Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 6.3e-137 490.7 242 100.0
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 2.9e-134 481.9 242 98.3
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 9.1e-128 460.3 243 95.9
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 8.6e-126 453.8 243 93.4
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 2.8e-124 448.7 243 94.7
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 6.1e-124 447.6 243 94.2
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 6.1e-124 447.6 243 94.2
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 4.0e-115 418.3 236 87.7
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 8.9e-115 417.2 242 86.8
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 2.6e-114 415.6 237 87.8
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 2.6e-114 415.6 232 87.5
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 1.7e-113 412.9 229 90.4
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 2.2e-113 412.5 224 90.2
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 1.1e-112 410.2 231 90.5
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 1.4e-112 409.8 225 88.4
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 3.2e-112 408.7 237 83.5
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 5.4e-112 407.9 236 86.4
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 7.0e-112 407.5 238 84.5
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 9.2e-112 407.1 225 88.9
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 9.2e-112 407.1 237 85.7
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 2.0e-111 406.0 237 85.7
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 4.6e-111 404.8 237 84.8
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 4.6e-111 404.8 225 89.3
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 2.3e-110 402.5 228 88.2
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 5.0e-110 401.4 249 81.1
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 5.0e-110 401.4 249 81.1
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 6.6e-110 401.0 232 85.3
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 1.9e-109 399.4 242 85.5
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 3.3e-109 398.7 236 83.1
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 5.6e-109 397.9 232 85.3
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 7.3e-109 397.5 230 84.3
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 7.3e-109 397.5 233 85.0
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 1.2e-108 396.7 238 83.2
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 1.2e-108 396.7 219 88.6
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 1.2e-108 396.7 238 81.5
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 1.6e-108 396.4 240 82.9
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 2.1e-108 396.0 232 84.1
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 2.8e-108 395.6 235 82.6
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 8.0e-108 394.0 221 86.0
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 1.4e-107 393.3 232 84.1
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 1.4e-107 393.3 234 84.2
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 1.4e-107 393.3 234 84.2
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 3.1e-107 392.1 232 86.2
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 4.0e-107 391.7 240 82.1
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 5.2e-107 391.3 245 81.2
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 8.9e-107 390.6 250 81.2
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 2.0e-106 389.4 215 90.2
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 4.4e-106 388.3 240 81.2
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 5.8e-106 387.9 237 82.7
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 2.9e-105 385.6 240 79.6
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 3.7e-105 385.2 225 86.7
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 8.3e-105 384.0 238 81.5
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 1.1e-104 383.6 238 81.1
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 3.2e-104 382.1 244 80.3
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 5.4e-104 381.3 226 87.2
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 1.6e-103 379.8 247 78.9
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 3.5e-103 378.6 226 84.1
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 1.0e-102 377.1 221 83.3
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 5.6e-101 371.3 235 80.9
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 1.2e-100 370.2 246 77.2
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 8.1e-100 367.5 237 76.8
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 4.0e-99 365.2 242 78.9
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 4.0e-99 365.2 242 78.9
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 5.2e-99 364.8 234 79.5
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.2e-98 363.6 234 79.5
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 4.4e-98 361.7 201 89.1
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 2.4e-96 355.9 253 73.9
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 1.5e-93 346.7 219 75.3
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 7.3e-93 344.4 224 73.2
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 1.6e-92 343.2 229 74.7
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 1.6e-92 343.2 196 84.7
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 1.4e-91 340.1 200 85.5
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 4.0e-91 338.6 230 74.3
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 7.6e-90 334.3 233 72.1
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 7.6e-90 334.3 247 70.4
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 7.6e-90 334.3 234 73.5
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 2.2e-89 332.8 247 70.0
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 1.1e-88 330.5 231 73.2
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 2.4e-88 329.3 237 69.2
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 5.4e-88 328.2 234 73.9
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 7.1e-88 327.8 175 91.4
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 1.3e-86 323.6 229 70.3
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 6.6e-86 321.2 225 72.4
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 8.7e-86 320.9 198 82.3
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 2.1e-76 289.7 249 62.7
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 9.3e-72 274.2 230 60.0
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 1.5e-69 266.9 215 67.9
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 1.9e-64 250.0 139 89.9
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 1.2e-63 247.3 139 87.1
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 1.3e-60 237.3 211 53.1
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 2.1e-60 236.5 150 77.3
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 2.4e-59 233.0 163 76.1
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 4.5e-58 228.8 229 50.7
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 1.0e-54 217.6 243 50.2
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 1.8e-30 137.1 82 79.3
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 7.2e-24 115.2 225 31.6
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 2.8e-20 103.2 120 50.8
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 9.8e-13 78.2 100 48.0


User provided reference genes

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