Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006945g0010 Nicotiana tabacum HOM05D004998 ORTHO05D006104 9.7e-69 263.8 186 100.0
Nitab4.5_0000272g0050 Nicotiana tabacum HOM05D004998 ORTHO05D006104 4.5e-58 228.4 195 72.3
Nitab4.5_0007132g0030 Nicotiana tabacum HOM05D004998 ORTHO05D006104 4.5e-58 228.4 169 94.1
PGSC0003DMG400002149 Solanum tuberosum HOM05D004998 ORTHO05D006104 2.6e-45 186.0 188 59.0
Solyc06g005600.3 Solanum lycopersicum HOM05D004998 ORTHO05D006104 4.4e-45 185.3 187 59.4
Sopen06g001560 Solanum pennellii HOM05D004998 ORTHO05D006104 4.4e-45 185.3 187 59.4
Peaxi162Scf00092g01117 Petunia axillaris HOM05D004998 ORTHO05D006104 3.5e-42 175.6 187 57.2
Lj1A149T62 Lonicera japonica HOM05D004998 ORTHO05D006104 5.5e-32 141.7 188 47.3
Dinv17028 Davidia involucrata HOM05D004998 ORTHO05D006104 7.2e-32 141.4 188 48.4
Dinv42976 Davidia involucrata HOM05D004998 ORTHO05D006104 7.2e-32 141.4 188 48.4
Dinv43123 Davidia involucrata HOM05D004998 ORTHO05D006104 7.2e-32 141.4 188 48.4
Peaxi162Scf00122g01415 Petunia axillaris HOM05D004998 ORTHO05D006104 2.1e-31 139.8 188 49.5
Rhsim13G0078800 Rhododendron simsii HOM05D004998 ORTHO05D006104 3.7e-28 129.0 189 47.6
CSS0033668 Camellia sinensis var. sinensis HOM05D004998 ORTHO05D006104 5.4e-27 125.2 189 44.4
Actinidia23927 Actinidia chinensis HOM05D004998 ORTHO05D006104 2.0e-26 123.2 188 45.2
GSVIVG01024930001 Vitis vinifera HOM05D004998 ORTHO05D006104 1.0e-25 120.9 189 42.9
Hma1.2p1_0615F.1_g189810 Hydrangea macrophylla HOM05D004998 ORTHO05D006104 1.3e-25 120.6 189 42.3
vmacro03047 Vaccinium macrocarpon HOM05D004998 ORTHO05D006104 1.3e-25 120.6 189 44.4
CSS0032367 Camellia sinensis var. sinensis HOM05D004998 ORTHO05D006104 1.7e-25 120.2 187 44.9
AUR62009547 Chenopodium quinoa HOM05D004998 ORTHO05D006104 2.9e-25 119.4 186 41.9
Actinidia34418 Actinidia chinensis HOM05D004998 ORTHO05D006104 6.6e-25 118.2 188 43.6
Eucgr.B02327 Eucalyptus grandis HOM05D004998 ORTHO05D006104 6.6e-25 118.2 188 41.0
SGA_v2.0_scaffold41G15739 Striga asiatica HOM05D004998 ORTHO05D006104 8.6e-25 117.9 191 43.5
AUR62001761 Chenopodium quinoa HOM05D004998 ORTHO05D006104 1.1e-24 117.5 186 41.4
TWI75G0636 Tripterygium wilfordii HOM05D004998 ORTHO05D006104 1.5e-24 117.1 189 42.9
Cfa011521 Carpinus fangiana HOM05D004998 ORTHO05D006104 2.5e-24 116.3 187 42.2
HanXRQChr07g0197281 Helianthus annuus HOM05D004998 ORTHO05D006104 5.5e-24 115.2 185 43.8
Ciclev10029345m.g Citrus clementina HOM05D004998 ORTHO05D006104 9.5e-24 114.4 187 42.8
Migut.D02075 Erythranthe guttata HOM05D004998 ORTHO05D006104 9.5e-24 114.4 189 43.9
DCAR_005961 Daucus carota HOM05D004998 ORTHO05D006104 1.2e-23 114.0 187 40.1
Prupe.6G073200 Prunus persica HOM05D004998 ORTHO05D006104 1.2e-23 114.0 187 42.2
PGR102G0830 Punica granatum HOM05D004998 ORTHO05D006104 1.6e-23 113.6 203 39.9
Cc01_g13080 Coffea canephora HOM05D004998 ORTHO05D006104 2.1e-23 113.2 188 40.4
QL01p031100 Quercus lobata HOM05D004998 ORTHO05D006104 2.8e-23 112.8 189 47.6
TWI79G0863 Tripterygium wilfordii HOM05D004998 ORTHO05D006104 2.8e-23 112.8 192 44.3
SalBow3G1756 Salvia bowleyana HOM05D004998 ORTHO05D006104 3.6e-23 112.5 206 40.3
Hund18896 Selenicereus undatus HOM05D004998 ORTHO05D006104 3.6e-23 112.5 187 39.6
EL10Ac7g16043 Beta vulgaris HOM05D004998 ORTHO05D006104 8.0e-23 111.3 188 42.6
Nn2g11147 Nelumbo nucifera HOM05D004998 ORTHO05D006104 1.0e-22 110.9 192 40.6
Potri.009G033400 Populus trichocarpa HOM05D004998 ORTHO05D006104 1.0e-22 110.9 185 43.2
Lalb_Chr03g0026531 Lupinus albus HOM05D004998 ORTHO05D006104 2.3e-22 109.8 188 39.9
THA.LOC104810769 Tarenaya hassleriana HOM05D004998 ORTHO05D006104 2.3e-22 109.8 187 40.6
HanXRQChr12g0374241 Helianthus annuus HOM05D004998 ORTHO05D006104 3.0e-22 109.4 108 57.4
MSTRG.18567 Avicennia marina HOM05D004998 ORTHO05D006104 4.0e-22 109.0 191 42.4
arahy.Tifrunner.gnm1.ann1.AD2TJP Arachis hypogaea HOM05D004998 ORTHO05D006104 8.9e-22 107.8 84 66.7
CiPaw.14G067400 Carya illinoinensis HOM05D004998 ORTHO05D006104 8.9e-22 107.8 188 42.6
ECA247G2861 Erigeron canadensis HOM05D004998 ORTHO05D006104 1.2e-21 107.5 192 41.7
Thecc.09G318900 Theobroma cacao HOM05D004998 ORTHO05D006104 1.2e-21 107.5 185 41.1
Lsat_1_v5_gn_9_23841 Lactuca sativa HOM05D004998 ORTHO05D006104 1.5e-21 107.1 187 41.7
TAR636G1117 Trochodendron aralioides HOM05D004998 ORTHO05D006104 1.5e-21 107.1 193 39.4
Manes.01G171600 Manihot esculenta HOM05D004998 ORTHO05D006104 5.7e-21 105.1 190 40.0
Sabra09G0023800 Salix brachista HOM05D004998 ORTHO05D006104 7.5e-21 104.8 181 42.0
Atru.chr3.3979 Acer truncatum HOM05D004998 ORTHO05D006104 1.3e-20 104.0 190 40.0
arahy.Tifrunner.gnm1.ann1.JSTV8M Arachis hypogaea HOM05D004998 ORTHO05D006104 1.3e-20 104.0 188 39.4
MELO3C025903.2 Cucumis melo HOM05D004998 ORTHO05D006104 2.2e-20 103.2 86 64.0
TAR633G0520 Trochodendron aralioides HOM05D004998 ORTHO05D006104 2.2e-20 103.2 190 38.9
Aqoxy1G00915 Aquilegia oxysepala HOM05D004998 ORTHO05D006104 2.8e-20 102.8 189 39.2
ClCG02G020020 Citrullus lanatus HOM05D004998 ORTHO05D006104 2.8e-20 102.8 190 41.1
MD03G1088800 Malus domestica HOM05D004998 ORTHO05D006104 2.8e-20 102.8 188 40.4
MD11G1097800 Malus domestica HOM05D004998 ORTHO05D006104 3.7e-20 102.4 188 39.9
Phvul.L006843 Phaseolus vulgaris HOM05D004998 ORTHO05D006104 3.7e-20 102.4 188 36.7
Gohir.D05G094800 Gossypium hirsutum HOM05D004998 ORTHO05D006104 4.9e-20 102.1 185 38.4
Duzib150G0269 Durio zibethinus HOM05D004998 ORTHO05D006104 8.3e-20 101.3 185 40.0
Glyma.15G036800 Glycine max HOM05D004998 ORTHO05D006104 1.1e-19 100.9 190 37.9
CsaV3_6G016720 Cucumis sativus L. HOM05D004998 ORTHO05D006104 1.4e-19 100.5 193 38.9
Gohir.A05G094300 Gossypium hirsutum HOM05D004998 ORTHO05D006104 1.4e-19 100.5 185 38.4
Gohir.D03G123600 Gossypium hirsutum HOM05D004998 ORTHO05D006104 1.4e-19 100.5 104 56.7
Lj3g0014072 Lotus japonicus HOM05D004998 ORTHO05D006104 1.4e-19 100.5 190 38.4
Ah.08g219770 Amaranthus hybridus HOM05D004998 ORTHO05D006104 1.8e-19 100.1 193 37.8
COL.COLO4_18543 Corchorus olitorius HOM05D004998 ORTHO05D006104 1.8e-19 100.1 185 39.5
Gohir.A03G043800 Gossypium hirsutum HOM05D004998 ORTHO05D006104 1.8e-19 100.1 99 59.6
Duzib168G2185 Durio zibethinus HOM05D004998 ORTHO05D006104 3.1e-19 99.4 182 38.5
VMungo1080G1028 Vigna mungo HOM05D004998 ORTHO05D006104 3.1e-19 99.4 187 35.8
Haze_24126 Corylus avellana HOM05D004998 ORTHO05D006104 4.1e-19 99.0 89 60.7
Glyma.13G337700 Glycine max HOM05D004998 ORTHO05D006104 4.1e-19 99.0 190 38.9
Nn2g13381 Nelumbo nucifera HOM05D004998 ORTHO05D006104 5.4e-19 98.6 186 46.2
Gorai.009G098000 Gossypium raimondii HOM05D004998 ORTHO05D006104 7.0e-19 98.2 182 38.5
MBI14_g12121_MAGBIO Magnolia biondii HOM05D004998 ORTHO05D006104 7.0e-19 98.2 191 37.7
CiPaw.13G091800 Carya illinoinensis HOM05D004998 ORTHO05D006104 1.2e-18 97.4 180 41.7
Gorai.003G130300 Gossypium raimondii HOM05D004998 ORTHO05D006104 1.2e-18 97.4 104 55.8
CARHR285830 Cardamine hirsuta HOM05D004998 ORTHO05D006104 2.7e-18 96.3 187 37.4
Dinv06259 Davidia involucrata HOM05D004998 ORTHO05D006104 2.7e-18 96.3 99 58.6
FvH4_3g36750 Fragaria vesca HOM05D004998 ORTHO05D006104 3.5e-18 95.9 189 40.7
ATR0559G067 Amborella trichopoda HOM05D004998 ORTHO05D006104 7.8e-18 94.7 183 36.6
PSO339G2709 Papaver somniferum HOM05D004998 ORTHO05D006104 7.8e-18 94.7 100 53.0
HPP92_006623 Vanilla planifolia HOM05D004998 ORTHO05D006104 7.8e-18 94.7 109 52.3
Thhalv10014846m.g Eutrema salsugineum HOM05D004998 ORTHO05D006104 1.0e-17 94.4 193 37.3
CANSAT54G1321 Cannabis sativa HOM05D004998 ORTHO05D006104 1.3e-17 94.0 109 53.2
Sed0008555 Sechium edule HOM05D004998 ORTHO05D006104 3.9e-17 92.4 89 61.8
BcaC03g14012 Brassica carinata HOM05D004998 ORTHO05D006104 5.0e-17 92.0 198 36.9
C02p12480 Brassica napus HOM05D004998 ORTHO05D006104 5.0e-17 92.0 198 36.9
BolC2t07348H Brassica oleracea HOM05D004998 ORTHO05D006104 5.0e-17 92.0 198 36.9
BraA02t05793Z Brassica rapa HOM05D004998 ORTHO05D006104 5.0e-17 92.0 208 36.5
Carub.0008s2013 Capsella rubella HOM05D004998 ORTHO05D006104 5.0e-17 92.0 185 36.2
A02p07120 Brassica napus HOM05D004998 ORTHO05D006104 6.6e-17 91.7 195 35.9
AL8G35930 Arabidopsis lyrata HOM05D004998 ORTHO05D006104 8.6e-17 91.3 185 36.2
Cpa.g.sc81.121 Carica papaya HOM05D004998 ORTHO05D006104 1.5e-16 90.5 78 67.9
Medtr2g097480 Medicago truncatula HOM05D004998 ORTHO05D006104 1.9e-16 90.1 109 51.4
TPR.G5593 Trifolium pratense HOM05D004998 ORTHO05D006104 1.9e-16 90.1 190 45.8
FAN11G2014 Fragaria x ananassa HOM05D004998 ORTHO05D006104 3.3e-16 89.4 190 37.9
RcHm_v2.0_Chr5g0065711 Rosa chinensis HOM05D004998 ORTHO05D006104 4.3e-16 89.0 188 39.4
AT5G59460 Arabidopsis thaliana HOM05D004998 ORTHO05D006104 5.6e-16 88.6 190 36.3
CDE02G2808 Ceratophyllum demersum HOM05D004998 ORTHO05D006104 5.6e-16 88.6 185 36.2
Oeu053883.1 Olea europaea HOM05D004998 ORTHO05D006104 7.3e-16 88.2 186 39.8
C03p13690 Brassica napus HOM05D004998 ORTHO05D006104 9.5e-16 87.8 204 35.8
Sp6g21150 Schrenkiella parvula HOM05D004998 ORTHO05D006104 9.5e-16 87.8 202 34.7
BcaB05g22508 Brassica carinata HOM05D004998 ORTHO05D006104 1.2e-15 87.4 195 34.9
Os01g0144600 Oryza sativa ssp. japonica HOM05D004998 ORTHO05D006104 1.2e-15 87.4 198 36.9
BcaB08g36256 Brassica carinata HOM05D004998 ORTHO05D006104 1.6e-15 87.0 98 51.0
CDE08G1537 Ceratophyllum demersum HOM05D004998 ORTHO05D006104 1.6e-15 87.0 108 48.1
FAN21G1380 Fragaria x ananassa HOM05D004998 ORTHO05D006104 3.6e-15 85.9 196 36.7
BraA10t43749Z Brassica rapa HOM05D004998 ORTHO05D006104 4.7e-15 85.5 82 56.1
Sc12g0001370 Simmondsia chinensis HOM05D004998 ORTHO05D006104 6.1e-15 85.1 135 40.7
A10p16680 Brassica napus HOM05D004998 ORTHO05D006104 1.4e-14 84.0 81 55.6
Psat5g285160 Pisum sativum HOM05D004998 ORTHO05D006104 2.3e-14 83.2 186 38.7
C09p51870 Brassica napus HOM05D004998 ORTHO05D006104 4.0e-14 82.4 88 55.7
Zm00001eb124480 Zea mays HOM05D004998 ORTHO05D006104 8.9e-14 81.3 85 55.3
BcaC04g19766 Brassica carinata HOM05D004998 ORTHO05D006104 1.2e-13 80.9 86 58.1
BolC9t58049H Brassica oleracea HOM05D004998 ORTHO05D006104 1.2e-13 80.9 86 58.1
BolC3t13819H Brassica oleracea HOM05D004998 ORTHO05D006104 2.0e-13 80.1 83 54.2
FAN16G3214 Fragaria x ananassa HOM05D004998 ORTHO05D006104 3.4e-13 79.3 209 35.4
Aa31LG4G15620 Aethionema arabicum HOM05D004998 ORTHO05D006104 7.5e-13 78.2 184 35.3
Thhalv10002686m.g Eutrema salsugineum HOM05D004998 ORTHO05D006104 7.5e-13 78.2 86 55.8
Aa31LG1G11810 Aethionema arabicum HOM05D000959 ORTHO05D000775 1.9e-11 73.6 178 37.6
FAN21G1361 Fragaria x ananassa HOM05D004998 ORTHO05D006104 2.4e-11 73.2 109 40.4
FAN25G2664 Fragaria x ananassa HOM05D004998 ORTHO05D006104 2.4e-11 73.2 109 40.4
FvH4_3g41460 Fragaria vesca HOM05D004998 ORTHO05D006104 3.2e-11 72.8 109 40.4
FAN11G1834 Fragaria x ananassa HOM05D004998 ORTHO05D006104 3.2e-11 72.8 109 40.4
BcaB08g36255 Brassica carinata HOM05D004998 ORTHO05D006104 5.4e-11 72.0 83 60.2
Pp3c16_15780 Physcomitrium patens HOM05D004998 ORTHO05D006104 6.6e-09 65.1 104 38.5
C03p13710 Brassica napus HOM05D004998 ORTHO05D006104 2.3e-06 56.6 90 43.3
Mapoly0094s0023 Marchantia polymorpha HOM05D004998 ORTHO05D006104 6.8e-06 55.1 114 38.6


User provided reference genes

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