Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006974g0020 Nicotiana tabacum HOM05D007884 ORTHO05D009968 2.8e-297 1024.6 559 100.0
Nitab4.5_0005550g0020 Nicotiana tabacum HOM05D007884 ORTHO05D009968 7.3e-221 770.8 558 81.7
PGSC0003DMG400013578 Solanum tuberosum HOM05D007884 ORTHO05D009968 3.3e-157 559.3 519 68.0
Sopen07g021970 Solanum pennellii HOM05D007884 ORTHO05D009968 1.7e-153 547.0 514 67.3
CAN.G63.2 Capsicum annuum HOM05D007884 ORTHO05D009968 1.4e-150 537.3 522 65.5
Cfa008093 Carpinus fangiana HOM05D007884 ORTHO05D009968 2.6e-77 293.9 508 35.4
Cc11_g04640 Coffea canephora HOM05D007884 ORTHO05D009968 7.6e-77 292.4 364 43.4
Dinv09394 Davidia involucrata HOM05D007884 ORTHO05D009968 1.0e-76 292.0 394 48.7
Haze_13924 Corylus avellana HOM05D007884 ORTHO05D009968 1.7e-76 291.2 390 45.4
Hma1.2p1_0004F.1_g003780 Hydrangea macrophylla HOM05D007884 ORTHO05D009968 1.2e-74 285.0 372 50.3
QL09p002129 Quercus lobata HOM05D007884 ORTHO05D009968 1.3e-73 281.6 503 34.4
CiPaw.03G016000 Carya illinoinensis HOM05D007884 ORTHO05D009968 8.2e-71 272.3 381 48.6
MSTRG.1590 Avicennia marina HOM05D007884 ORTHO05D009968 1.1e-70 271.9 364 47.8
Oeu023202.1 Olea europaea HOM05D007884 ORTHO05D009968 1.8e-70 271.2 395 48.6
Lj9P699T19 Lonicera japonica HOM05D007884 ORTHO05D009968 4.5e-69 266.5 397 47.6
Sc26g0002320 Simmondsia chinensis HOM05D007884 ORTHO05D009968 1.3e-68 265.0 424 43.4
DCAR_014075 Daucus carota HOM05D007884 ORTHO05D009968 2.1e-66 257.7 396 44.9
Thecc.08G176500 Theobroma cacao HOM05D007884 ORTHO05D009968 3.5e-66 256.9 409 42.1
SGA_v2.0_scaffold118G32599 Striga asiatica HOM05D007884 ORTHO05D009968 1.8e-65 254.6 365 46.8
Aqoxy7G02021 Aquilegia oxysepala HOM05D007884 ORTHO05D009968 7.4e-64 249.2 368 45.9
PGR031G2984 Punica granatum HOM05D007884 ORTHO05D009968 2.2e-63 247.7 359 46.2
Prupe.1G544500 Prunus persica HOM05D007884 ORTHO05D009968 8.2e-63 245.7 371 40.4
CANSAT25G3642 Cannabis sativa HOM05D007884 ORTHO05D009968 3.1e-62 243.8 405 38.8
Migut.C01368 Erythranthe guttata HOM05D007884 ORTHO05D009968 4.1e-62 243.4 341 46.3
Duzib177G0356 Durio zibethinus HOM05D007884 ORTHO05D009968 5.0e-60 236.5 381 43.8
TAR383G0946 Trochodendron aralioides HOM05D007884 ORTHO05D009968 5.0e-60 236.5 375 44.3
CSS0033652 Camellia sinensis var. sinensis HOM05D007884 ORTHO05D009968 1.1e-59 235.3 393 45.8
CSS0035845 Camellia sinensis var. sinensis HOM05D007884 ORTHO05D009968 1.1e-59 235.3 393 45.8
Potri.019G075900 Populus trichocarpa HOM05D007884 ORTHO05D009968 1.1e-59 235.3 499 31.9
ClCG10G005030 Citrullus lanatus HOM05D007884 ORTHO05D009968 3.2e-59 233.8 376 42.8
Peaxi162Scf00078g00351 Petunia axillaris HOM05D006237 ORTHO05D002967 2.1e-58 231.1 201 67.7
Sed0007017 Sechium edule HOM05D007884 ORTHO05D009968 3.6e-58 230.3 383 35.2
Actinidia29389 Actinidia chinensis HOM05D007884 ORTHO05D009968 4.6e-58 229.9 360 45.8
COL.COLO4_22419 Corchorus olitorius HOM05D007884 ORTHO05D009968 6.1e-58 229.6 345 44.6
Gohir.A07G085300 Gossypium hirsutum HOM05D007884 ORTHO05D009968 1.0e-57 228.8 370 37.0
EL10Ac1g01640 Beta vulgaris HOM05D007884 ORTHO05D009968 3.0e-57 227.3 379 41.4
Gorai.001G097200 Gossypium raimondii HOM05D007884 ORTHO05D009968 3.0e-57 227.3 370 37.8
AUR62022398 Chenopodium quinoa HOM05D007884 ORTHO05D009968 6.7e-57 226.1 395 41.3
CsaV3_4G033680 Cucumis sativus L. HOM05D007884 ORTHO05D009968 1.1e-56 225.3 374 44.1
Lj2g0010779 Lotus japonicus HOM05D007884 ORTHO05D009968 1.1e-56 225.3 372 43.5
Gohir.D07G090700 Gossypium hirsutum HOM05D007884 ORTHO05D009968 1.5e-56 224.9 370 37.8
Psat1g062080 Pisum sativum HOM05D007884 ORTHO05D009968 4.8e-55 219.9 369 42.5
Nn4g26038 Nelumbo nucifera HOM05D007884 ORTHO05D009968 1.2e-53 215.3 382 41.4
Lsat_1_v5_gn_4_133080 Lactuca sativa HOM05D007884 ORTHO05D009968 2.6e-53 214.2 389 39.3
PSO242G0004 Papaver somniferum HOM05D007884 ORTHO05D009968 2.6e-53 214.2 383 40.2
Sabra19G0086300 Salix brachista HOM05D007884 ORTHO05D009968 2.6e-53 214.2 386 32.9
MELO3C016698.2 Cucumis melo HOM05D007884 ORTHO05D009968 5.9e-53 213.0 329 45.9
Eucgr.F02657 Eucalyptus grandis HOM05D007884 ORTHO05D009968 7.7e-53 212.6 368 43.2
Nn3g17503 Nelumbo nucifera HOM05D007884 ORTHO05D009968 3.8e-52 210.3 479 37.6
Ah.05g168770 Amaranthus hybridus HOM05D007884 ORTHO05D009968 5.0e-52 209.9 449 37.2
CAN.G6574.1 Capsicum annuum HOM05D007884 ORTHO05D009968 1.9e-51 208.0 240 65.8
HanXRQChr17g0559001 Helianthus annuus HOM05D007884 ORTHO05D009968 4.2e-51 206.8 348 42.8
TWI75G0081 Tripterygium wilfordii HOM05D007884 ORTHO05D009968 2.7e-50 204.1 385 41.0
Medtr6g017035 Medicago truncatula HOM05D007884 ORTHO05D009968 4.7e-50 203.4 372 41.1
MD08G1213200 Malus domestica HOM05D007884 ORTHO05D009968 1.4e-49 201.8 371 39.9
Ciclev10019950m.g Citrus clementina HOM05D007884 ORTHO05D009968 2.6e-48 197.6 402 39.6
Ca_26346_v3 Cicer arietinum L. HOM05D007884 ORTHO05D009968 9.7e-48 195.7 273 38.1
Phvul.003G017800 Phaseolus vulgaris HOM05D007884 ORTHO05D009968 2.2e-47 194.5 372 40.3
TWI18G0215 Tripterygium wilfordii HOM05D007884 ORTHO05D009968 4.8e-47 193.4 347 34.9
VMungo1309G1853 Vigna mungo HOM05D007884 ORTHO05D009968 1.1e-46 192.2 372 40.3
Glyma.19G044700 Glycine max HOM05D007884 ORTHO05D009968 1.2e-45 188.7 372 40.6
Lalb_Chr02g0158331 Lupinus albus HOM05D007884 ORTHO05D009968 5.9e-45 186.4 365 40.8
Zm00001eb001440 Zea mays HOM05D007884 ORTHO05D009968 1.3e-44 185.3 366 31.7
HPP92_008446 Vanilla planifolia HOM05D007884 ORTHO05D009968 2.5e-43 181.0 369 39.8
Solyc07g042330.2 Solanum lycopersicum HOM05D007884 ORTHO05D009968 2.7e-42 177.6 209 52.2
Os03g0119700 Oryza sativa ssp. japonica HOM05D007884 ORTHO05D009968 6.7e-41 172.9 361 30.7
MBI04_g00944_MAGBIO Magnolia biondii HOM05D007884 ORTHO05D009968 3.3e-40 170.6 206 38.3
HPP92_008463 Vanilla planifolia HOM05D007884 ORTHO05D009968 6.3e-39 166.4 369 38.5
FvH4_5g33340 Fragaria vesca HOM05D007884 ORTHO05D009968 4.1e-38 163.7 501 25.3
FAN18G0070 Fragaria x ananassa HOM05D007884 ORTHO05D009968 4.1e-38 163.7 501 25.3
TPR.G21024 Trifolium pratense HOM05D007884 ORTHO05D009968 4.1e-38 163.7 372 37.1
Cpa.g.sc21.77 Carica papaya HOM05D007884 ORTHO05D009968 7.0e-38 162.9 276 40.6
Manes.18G118701 Manihot esculenta HOM05D007884 ORTHO05D009968 1.6e-37 161.8 284 41.2
AUR62043537 Chenopodium quinoa HOM05D007884 ORTHO05D009968 2.5e-35 154.5 287 43.6
RcHm_v2.0_Chr7g0232061 Rosa chinensis HOM05D007884 ORTHO05D009968 3.2e-35 154.1 364 28.6
FAN08G1312 Fragaria x ananassa HOM05D007884 ORTHO05D009968 3.0e-33 147.5 299 30.4
FAN04G3024 Fragaria x ananassa HOM05D007884 ORTHO05D009968 1.5e-32 145.2 501 24.8
Atru.chr13.2470 Acer truncatum HOM05D007884 ORTHO05D009968 7.5e-32 142.9 287 41.1
CDE04G2395 Ceratophyllum demersum HOM05D007884 ORTHO05D009968 6.3e-31 139.8 257 46.3
ECA232G0955 Erigeron canadensis HOM05D007884 ORTHO05D009968 7.7e-29 132.9 285 38.2
ATR0716G085 Amborella trichopoda HOM05D007884 ORTHO05D009968 1.0e-28 132.5 352 38.4
Nitab4.5_0005550g0040 Nicotiana tabacum HOM05D006237 ORTHO05D002967 3.4e-24 117.5 104 67.3
Nitab4.5_0006974g0010 Nicotiana tabacum HOM05D006237 ORTHO05D002967 9.8e-24 115.9 104 66.3
Solyc10g080160.2 Solanum lycopersicum HOM05D006237 ORTHO05D002967 2.7e-13 81.3 88 60.2
Sopen10g030770 Solanum pennellii HOM05D006237 ORTHO05D002967 2.7e-13 81.3 88 60.2
PGSC0003DMG400023687 Solanum tuberosum HOM05D006237 ORTHO05D002967 3.5e-13 80.9 89 59.6
SEGI_26452 Sequoiadendron giganteum HOM05D007884 ORTHO05D009968 3.3e-11 74.3 366 29.2
Hund17562 Selenicereus undatus HOM05D007884 ORTHO05D009968 2.0e-08 65.1 81 38.3
Haze_17998 Corylus avellana HOM05D000054 ORTHO05D002398 1.1e-06 59.3 127 34.6
Migut.F00315 Erythranthe guttata HOM05D006237 ORTHO05D002967 1.9e-06 58.5 102 47.1
Dinv35235 Davidia involucrata HOM05D006237 ORTHO05D002967 5.4e-06 57.0 105 44.8


User provided reference genes

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