Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 1.8e-201 705.7 355 100.0
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 5.4e-185 651.0 355 93.8
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 5.4e-177 624.4 358 88.0
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 7.8e-176 620.5 358 88.0
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 3.3e-174 615.1 358 87.4
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 2.5e-158 562.4 356 81.7
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 2.9e-154 548.9 354 78.8
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 4.1e-153 545.0 361 77.6
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 3.6e-149 531.9 352 77.6
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 2.4e-148 529.3 367 74.4
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 4.0e-148 528.5 360 74.2
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 4.4e-147 525.0 305 85.2
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 9.9e-147 523.9 338 79.3
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 1.9e-145 519.6 360 74.4
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 2.4e-145 519.2 359 75.2
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 1.2e-144 516.9 281 90.7
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 1.2e-144 516.9 354 75.4
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 3.5e-144 515.4 344 76.7
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 2.3e-143 512.7 344 78.2
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 2.3e-143 512.7 349 74.5
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 3.0e-143 512.3 312 80.4
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 1.1e-142 510.4 317 82.3
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 4.3e-142 508.4 308 83.4
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 4.3e-142 508.4 352 73.6
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 2.1e-141 506.1 352 72.7
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 2.1e-141 506.1 302 83.8
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 3.6e-141 505.4 309 82.2
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 6.2e-141 504.6 321 78.5
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 1.4e-140 503.4 356 74.4
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 1.4e-140 503.4 352 73.6
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 1.8e-140 503.1 304 81.6
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 4.0e-140 501.9 361 72.3
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 5.3e-140 501.5 366 72.1
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 5.3e-140 501.5 354 73.4
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 9.0e-140 500.7 330 77.6
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 1.2e-139 500.4 364 71.2
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 1.2e-139 500.4 341 76.0
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 1.5e-139 500.0 347 71.8
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 1.5e-139 500.0 344 74.4
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 5.8e-139 498.0 361 72.0
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 1.3e-138 496.9 349 74.8
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 2.2e-138 496.1 335 75.5
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 3.8e-138 495.4 347 75.2
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 3.8e-138 495.4 332 75.6
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 8.4e-138 494.2 361 70.9
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 1.1e-137 493.8 325 77.8
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 1.9e-137 493.0 303 81.2
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 4.2e-137 491.9 303 81.2
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 4.2e-137 491.9 350 73.1
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 5.4e-137 491.5 327 76.1
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 1.2e-136 490.3 305 79.3
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 1.6e-136 490.0 312 78.5
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 3.5e-136 488.8 318 77.0
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 4.6e-136 488.4 350 71.7
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 6.0e-136 488.0 360 70.8
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 1.3e-135 486.9 320 77.2
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.7e-135 486.5 354 72.0
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 6.6e-135 484.6 367 70.6
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 8.7e-135 484.2 317 78.9
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 1.1e-134 483.8 318 78.9
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 3.3e-134 482.3 402 66.9
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 3.6e-133 478.8 298 78.5
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 1.8e-132 476.5 313 75.4
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 2.4e-132 476.1 334 72.5
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 4.0e-132 475.3 320 77.2
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 5.3e-132 474.9 334 72.2
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 1.5e-131 473.4 307 77.5
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 2.6e-131 472.6 307 76.5
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 3.4e-131 472.2 297 79.8
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 2.2e-130 469.5 313 74.8
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 2.9e-130 469.2 302 77.5
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 2.9e-130 469.2 313 75.1
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 8.4e-130 467.6 301 77.1
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 1.4e-129 466.8 301 77.4
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 1.4e-129 466.8 301 77.4
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 4.2e-129 465.3 327 72.8
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 1.8e-127 459.9 314 73.2
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 3.3e-126 455.7 283 78.8
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 1.2e-123 447.2 429 58.3
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 1.2e-120 437.2 300 73.3
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 1.8e-119 433.3 299 72.6
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 1.8e-116 423.3 306 70.3
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 1.5e-115 420.2 485 51.3
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 2.0e-115 419.9 307 69.7
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 2.6e-115 419.5 302 70.5
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 3.4e-115 419.1 300 70.7
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 6.5e-114 414.8 339 64.3
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 3.0e-111 406.0 288 69.4
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 2.6e-107 392.9 453 50.6
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 3.2e-105 386.0 288 71.5
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 1.1e-102 377.5 212 88.2
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 2.2e-101 373.2 305 63.9
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.3e-93 347.4 237 74.7
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 5.9e-91 338.6 305 60.3
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 6.1e-88 328.6 317 55.8
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 1.8e-87 327.0 200 81.5
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 9.1e-84 314.7 170 91.8
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 5.2e-79 298.9 203 75.4
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 9.7e-78 294.7 245 64.9
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 2.2e-77 293.5 245 64.5
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 8.3e-77 291.6 166 87.3
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 1.0e-74 284.6 355 49.6
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.9e-74 283.1 194 74.7
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 6.5e-74 282.0 194 74.2
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.1e-73 281.2 257 53.7
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 7.2e-73 278.5 189 76.7
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 1.8e-71 273.9 167 81.4
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 1.8e-68 263.8 149 86.6
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 2.0e-62 243.8 188 68.1
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 5.7e-62 242.3 144 80.6
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.7e-61 240.7 259 48.6
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 1.7e-61 240.7 211 60.7
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 2.6e-54 216.9 141 75.2
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 9.2e-44 181.8 127 73.2
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 2.2e-37 160.6 97 76.3
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 2.1e-32 144.1 238 36.1
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 1.8e-31 141.0 135 54.8
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 6.4e-29 132.5 80 82.5
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 2.8e-24 117.1 258 33.3
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.1e-23 115.2 102 54.9
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 8.1e-16 89.0 49 79.6
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis HOM05D006546 ORTHO05D008362 1.0e-10 72.0 47 76.6
Sabra02G0052700 Salix brachista HOM05D003387 ORTHO05D005400 4.8e-08 63.2 71 49.3


User provided reference genes

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