Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 0.0e+00 1166.0 619 100.0
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 1.8e-284 982.2 623 85.1
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 2.3e-284 981.9 624 84.5
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 1.7e-279 965.7 622 85.0
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 4.0e-268 927.9 540 93.9
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 4.4e-243 844.7 623 76.4
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 1.1e-225 786.9 458 88.9
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 9.6e-198 694.1 647 63.7
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 3.8e-194 682.2 640 60.6
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 4.2e-193 678.7 610 63.9
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 7.1e-193 677.9 655 60.8
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 3.5e-192 675.6 615 60.8
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 1.9e-190 669.8 643 60.2
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 5.3e-188 661.8 637 61.2
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 2.0e-187 659.8 535 67.1
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 5.9e-187 658.3 543 67.0
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 1.4e-185 653.7 590 62.5
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 5.5e-185 651.7 668 60.5
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 7.9e-184 647.9 553 65.6
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 1.1e-182 644.0 624 58.2
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 2.5e-182 642.9 534 65.0
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 2.5e-182 642.9 576 63.4
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 2.5e-182 642.9 576 63.4
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 1.6e-181 640.2 641 58.2
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 2.8e-181 639.4 640 59.2
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 3.7e-181 639.0 643 60.8
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 1.4e-180 637.1 564 63.1
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 4.1e-180 635.6 633 59.7
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 5.3e-180 635.2 553 65.3
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 9.1e-180 634.4 534 64.6
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 1.0e-178 630.9 591 58.5
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 1.7e-178 630.2 713 54.7
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 6.5e-178 628.2 657 57.7
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 4.2e-177 625.5 622 58.2
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 7.2e-177 624.8 633 59.9
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 9.4e-177 624.4 529 62.0
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 2.1e-176 623.2 674 55.6
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 2.1e-176 623.2 600 59.2
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 6.1e-176 621.7 636 57.2
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 7.9e-176 621.3 636 56.3
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 2.2e-173 613.2 636 56.9
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 1.1e-172 610.9 649 56.9
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 1.8e-172 610.1 550 61.6
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 4.1e-172 609.0 564 61.3
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 5.3e-172 608.6 573 60.9
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 1.5e-171 607.1 554 61.0
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 4.5e-171 605.5 558 60.0
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 5.9e-171 605.1 595 58.8
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 1.3e-170 604.0 566 60.8
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 2.2e-170 603.2 642 56.2
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 2.2e-170 603.2 593 59.4
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 6.5e-170 601.7 640 56.6
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 8.5e-170 601.3 565 60.5
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 1.1e-169 600.9 577 60.1
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 1.4e-169 600.5 566 61.0
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 2.5e-169 599.7 593 59.2
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 3.2e-169 599.4 566 60.8
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 1.2e-168 597.4 552 60.3
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 1.8e-167 593.6 628 56.7
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 2.3e-167 593.2 634 57.6
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 2.3e-167 593.2 630 56.3
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 6.7e-167 591.7 551 61.0
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 2.6e-166 589.7 561 60.1
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 3.3e-166 589.3 626 56.5
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 7.4e-166 588.2 599 57.4
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 9.7e-166 587.8 561 59.4
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 2.2e-165 586.6 523 62.1
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 1.4e-164 583.9 625 55.8
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 2.4e-164 583.2 544 60.7
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 4.1e-164 582.4 547 60.9
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 4.1e-164 582.4 647 56.1
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 1.6e-163 580.5 585 58.3
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 3.5e-163 579.3 553 60.6
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 2.9e-162 576.2 618 56.1
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 3.2e-161 572.8 650 52.5
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 5.5e-161 572.0 540 59.6
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 9.4e-161 571.2 528 60.4
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 2.7e-152 543.1 546 58.8
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 2.7e-152 543.1 545 56.9
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 5.2e-151 538.9 567 58.0
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 8.6e-146 521.5 567 53.8
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 1.9e-145 520.4 579 53.7
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 5.2e-143 512.3 578 53.3
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 4.0e-135 486.1 456 59.9
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 4.1e-124 449.5 582 47.8
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 2.1e-115 420.6 533 47.1
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 1.1e-113 414.8 479 55.7
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 1.2e-102 378.3 409 58.2
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 1.3e-101 374.8 413 57.1
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 2.4e-100 370.5 462 52.4
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 3.2e-100 370.2 409 57.0
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 3.3e-97 360.1 433 52.4
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 1.3e-96 358.2 315 61.3
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 1.5e-94 351.3 465 49.5
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 1.9e-84 317.8 392 49.5
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 3.5e-83 313.5 455 44.8
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 7.4e-73 279.3 569 37.1
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 1.1e-60 238.8 248 56.9
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 7.2e-44 183.0 492 31.3
Glyma.08G131850 Glycine max HOM05D006816 ORTHO05D008666 1.6e-43 181.8 173 59.5
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 1.5e-33 148.7 146 58.9
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 5.7e-33 146.7 141 60.3
HPP92_023363 Vanilla planifolia HOM05D006816 ORTHO05D008666 7.0e-31 139.8 137 54.7
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 3.3e-28 131.0 122 62.3
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 4.7e-27 127.1 351 30.2
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 6.1e-27 126.7 98 69.4
CDE09G0157 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 5.2e-26 123.6 160 45.6
COL.COLO4_35805 Corchorus olitorius HOM05D006816 ORTHO05D008666 8.9e-26 122.9 97 58.8
Actinidia08129 Actinidia chinensis HOM05D006816 ORTHO05D008666 4.3e-20 104.0 81 67.9
Actinidia01355 Actinidia chinensis HOM05D006816 ORTHO05D008666 8.9e-18 96.3 61 73.8
FAN22G1065 Fragaria x ananassa HOM05D000247 ORTHO05D000288 4.6e-14 84.0 91 54.9
FvH4_4g35670 Fragaria vesca HOM05D006816 ORTHO05D008666 1.0e-13 82.8 84 56.0
CBR_g52391 Chara braunii HOM05D006816 ORTHO05D008666 6.2e-11 73.6 194 29.9


User provided reference genes

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