Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 0.0e+00 1159.1 589 100.0
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 0.0e+00 1090.5 609 93.4
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 5.8e-293 1010.4 590 88.8
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 3.1e-278 961.4 598 84.1
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 8.7e-273 943.3 599 82.6
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 1.8e-270 935.6 599 82.3
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 6.9e-262 907.1 592 81.2
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 6.1e-234 814.3 609 71.1
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 6.9e-230 800.8 586 70.5
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 1.5e-229 799.7 609 70.3
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 2.0e-229 799.3 595 69.2
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 4.5e-229 798.1 591 71.7
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 5.7e-224 781.2 591 69.5
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 1.0e-220 770.4 600 66.5
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 4.2e-219 765.0 602 68.9
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 5.5e-219 764.6 608 66.4
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 5.2e-217 758.1 599 66.4
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 1.5e-216 756.5 628 63.2
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 7.5e-216 754.2 599 67.6
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 2.7e-213 745.7 607 66.9
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 5.9e-213 744.6 588 64.3
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 1.7e-212 743.0 616 63.0
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 1.9e-211 739.6 601 66.9
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 9.4e-211 737.3 589 66.9
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 6.8e-209 731.1 594 63.1
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 6.8e-209 731.1 593 63.6
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 2.4e-206 722.6 597 63.0
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 9.1e-206 720.7 609 62.1
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 7.2e-203 711.1 592 61.5
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 1.6e-202 709.9 594 62.1
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 4.4e-200 701.8 620 60.0
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 7.5e-200 701.0 592 61.0
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 9.8e-200 700.7 599 61.1
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 1.1e-198 697.2 627 58.2
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 7.0e-198 694.5 595 60.8
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 2.0e-197 693.0 611 61.2
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 2.0e-197 693.0 597 60.1
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 2.0e-197 693.0 547 65.1
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 7.8e-197 691.0 612 62.4
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 7.8e-197 691.0 611 58.3
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 2.3e-196 689.5 613 58.1
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 6.6e-196 688.0 617 57.9
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 8.6e-196 687.6 617 59.0
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 1.1e-195 687.2 606 57.8
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 4.7e-194 681.8 604 59.8
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 6.8e-193 677.9 596 59.4
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 6.8e-193 677.9 556 61.7
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 8.9e-193 677.6 586 59.6
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 8.9e-193 677.6 613 58.1
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 2.0e-192 676.4 628 57.6
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 3.4e-192 675.6 585 58.5
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 4.4e-192 675.2 609 58.9
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 9.8e-192 674.1 587 59.3
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 2.9e-191 672.5 615 60.0
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 8.3e-191 671.0 612 57.7
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 4.6e-189 665.2 599 59.4
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 1.3e-188 663.7 622 57.4
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 1.7e-188 663.3 606 57.6
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 2.3e-188 662.9 607 57.2
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 1.5e-187 660.2 562 60.5
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 2.5e-187 659.4 605 58.0
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 2.5e-187 659.4 538 61.5
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 2.5e-187 659.4 601 56.9
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 3.3e-187 659.1 600 57.3
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 3.3e-187 659.1 619 57.0
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 3.3e-187 659.1 611 57.6
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 3.3e-187 659.1 578 59.9
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 2.8e-186 656.0 611 57.1
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 2.8e-186 656.0 612 56.9
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 2.8e-186 656.0 611 57.1
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 3.6e-186 655.6 612 58.3
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 6.2e-186 654.8 619 56.7
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 8.0e-186 654.4 606 55.6
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 1.1e-185 654.1 624 57.4
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 1.8e-185 653.3 601 55.9
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 6.8e-185 651.4 610 56.7
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 8.9e-185 651.0 615 56.3
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 8.9e-185 651.0 486 71.2
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 3.4e-184 649.0 492 65.9
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 1.7e-183 646.7 621 55.4
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 2.9e-183 646.0 619 55.4
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 3.7e-183 645.6 619 55.3
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 8.3e-183 644.4 618 56.6
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.1e-179 634.0 572 58.4
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 4.3e-179 632.1 473 67.0
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 3.6e-178 629.0 607 54.7
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 8.1e-178 627.9 571 58.0
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 2.0e-176 623.2 564 60.8
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 4.4e-176 622.1 532 59.8
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 2.7e-173 612.8 537 60.0
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 2.7e-173 612.8 612 54.1
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 4.6e-165 585.5 548 58.2
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 3.4e-160 569.3 617 53.2
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 9.6e-155 551.2 568 51.4
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 8.4e-143 511.5 355 65.1
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 1.8e-140 503.8 631 46.6
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 5.6e-139 498.8 528 52.3
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 4.5e-136 489.2 436 58.9
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 7.9e-133 478.4 539 48.8
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 2.1e-125 453.8 416 57.2
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 2.8e-106 390.2 354 59.3
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 1.9e-102 377.5 342 59.6
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 4.1e-81 306.6 468 38.5
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 4.3e-46 190.3 282 38.3
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 5.8e-43 179.9 461 30.2
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 2.9e-42 177.6 567 29.5
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 2.1e-40 171.4 474 31.2
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 1.9e-38 164.9 307 31.6
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 1.3e-31 142.1 90 70.0
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 3.0e-31 141.0 93 68.8
Dinv02793 Davidia involucrata HOM05D006614 ORTHO05D008217 6.7e-31 139.8 92 76.1
Psat0s3066g0040 Pisum sativum HOM05D006614 ORTHO05D008217 3.9e-23 114.0 75 66.7
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 1.7e-18 98.6 232 28.4
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 2.2e-18 98.2 85 54.1
Cfa001947 Carpinus fangiana HOM05D006614 ORTHO05D008217 3.8e-18 97.4 83 60.2
FAN21G3229 Fragaria x ananassa HOM05D006614 ORTHO05D008217 5.0e-18 97.1 69 60.9
Aqoxy3G00115 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 1.6e-13 82.0 75 56.0
HPP92_015861 Vanilla planifolia HOM05D006614 ORTHO05D008217 9.7e-06 56.2 30 83.3


User provided reference genes

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