Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006956g0020 Nicotiana tabacum HOM05D001802 ORTHO05D001788 9.7e-77 290.0 143 100.0
Nitab4.5_0000782g0180 Nicotiana tabacum HOM05D001802 ORTHO05D001788 1.3e-57 226.5 121 92.6
Peaxi162Scf00171g00248 Petunia axillaris HOM05D001802 ORTHO05D001788 1.2e-50 203.4 120 84.2
Solyc03g098500.4 Solanum lycopersicum HOM05D001802 ORTHO05D001788 2.3e-46 189.1 120 75.0
PGSC0003DMG400010153 Solanum tuberosum HOM05D001802 ORTHO05D001788 3.0e-46 188.7 120 75.8
CAN.G929.27 Capsicum annuum HOM05D001802 ORTHO05D001788 6.8e-46 187.6 124 78.2
Migut.O00258 Erythranthe guttata HOM05D001802 ORTHO05D001788 6.0e-26 121.3 125 52.8
SGA_v2.0_scaffold25G10749 Striga asiatica HOM05D001802 ORTHO05D001788 3.9e-25 118.6 137 49.6
Oeu038402.1 Olea europaea HOM05D001802 ORTHO05D001788 5.6e-24 114.8 125 49.6
Cc04_g08570 Coffea canephora HOM05D001802 ORTHO05D001788 8.9e-22 107.5 130 48.5
MSTRG.11554 Avicennia marina HOM05D001802 ORTHO05D001788 1.3e-20 103.6 122 48.4
Dinv06415 Davidia involucrata HOM05D001802 ORTHO05D001788 2.2e-20 102.8 128 46.1
Lj9C413T10 Lonicera japonica HOM05D001802 ORTHO05D001788 1.4e-19 100.1 126 46.8
CSS0019512 Camellia sinensis var. sinensis HOM05D001802 ORTHO05D001788 1.7e-17 93.2 129 42.6
CSS0049571 Camellia sinensis var. sinensis HOM05D001802 ORTHO05D001788 1.7e-17 93.2 127 43.3
SalBow5G3713 Salvia bowleyana HOM05D001802 ORTHO05D001788 2.3e-17 92.8 122 44.3
Actinidia18872 Actinidia chinensis HOM05D001802 ORTHO05D001788 7.3e-16 87.8 128 41.4
DCAR_023251 Daucus carota HOM05D001802 ORTHO05D001788 1.6e-15 86.7 128 40.6
Ciclev10023943m.g Citrus clementina HOM05D001802 ORTHO05D001788 2.8e-15 85.9 134 39.6
Hma1.2p1_0493F.1_g164940 Hydrangea macrophylla HOM05D001802 ORTHO05D001788 2.3e-14 82.8 133 39.8
Prupe.5G242700 Prunus persica HOM05D001802 ORTHO05D001788 2.3e-14 82.8 130 39.2
ClCG01G014890 Citrullus lanatus HOM05D001802 ORTHO05D001788 4.4e-13 78.6 131 37.4
Sabra12G0025400 Salix brachista HOM05D001802 ORTHO05D001788 6.4e-12 74.7 137 36.5
Sed0026984 Sechium edule HOM05D001802 ORTHO05D001788 1.9e-11 73.2 132 34.1
MD06G1238800 Malus domestica HOM05D001802 ORTHO05D001788 9.2e-11 70.9 131 36.6
FvH4_5g18300 Fragaria vesca HOM05D001802 ORTHO05D001788 2.1e-10 69.7 130 36.9
Manes.02G213308 Manihot esculenta HOM05D001802 ORTHO05D001788 2.1e-10 69.7 128 36.7
FAN08G2415 Fragaria x ananassa HOM05D001802 ORTHO05D001788 2.7e-10 69.3 130 36.9
Lalb_Chr16g0386631 Lupinus albus HOM05D001802 ORTHO05D001788 3.5e-10 68.9 133 38.3
Sed0000369 Sechium edule HOM05D001802 ORTHO05D001788 6.0e-10 68.2 129 34.1
Thhalv10021376m.g Eutrema salsugineum HOM05D001802 ORTHO05D001788 7.8e-10 67.8 129 38.0
RcHm_v2.0_Chr7g0177281 Rosa chinensis HOM05D001802 ORTHO05D001788 1.0e-09 67.4 132 37.1
C01p46560 Brassica napus HOM05D000482 ORTHO05D000349 3.0e-09 65.9 148 35.8
AT3G17660 Arabidopsis thaliana HOM05D001802 ORTHO05D001788 8.6e-09 64.3 128 37.5
Carub.0003s1737 Capsella rubella HOM05D001802 ORTHO05D001788 1.9e-08 63.2 127 35.4
PGR083G2059 Punica granatum HOM05D001802 ORTHO05D001788 1.9e-08 63.2 127 35.4
BolC1t04621H Brassica oleracea HOM05D000482 ORTHO05D000349 3.3e-08 62.4 132 36.4
MELO3C002160.2 Cucumis melo HOM05D001802 ORTHO05D001788 5.6e-08 61.6 157 29.3
BolC5t33609H Brassica oleracea HOM05D001802 ORTHO05D001788 9.5e-08 60.8 147 32.7
C05p48730 Brassica napus HOM05D001802 ORTHO05D001788 6.2e-07 58.2 130 34.6
BcaB04g20827 Brassica carinata HOM05D001802 ORTHO05D001788 8.1e-07 57.8 130 36.2
Phvul.002G333500 Phaseolus vulgaris HOM05D001802 ORTHO05D001788 1.4e-06 57.0 125 34.4
BcaB06g25826 Brassica carinata HOM05D001802 ORTHO05D001788 2.4e-06 56.2 130 37.7
Glyma.08G057700 Glycine max HOM05D001802 ORTHO05D001788 4.0e-06 55.5 132 33.3
CANSAT64G2226 Cannabis sativa HOM05D001802 ORTHO05D001788 6.8e-06 54.7 121 31.4


User provided reference genes

Program Settings