Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006949g0050 Nicotiana tabacum HOM05D004614 ORTHO05D005339 4.5e-70 267.7 126 100.0
Nitab4.5_0010763g0030 Nicotiana tabacum HOM05D004614 ORTHO05D005339 2.0e-09 66.2 76 48.7
QL02p013984 Quercus lobata HOM05D004614 ORTHO05D005339 3.4e-09 65.5 48 66.7
HPP92_020707 Vanilla planifolia HOM05D004614 ORTHO05D005339 3.4e-09 65.5 49 63.3
Aa31LG8G13830 Aethionema arabicum HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
Aqoxy6G01739 Aquilegia oxysepala HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
AL1G51310 Arabidopsis lyrata HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
AT1G42430 Arabidopsis thaliana HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
BcaB04g17805 Brassica carinata HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
BcaC07g37479 Brassica carinata HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
A08p07800 Brassica napus HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
C08p09450 Brassica napus HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
BolC8t47801H Brassica oleracea HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
BraA08t32800Z Brassica rapa HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
Carub.0001s3422 Capsella rubella HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
CARHR292380 Cardamine hirsuta HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
Cfa014064 Carpinus fangiana HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
AUR62036884 Chenopodium quinoa HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
ClCG08G009480 Citrullus lanatus HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
Cc10_g00730 Coffea canephora HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
MELO3C026543.2 Cucumis melo HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
DCAR_016768 Daucus carota HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
Migut.C00954 Erythranthe guttata HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
Thhalv10004272m.g Eutrema salsugineum HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
Hma1.2p1_0507F.1_g168400 Hydrangea macrophylla HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
Sp1g32010 Schrenkiella parvula HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
Sed0024410 Sechium edule HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
THA.LOC104813167 Tarenaya hassleriana HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
TWI56G0787 Tripterygium wilfordii HOM05D004614 ORTHO05D005339 5.8e-09 64.7 32 84.4
Lalb_Chr11g0061661 Lupinus albus HOM05D004614 ORTHO05D005339 1.3e-08 63.5 32 81.2
Peaxi162Scf00064g01132 Petunia axillaris HOM05D004614 ORTHO05D005339 1.3e-08 63.5 32 81.2
Solyc12g094570.1 Solanum lycopersicum HOM05D004614 ORTHO05D005339 1.3e-08 63.5 32 81.2
Sopen12g031480 Solanum pennellii HOM05D004614 ORTHO05D005339 1.3e-08 63.5 32 81.2
Duzib093G0152 Durio zibethinus HOM05D004614 ORTHO05D005339 1.7e-08 63.2 32 81.2
FvH4_2g37530 Fragaria vesca HOM05D004614 ORTHO05D005339 1.7e-08 63.2 46 63.0
FAN15G3067 Fragaria x ananassa HOM05D004614 ORTHO05D005339 1.7e-08 63.2 46 63.0
FAN20G3039 Fragaria x ananassa HOM05D004614 ORTHO05D005339 1.7e-08 63.2 46 63.0
FAN27G1062 Fragaria x ananassa HOM05D004614 ORTHO05D005339 1.7e-08 63.2 46 63.0
Peaxi162Scf00893g00434 Petunia axillaris HOM05D004614 ORTHO05D005339 1.7e-08 63.2 31 83.9
RcHm_v2.0_Chr6g0304201 Rosa chinensis HOM05D004614 ORTHO05D005339 1.7e-08 63.2 46 63.0
Ca_15438_v3 Cicer arietinum L. HOM05D004614 ORTHO05D005339 2.2e-08 62.8 32 81.2
Glyma.04G018400 Glycine max HOM05D004614 ORTHO05D005339 2.2e-08 62.8 32 81.2
Glyma.06G018700 Glycine max HOM05D004614 ORTHO05D005339 2.2e-08 62.8 32 81.2
HanXRQChr15g0492731 Helianthus annuus HOM05D004614 ORTHO05D005339 2.2e-08 62.8 32 81.2
Lj4A805T24 Lonicera japonica HOM05D004614 ORTHO05D005339 2.2e-08 62.8 32 81.2
Lj1g0005022 Lotus japonicus HOM05D004614 ORTHO05D005339 2.2e-08 62.8 32 81.2
Medtr3g115210 Medicago truncatula HOM05D004614 ORTHO05D005339 2.2e-08 62.8 32 81.2
Oeu056211.1 Olea europaea HOM05D004614 ORTHO05D005339 2.2e-08 62.8 48 62.5
Phvul.009G010200 Phaseolus vulgaris HOM05D004614 ORTHO05D005339 2.2e-08 62.8 32 81.2
Psat5g011520 Pisum sativum HOM05D004614 ORTHO05D005339 2.2e-08 62.8 32 81.2
TPR.G38127 Trifolium pratense HOM05D004614 ORTHO05D005339 2.2e-08 62.8 32 81.2
VMungo1309G2703 Vigna mungo HOM05D004614 ORTHO05D005339 2.2e-08 62.8 32 81.2
Sc15g0004500 Simmondsia chinensis HOM05D004614 ORTHO05D005339 4.9e-08 61.6 31 80.6
MD07G1011800 Malus domestica HOM05D004614 ORTHO05D005339 6.4e-08 61.2 32 81.2
Potri.002G011300 Populus trichocarpa HOM05D004614 ORTHO05D005339 8.4e-08 60.8 32 78.1
vmacro21824 Vaccinium macrocarpon HOM05D004614 ORTHO05D005339 8.4e-08 60.8 32 78.1
Mapoly0189s0007 Marchantia polymorpha HOM05D004614 ORTHO05D005339 1.4e-07 60.1 48 56.2
SMO169G0316 Selaginella moellendorffii HOM05D004614 ORTHO05D005339 1.4e-07 60.1 33 75.8
EL10Ac1g01976 Beta vulgaris HOM05D004614 ORTHO05D005339 1.9e-07 59.7 31 80.6
Pp3c7_400 Physcomitrium patens HOM05D004614 ORTHO05D005339 1.9e-07 59.7 32 75.0
Nn5g30931 Nelumbo nucifera HOM05D004614 ORTHO05D005339 2.4e-07 59.3 32 78.1
Pp3c11_25930 Physcomitrium patens HOM05D004614 ORTHO05D005339 2.4e-07 59.3 32 71.9
unitig_82.g27116 Utricularia gibba HOM05D004614 ORTHO05D005339 3.2e-07 58.9 32 75.0
PSO541G0908 Papaver somniferum HOM05D004614 ORTHO05D005339 9.3e-07 57.4 28 85.7
PSO675G0524 Papaver somniferum HOM05D004614 ORTHO05D005339 9.3e-07 57.4 28 85.7
TAR376G0430 Trochodendron aralioides HOM05D004614 ORTHO05D005339 1.2e-06 57.0 31 74.2
Ah.00g000370 Amaranthus hybridus HOM05D004614 ORTHO05D005339 2.1e-06 56.2 28 85.7
CSS0048285 Camellia sinensis var. sinensis HOM05D004614 ORTHO05D005339 2.1e-06 56.2 28 85.7
CANSAT25G1550 Cannabis sativa HOM05D004614 ORTHO05D005339 2.1e-06 56.2 28 85.7
Ciclev10001231m.g Citrus clementina HOM05D004614 ORTHO05D005339 2.1e-06 56.2 28 85.7
CsaV3_6G031620 Cucumis sativus L. HOM05D004614 ORTHO05D005339 2.1e-06 56.2 28 85.7
MD08G1002900 Malus domestica HOM05D004614 ORTHO05D005339 2.1e-06 56.2 28 85.7
MD15G1002600 Malus domestica HOM05D004614 ORTHO05D005339 2.1e-06 56.2 28 85.7
Prupe.1G354900 Prunus persica HOM05D004614 ORTHO05D005339 2.1e-06 56.2 28 85.7
PGR031G0851 Punica granatum HOM05D004614 ORTHO05D005339 2.1e-06 56.2 28 85.7
SGA_v2.0_scaffold275G46591 Striga asiatica HOM05D004614 ORTHO05D005339 2.1e-06 56.2 28 85.7
Thecc.08G058000 Theobroma cacao HOM05D004614 ORTHO05D005339 2.1e-06 56.2 28 85.7
TWI36G0356 Tripterygium wilfordii HOM05D004614 ORTHO05D005339 2.1e-06 56.2 28 85.7
vmacro04401 Vaccinium macrocarpon HOM05D004614 ORTHO05D005339 2.1e-06 56.2 28 85.7
GSVIVG01008677001 Vitis vinifera HOM05D004614 ORTHO05D005339 2.1e-06 56.2 28 85.7
Manes.05G134900 Manihot esculenta HOM05D004614 ORTHO05D005339 4.6e-06 55.1 28 82.1
PGSC0003DMG400029318 Solanum tuberosum HOM05D004614 ORTHO05D005339 4.6e-06 55.1 28 82.1


User provided reference genes

Program Settings