Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006976g0040 Nicotiana tabacum HOM05D005754 ORTHO05D006843 1.3e-160 569.7 304 100.0
Nitab4.5_0006933g0010 Nicotiana tabacum HOM05D005754 ORTHO05D006843 3.7e-158 561.6 304 98.7
Sopen02g026230 Solanum pennellii HOM05D005754 ORTHO05D006843 4.8e-158 561.2 304 98.0
PGSC0003DMG400017743 Solanum tuberosum HOM05D005754 ORTHO05D006843 4.8e-158 561.2 304 98.0
Solyc02g081610.3 Solanum lycopersicum HOM05D005754 ORTHO05D006843 5.3e-157 557.8 304 97.4
PGSC0003DMG400024410 Solanum tuberosum HOM05D005754 ORTHO05D006843 7.6e-156 553.9 304 97.0
CAN.G809.72 Capsicum annuum HOM05D005754 ORTHO05D006843 1.3e-155 553.1 304 96.7
SalBow5G0150 Salvia bowleyana HOM05D005754 ORTHO05D006843 3.9e-128 461.8 304 79.3
Oeu063995.1 Olea europaea HOM05D005754 ORTHO05D006843 1.5e-127 459.9 304 80.3
vmacro03555 Vaccinium macrocarpon HOM05D005754 ORTHO05D006843 2.8e-126 455.7 304 78.0
Cc09_g05360 Coffea canephora HOM05D005754 ORTHO05D006843 9.1e-125 450.7 301 78.7
Duzib151G1210 Durio zibethinus HOM05D005754 ORTHO05D006843 9.1e-125 450.7 304 76.6
MSTRG.26599 Avicennia marina HOM05D005754 ORTHO05D006843 2.6e-124 449.1 304 76.6
Rhsim08G0028000 Rhododendron simsii HOM05D005754 ORTHO05D006843 3.5e-124 448.7 304 76.6
CSS0030019 Camellia sinensis var. sinensis HOM05D005754 ORTHO05D006843 5.0e-123 444.9 304 76.0
Rhsim02G0117500 Rhododendron simsii HOM05D005754 ORTHO05D006843 1.9e-122 443.0 304 75.7
Thecc.04G266000 Theobroma cacao HOM05D005754 ORTHO05D006843 2.1e-121 439.5 304 74.7
COL.COLO4_15977 Corchorus olitorius HOM05D005754 ORTHO05D006843 2.3e-120 436.0 304 74.3
CiPaw.09G178700 Carya illinoinensis HOM05D005754 ORTHO05D006843 4.0e-120 435.3 304 73.4
Ciclev10016094m.g Citrus clementina HOM05D005754 ORTHO05D006843 4.0e-120 435.3 297 75.8
CiPaw.09G178800 Carya illinoinensis HOM05D005754 ORTHO05D006843 5.2e-120 434.9 304 73.7
DCAR_002228 Daucus carota HOM05D005754 ORTHO05D006843 2.0e-119 433.0 304 75.0
Cpa.g.sc17.6 Carica papaya HOM05D005754 ORTHO05D006843 2.6e-119 432.6 304 74.3
QL03p068630 Quercus lobata HOM05D005754 ORTHO05D006843 7.5e-119 431.0 303 73.6
QL05p030092 Quercus lobata HOM05D005754 ORTHO05D006843 7.5e-119 431.0 303 73.6
Glyma.12G019600 Glycine max HOM05D005754 ORTHO05D006843 9.7e-119 430.6 304 73.0
Lalb_Chr17g0344101 Lupinus albus HOM05D005754 ORTHO05D006843 4.8e-118 428.3 301 72.4
VMungo1127G0046 Vigna mungo HOM05D005754 ORTHO05D006843 1.8e-117 426.4 304 72.0
HanXRQChr04g0115041 Helianthus annuus HOM05D005754 ORTHO05D006843 3.1e-117 425.6 281 78.3
Ca_04011_v3 Cicer arietinum L. HOM05D005754 ORTHO05D006843 4.1e-117 425.2 300 73.3
PSO801G0209 Papaver somniferum HOM05D005754 ORTHO05D006843 4.1e-117 425.2 295 74.6
TPR.G24478 Trifolium pratense HOM05D005754 ORTHO05D006843 5.3e-117 424.9 305 73.1
Cfa001129 Carpinus fangiana HOM05D005754 ORTHO05D006843 7.0e-117 424.5 295 75.3
Nn2g13637 Nelumbo nucifera HOM05D005754 ORTHO05D006843 1.2e-116 423.7 304 72.0
Nn2g13638 Nelumbo nucifera HOM05D005754 ORTHO05D006843 1.2e-116 423.7 304 72.0
Haze_05263 Corylus avellana HOM05D005754 ORTHO05D006843 2.0e-116 422.9 294 74.8
Medtr3g077990 Medicago truncatula HOM05D005754 ORTHO05D006843 1.0e-115 420.6 299 74.2
Migut.H00867 Erythranthe guttata HOM05D005754 ORTHO05D006843 2.2e-115 419.5 291 77.7
Potri.001G160600 Populus trichocarpa HOM05D005754 ORTHO05D006843 2.2e-115 419.5 297 72.4
Atru.chr10.361 Acer truncatum HOM05D005754 ORTHO05D006843 2.9e-115 419.1 290 75.2
Lj2P343T23 Lonicera japonica HOM05D005754 ORTHO05D006843 3.8e-115 418.7 281 78.3
MD05G1011700 Malus domestica HOM05D005754 ORTHO05D006843 5.0e-115 418.3 304 72.0
TAR636G0743 Trochodendron aralioides HOM05D005754 ORTHO05D006843 8.5e-115 417.5 304 71.7
TAR636G1551 Trochodendron aralioides HOM05D005754 ORTHO05D006843 8.5e-115 417.5 304 71.7
unitig_747.g21312 Utricularia gibba HOM05D005754 ORTHO05D006843 1.5e-114 416.8 304 70.7
Dinv31187 Davidia involucrata HOM05D005754 ORTHO05D006843 1.9e-114 416.4 304 74.0
PSO339G5576 Papaver somniferum HOM05D005754 ORTHO05D006843 2.5e-114 416.0 294 73.5
TPR.G21775 Trifolium pratense HOM05D005754 ORTHO05D006843 2.5e-114 416.0 305 71.1
Gorai.006G250700 Gossypium raimondii HOM05D005754 ORTHO05D006843 5.5e-114 414.8 304 70.7
Lsat_1_v5_gn_5_184141 Lactuca sativa HOM05D005754 ORTHO05D006843 5.5e-114 414.8 298 74.5
Gohir.D09G228000 Gossypium hirsutum HOM05D005754 ORTHO05D006843 7.2e-114 414.5 304 70.7
Potri.003G074300 Populus trichocarpa HOM05D005754 ORTHO05D006843 1.2e-113 413.7 297 72.1
FvH4_2g14913 Fragaria vesca HOM05D005754 ORTHO05D006843 2.7e-113 412.5 293 73.4
Sabra03G0045000 Salix brachista HOM05D005754 ORTHO05D006843 2.7e-113 412.5 297 72.1
TWI74G1242 Tripterygium wilfordii HOM05D005754 ORTHO05D006843 3.6e-113 412.1 304 71.1
Gohir.A09G227000 Gossypium hirsutum HOM05D005754 ORTHO05D006843 6.1e-113 411.4 304 70.4
Manes.16G050000 Manihot esculenta HOM05D005754 ORTHO05D006843 6.1e-113 411.4 304 70.4
TWI53G2110 Tripterygium wilfordii HOM05D005754 ORTHO05D006843 8.0e-113 411.0 296 72.6
arahy.Tifrunner.gnm1.ann1.RJAX1V Arachis hypogaea HOM05D005754 ORTHO05D006843 1.0e-112 410.6 305 70.5
Aqoxy2G00957 Aquilegia oxysepala HOM05D005754 ORTHO05D006843 2.3e-112 409.5 304 71.7
Prupe.8G016600 Prunus persica HOM05D005754 ORTHO05D006843 3.0e-112 409.1 304 71.1
MELO3C021702.2 Cucumis melo HOM05D005754 ORTHO05D006843 6.8e-112 407.9 304 70.4
RcHm_v2.0_Chr6g0277521 Rosa chinensis HOM05D005754 ORTHO05D006843 6.8e-112 407.9 296 72.6
THA.LOC104798565 Tarenaya hassleriana HOM05D005754 ORTHO05D006843 1.5e-111 406.8 305 71.8
CARHR129140 Cardamine hirsuta HOM05D005754 ORTHO05D006843 3.4e-111 405.6 305 70.8
arahy.Tifrunner.gnm1.ann1.9I9HCV Arachis hypogaea HOM05D005754 ORTHO05D006843 5.7e-111 404.8 305 69.8
ClCG01G009960 Citrullus lanatus HOM05D005754 ORTHO05D006843 5.7e-111 404.8 304 70.1
FAN24G3472 Fragaria x ananassa HOM05D005754 ORTHO05D006843 3.7e-110 402.1 293 72.4
FvH4_1g22930 Fragaria vesca HOM05D005754 ORTHO05D006843 1.4e-109 400.2 297 71.4
SGA_v2.0_scaffold184G40027 Striga asiatica HOM05D005754 ORTHO05D006843 2.4e-109 399.4 305 69.8
TAR633G0926 Trochodendron aralioides HOM05D005754 ORTHO05D006843 4.1e-109 398.7 304 69.4
Os02g0622200 Oryza sativa ssp. japonica HOM05D005754 ORTHO05D006843 7.0e-109 397.9 296 69.6
AT2G34980 Arabidopsis thaliana HOM05D005754 ORTHO05D006843 9.1e-109 397.5 305 69.2
Thhalv10016993m.g Eutrema salsugineum HOM05D005754 ORTHO05D006843 4.5e-108 395.2 305 68.9
Aa31LG9G16220 Aethionema arabicum HOM05D005754 ORTHO05D006843 5.9e-108 394.8 305 69.5
FAN28G1898 Fragaria x ananassa HOM05D005754 ORTHO05D006843 5.9e-108 394.8 304 69.4
Sc15g0000060 Simmondsia chinensis HOM05D005754 ORTHO05D006843 7.7e-108 394.4 304 67.4
Sed0006244 Sechium edule HOM05D005754 ORTHO05D006843 1.7e-107 393.3 304 67.8
RcHm_v2.0_Chr3g0496061 Rosa chinensis HOM05D005754 ORTHO05D006843 2.9e-107 392.5 304 68.4
MD12G1011000 Malus domestica HOM05D005754 ORTHO05D006843 3.8e-107 392.1 304 68.1
Prupe.7G012900 Prunus persica HOM05D005754 ORTHO05D006843 6.6e-107 391.3 304 67.4
Zm00001eb185080 Zea mays HOM05D005754 ORTHO05D006843 8.6e-107 391.0 301 68.4
Lj3g0027197 Lotus japonicus HOM05D005754 ORTHO05D006843 1.1e-106 390.6 298 69.1
C04p13810 Brassica napus HOM05D005754 ORTHO05D006843 6.1e-105 384.8 308 66.6
BraA05t20016Z Brassica rapa HOM05D005754 ORTHO05D006843 6.1e-105 384.8 315 64.8
BolC4t22971H Brassica oleracea HOM05D005754 ORTHO05D006843 1.0e-104 384.0 310 66.1
PGR142G3917 Punica granatum HOM05D005754 ORTHO05D006843 1.0e-104 384.0 300 66.7
BcaB02g09492 Brassica carinata HOM05D005754 ORTHO05D006843 1.4e-104 383.6 309 66.0
Ah.01g016960 Amaranthus hybridus HOM05D005754 ORTHO05D006843 6.8e-104 381.3 296 68.9
ATR0618G331 Amborella trichopoda HOM05D005754 ORTHO05D006843 3.4e-103 379.0 295 67.1
BcaB02g09491 Brassica carinata HOM05D005754 ORTHO05D006843 3.4e-103 379.0 306 66.3
A05p10720 Brassica napus HOM05D005754 ORTHO05D006843 9.8e-103 377.5 308 64.6
FAN19G0110 Fragaria x ananassa HOM05D005754 ORTHO05D006843 2.8e-102 375.9 281 71.5
Lsat_1_v5_gn_2_60361 Lactuca sativa HOM05D005754 ORTHO05D006843 3.7e-102 375.6 273 74.0
AL4G30990 Arabidopsis lyrata HOM05D005754 ORTHO05D006843 4.9e-102 375.2 305 67.2
BcaC02g07743 Brassica carinata HOM05D004145 ORTHO05D006843 3.2e-101 372.5 304 66.1
Carub.0004s1667 Capsella rubella HOM05D005754 ORTHO05D006843 5.4e-101 371.7 305 66.2
EL10Ac9g21106 Beta vulgaris HOM05D005754 ORTHO05D006843 2.0e-100 369.8 300 65.3
AUR62038334 Chenopodium quinoa HOM05D005754 ORTHO05D006843 1.0e-99 367.5 295 66.1
FAN26G0490 Fragaria x ananassa HOM05D005754 ORTHO05D006843 5.6e-98 361.7 281 69.8
AUR62023912 Chenopodium quinoa HOM05D005754 ORTHO05D006843 2.0e-95 353.2 281 66.9
SEGI_24883 Sequoiadendron giganteum HOM05D005754 ORTHO05D006843 1.7e-94 350.1 302 59.9
HPP92_025694 Vanilla planifolia HOM05D005754 ORTHO05D006843 6.4e-94 348.2 290 62.4
SHI51133 Sapria himalayana HOM05D005754 ORTHO05D006843 1.9e-93 346.7 305 60.0
Eucgr.G02638 Eucalyptus grandis HOM05D005754 ORTHO05D006843 2.3e-91 339.7 297 62.3
SHI47983 Sapria himalayana HOM05D005754 ORTHO05D006843 2.1e-81 306.6 285 59.6
Psat4g130160 Pisum sativum HOM05D005754 ORTHO05D006843 5.4e-77 292.0 237 67.5
Pp3c1_31960 Physcomitrium patens HOM05D005754 ORTHO05D006843 2.3e-75 286.6 306 51.6
Phvul.011G021750 Phaseolus vulgaris HOM05D005754 ORTHO05D006843 5.6e-74 282.0 195 73.3
QL06p000087 Quercus lobata HOM05D005754 ORTHO05D006843 1.8e-72 276.9 295 53.9
FAN27G3249 Fragaria x ananassa HOM05D005754 ORTHO05D006843 8.4e-70 268.1 195 73.3
AagrBONN_evm.TU.Sc2ySwM_368.2727 Anthoceros agrestis HOM05D005754 ORTHO05D006843 3.8e-62 242.7 297 48.1
SMO174G0201 Selaginella moellendorffii HOM05D005754 ORTHO05D006843 3.2e-61 239.6 295 50.2
AUR62040653 Chenopodium quinoa HOM05D002008 ORTHO05D006843 1.6e-60 237.3 195 67.2
Atru.chr10.357 Acer truncatum HOM05D005754 ORTHO05D006843 1.1e-58 231.1 163 71.8
Peaxi162Scf00048g00146 Petunia axillaris HOM05D005754 ORTHO05D006843 9.6e-58 228.0 211 64.5
GSVIVG01012143001 Vitis vinifera HOM05D005754 ORTHO05D006843 2.1e-57 226.9 159 74.2
Phvul.011G022000 Phaseolus vulgaris HOM05D005754 ORTHO05D006843 7.1e-53 211.8 139 75.5
SEGI_06024 Sequoiadendron giganteum HOM05D005754 ORTHO05D006843 2.1e-52 210.3 203 55.7
ECA238G2846 Erigeron canadensis HOM05D005754 ORTHO05D006843 7.9e-52 208.4 142 74.6
Mapoly0096s0067 Marchantia polymorpha HOM05D005754 ORTHO05D006843 2.3e-51 206.8 336 42.3
ClCG01G008540 Citrullus lanatus HOM05D005754 ORTHO05D006843 1.9e-50 203.8 300 45.0
Nitab4.5_0011913g0010 Nicotiana tabacum HOM05D005754 ORTHO05D006843 7.6e-47 191.8 99 99.0
Psat4g130000 Pisum sativum HOM05D005754 ORTHO05D006843 1.4e-45 187.6 245 50.6
Psat7g123440 Pisum sativum HOM05D005754 ORTHO05D006843 1.9e-34 150.6 186 50.0
CSS0033773 Camellia sinensis var. sinensis HOM05D005754 ORTHO05D006843 2.5e-34 150.2 289 38.8
TPR.G29739 Trifolium pratense HOM05D005754 ORTHO05D006843 4.3e-34 149.4 115 72.2
Sp2g07050 Schrenkiella parvula HOM05D005754 ORTHO05D006843 4.1e-32 142.9 111 66.7
CBR_g21245 Chara braunii HOM05D005754 ORTHO05D006843 9.0e-32 141.7 170 45.3
FAN15G0194 Fragaria x ananassa HOM05D005754 ORTHO05D006843 1.1e-26 124.8 97 70.1
CARHR278340 Cardamine hirsuta HOM05D005754 ORTHO05D006843 2.0e-18 97.4 86 59.3
Cre02.g109850 Chlamydomonas reinhardtii HOM05D005754 ORTHO05D006843 7.4e-18 95.5 299 29.8
CsaV3_1G018460 Cucumis sativus L. HOM05D001859 ORTHO05D001836 6.3e-17 92.4 54 75.9
BcaC02g11579 Brassica carinata HOM05D005754 ORTHO05D006843 5.3e-16 89.4 58 72.4
Medtr3g464840 Medicago truncatula HOM05D000092 ORTHO05D005910 2.9e-14 83.6 85 60.0
MCO15G034 Micromonas commoda HOM05D005754 ORTHO05D006843 3.8e-14 83.2 302 27.2
Hund00745 Selenicereus undatus HOM05D005754 ORTHO05D006843 8.5e-14 82.0 46 80.4
Cfa024382 Carpinus fangiana HOM05D005754 ORTHO05D006843 5.5e-13 79.3 185 36.2
Psat4g159400 Pisum sativum HOM05D003463 ORTHO05D004846 2.3e-11 73.9 150 36.0


User provided reference genes

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