 1.5e-53 213.4 153 64.7
Carub.0004s1073 Capsella rubella HOM05D005325 ORTHO05D008457 2.6e-53 212.6 150 65.3
CARHR122960 Cardamine hirsuta HOM05D005325 ORTHO05D008457 2.6e-53 212.6 148 66.2
Lsat_1_v5_gn_5_172281 Lactuca sativa HOM05D005325 ORTHO05D008457 2.6e-53 212.6 151 65.6
VMungo0647G2564 Vigna mungo HOM05D005325 ORTHO05D008457 2.6e-53 212.6 150 65.3
Eucgr.J01937 Eucalyptus grandis HOM05D005325 ORTHO05D008457 3.4e-53 212.2 151 62.3
Sp4g12350 Schrenkiella parvula HOM05D005325 ORTHO05D008457 3.4e-53 212.2 146 66.4
TAR633G2421 Trochodendron aralioides HOM05D005325 ORTHO05D008457 7.6e-53 211.1 147 67.3
BcaC02g11048 Brassica carinata HOM05D005325 ORTHO05D008457 1.3e-52 210.3 149 65.1
Phvul.008G262400 Phaseolus vulgaris HOM05D005325 ORTHO05D008457 1.3e-52 210.3 150 63.3
BcaB02g10271 Brassica carinata HOM05D005325 ORTHO05D008457 2.2e-52 209.5 149 67.1
Potri.001G249400 Populus trichocarpa HOM05D005325 ORTHO05D008457 8.4e-52 207.6 152 63.8
Sabra16G0151500 Salix brachista HOM05D005325 ORTHO05D008457 1.1e-51 207.2 152 63.8
BolC4t23643H Brassica oleracea HOM05D005325 ORTHO05D008457 2.5e-51 206.1 147 65.3
AL4G24390 Arabidopsis lyrata HOM05D005325 ORTHO05D008457 3.2e-51 205.7 149 64.4
CANSAT54G0458 Cannabis sativa HOM05D005325 ORTHO05D008457 7.1e-51 204.5 153 62.7
Thhalv10017013m.g Eutrema salsugineum HOM05D005325 ORTHO05D008457 7.1e-51 204.5 144 65.3
Aa31LG5G6860 Aethionema arabicum HOM05D005325 ORTHO05D008457 6.0e-50 201.4 148 62.8
AT2G29640 Arabidopsis thaliana HOM05D005325 ORTHO05D008457 6.0e-50 201.4 135 68.1
C04p21170 Brassica napus HOM05D005325 ORTHO05D008457 1.8e-49 199.9 148 62.2
unitig_62.g23862 Utricularia gibba HOM05D005325 ORTHO05D008457 1.9e-48 196.4 149 57.0
unitig_64.g29774 Utricularia gibba HOM05D005325 ORTHO05D008457 1.9e-48 196.4 149 57.0
Os03g0265200 Oryza sativa ssp. japonica HOM05D005325 ORTHO05D008457 5.7e-48 194.9 151 57.0
Zm00001eb011730 Zea mays HOM05D005325 ORTHO05D008457 9.6e-48 194.1 151 55.0
BraA05t20490Z Brassica rapa HOM05D005325 ORTHO05D008457 4.8e-47 191.8 135 65.9
A05p15750 Brassica napus HOM05D005325 ORTHO05D008457 1.8e-46 189.9 135 65.2
EL10Ac7g16130 Beta vulgaris HOM05D005325 ORTHO05D008457 2.4e-46 189.5 148 59.5
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 9.0e-46 187.6 141 61.0
FAN21G2059 Fragaria x ananassa HOM05D005325 ORTHO05D008457 4.5e-45 185.3 124 66.9
BcaB06g28320 Brassica carinata HOM05D005325 ORTHO05D008457 7.6e-45 184.5 148 58.8
Thhalv10017876m.g Eutrema salsugineum HOM05D005325 ORTHO05D008457 2.9e-44 182.6 128 64.1
BolC4t27390H Brassica oleracea HOM05D005325 ORTHO05D008457 3.8e-44 182.2 145 59.3
A04p22570 Brassica napus HOM05D005325 ORTHO05D008457 2.5e-43 179.5 148 56.1
BraA04t17802Z Brassica rapa HOM05D005325 ORTHO05D008457 6.1e-42 174.9 134 61.2
BcaC02g08075 Brassica carinata HOM05D005325 ORTHO05D008457 3.3e-40 169.1 146 57.5
HPP92_015197 Vanilla planifolia HOM05D005325 ORTHO05D008457 4.3e-40 168.7 130 56.9
Pp3c13_16720 Physcomitrium patens HOM05D005325 ORTHO05D008457 1.1e-38 164.1 154 48.1
SHI11316 Sapria himalayana HOM05D005325 ORTHO05D008457 4.5e-37 158.7 142 51.4
C04p58710 Brassica napus HOM05D005325 ORTHO05D008457 1.3e-36 157.1 121 59.5
AagrBONN_evm.TU.Sc2ySwM_362.267 Anthoceros agrestis HOM05D005325 ORTHO05D008457 4.2e-35 152.1 157 46.5
Mapoly0026s0005 Marchantia polymorpha HOM05D005325 ORTHO05D008457 3.6e-34 149.1 154 44.2
AagrBONN_evm.TU.Sc2ySwM_362.272 Anthoceros agrestis HOM05D005325 ORTHO05D008457 2.8e-31 139.4 153 44.4
CDE10G0077 Ceratophyllum demersum HOM05D000561 ORTHO05D000514 1.2e-26 124.0 113 56.6
SMO351G0628 Selaginella moellendorffii HOM05D005325 ORTHO05D008457 3.9e-25 119.0 127 46.5
MBI14_g39232_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 5.0e-20 102.1 103 51.5
ClCG06G015800 Citrullus lanatus HOM05D005325 ORTHO05D008457 1.2e-16 90.9 150 38.0
Aa31LG5G6850 Aethionema arabicum HOM05D005325 ORTHO05D008457 2.0e-13 80.1 62 53.2
Haze_27525 Corylus avellana HOM05D005325 ORTHO05D008457 8.0e-10 68.2 146 28.1
Atru.chr3.4243 Acer truncatum HOM05D005325 ORTHO05D008457 1.4e-09 67.4 46 63.0
Cre03.g146707 Chlamydomonas reinhardtii HOM05D005325 ORTHO05D008457 6.8e-09 65.1 142 32.4
Lsat_1_v5_gn_9_104180 Lactuca sativa HOM05D005325 ORTHO05D024237 1.8e-06 57.0 41 58.5


User provided reference genes

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