Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006934g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.4e-104 383.6 303 100.0
Nitab4.5_0000446g0080 Nicotiana tabacum HOM05D003750 ORTHO05D004337 9.2e-77 291.2 295 86.1
Peaxi162Scf00807g00024 Petunia axillaris HOM05D003750 ORTHO05D004337 3.4e-63 246.1 306 71.9
PGSC0003DMG400007796 Solanum tuberosum HOM05D003750 ORTHO05D004337 6.0e-52 208.8 118 82.2
Solyc12g011010.2 Solanum lycopersicum HOM05D003750 ORTHO05D004337 1.0e-51 208.0 119 82.4
Peaxi162Scf00688g00432 Petunia axillaris HOM05D003750 ORTHO05D004337 8.7e-51 204.9 123 78.0
Nitab4.5_0001675g0060 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.3e-49 201.1 117 80.3
Nitab4.5_0013539g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 4.8e-49 199.1 117 79.5
Nitab4.5_0002027g0180 Nicotiana tabacum HOM05D003750 ORTHO05D004337 6.2e-49 198.7 138 69.6
Nitab4.5_0001402g0030 Nicotiana tabacum HOM05D003750 ORTHO05D004337 8.1e-49 198.4 138 69.6
CAN.G585.54 Capsicum annuum HOM05D003750 ORTHO05D004337 1.1e-48 198.0 117 78.6
Cc05_g09310 Coffea canephora HOM05D003750 ORTHO05D004337 1.1e-48 198.0 137 68.6
PGSC0003DMG400017342 Solanum tuberosum HOM05D003750 ORTHO05D004337 1.4e-48 197.6 117 78.6
Sopen12g006370 Solanum pennellii HOM05D003750 ORTHO05D004337 1.8e-48 197.2 119 79.8
Solyc07g055950.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 2.4e-48 196.8 117 78.6
Sopen07g029310 Solanum pennellii HOM05D003750 ORTHO05D004337 2.4e-48 196.8 117 78.6
CAN.G164.22 Capsicum annuum HOM05D003750 ORTHO05D004337 5.3e-48 195.7 136 69.9
Oeu020066.1 Olea europaea HOM05D003750 ORTHO05D004337 9.0e-48 194.9 144 70.8
vmacro12451 Vaccinium macrocarpon HOM05D003750 ORTHO05D004337 2.2e-46 190.3 141 66.0
Potri.005G200900 Populus trichocarpa HOM05D003750 ORTHO05D004337 6.4e-46 188.7 136 69.1
SGA_v2.0_scaffold70G23672 Striga asiatica HOM05D003750 ORTHO05D004337 1.1e-45 188.0 133 68.4
Sabra05G0152900 Salix brachista HOM05D003750 ORTHO05D004337 1.4e-45 187.6 135 68.9
Potri.002G060800 Populus trichocarpa HOM05D003750 ORTHO05D004337 3.2e-45 186.4 136 68.4
Prupe.3G171000 Prunus persica HOM05D003750 ORTHO05D004337 3.2e-45 186.4 135 68.1
Gorai.012G041900 Gossypium raimondii HOM05D003750 ORTHO05D004337 4.2e-45 186.0 136 67.6
Rhsim06G0118400 Rhododendron simsii HOM05D003750 ORTHO05D004337 7.1e-45 185.3 167 61.7
Gohir.D04G037100 Gossypium hirsutum HOM05D003750 ORTHO05D004337 9.3e-45 184.9 136 66.9
Haze_13489 Corylus avellana HOM05D003750 ORTHO05D004337 1.6e-44 184.1 121 71.1
Migut.M00516 Erythranthe guttata HOM05D003750 ORTHO05D004337 1.6e-44 184.1 119 72.3
Sopen10g003700 Solanum pennellii HOM05D003750 ORTHO05D004337 1.6e-44 184.1 138 65.2
Gohir.A05G378400 Gossypium hirsutum HOM05D003750 ORTHO05D004337 2.7e-44 183.3 136 66.9
Solyc10g007800.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 2.7e-44 183.3 138 65.2
Cfa022914 Carpinus fangiana HOM05D003750 ORTHO05D004337 3.5e-44 183.0 127 68.5
CiPaw.03G189300 Carya illinoinensis HOM05D003750 ORTHO05D004337 3.5e-44 183.0 145 64.1
CANSAT64G2056 Cannabis sativa HOM05D003750 ORTHO05D004337 7.9e-44 181.8 122 68.9
TAR626G1101 Trochodendron aralioides HOM05D003750 ORTHO05D004337 1.0e-43 181.4 150 62.7
Actinidia11198 Actinidia chinensis HOM05D003750 ORTHO05D004337 1.3e-43 181.0 129 67.4
QL08p043924 Quercus lobata HOM05D003750 ORTHO05D004337 1.8e-43 180.6 119 73.1
PGSC0003DMG400021281 Solanum tuberosum HOM05D003750 ORTHO05D004337 1.8e-43 180.6 117 71.8
FAN05G3098 Fragaria x ananassa HOM05D003750 ORTHO05D004337 2.3e-43 180.3 135 65.2
MD09G1154000 Malus domestica HOM05D003750 ORTHO05D004337 2.3e-43 180.3 121 71.1
MD17G1140600 Malus domestica HOM05D003750 ORTHO05D004337 3.9e-43 179.5 137 64.2
Peaxi162Scf00035g00302 Petunia axillaris HOM05D003750 ORTHO05D004337 5.1e-43 179.1 111 78.4
CSS0030446 Camellia sinensis var. sinensis HOM05D003750 ORTHO05D004337 6.7e-43 178.7 129 66.7
ClCG09G022350 Citrullus lanatus HOM05D003750 ORTHO05D004337 8.7e-43 178.3 133 65.4
RcHm_v2.0_Chr2g0151161 Rosa chinensis HOM05D003750 ORTHO05D004337 8.7e-43 178.3 121 69.4
Sabra02G0049300 Salix brachista HOM05D003750 ORTHO05D004337 8.7e-43 178.3 120 70.0
Duzib187G0136 Durio zibethinus HOM05D003750 ORTHO05D004337 1.1e-42 177.9 118 71.2
FAN02G2641 Fragaria x ananassa HOM05D003750 ORTHO05D004337 1.1e-42 177.9 121 69.4
TWI59G1023 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 1.1e-42 177.9 130 67.7
Duzib264G0293 Durio zibethinus HOM05D003750 ORTHO05D004337 1.5e-42 177.6 113 73.5
Ciclev10032169m.g Citrus clementina HOM05D003750 ORTHO05D004337 1.9e-42 177.2 136 66.9
Manes.01G128300 Manihot esculenta HOM05D003750 ORTHO05D004337 1.9e-42 177.2 118 72.0
PGR142G2515 Punica granatum HOM05D003750 ORTHO05D004337 1.9e-42 177.2 141 62.4
MSTRG.15053 Avicennia marina HOM05D003750 ORTHO05D004337 5.6e-42 175.6 137 65.7
FvH4_6g38100 Fragaria vesca HOM05D003750 ORTHO05D004337 7.4e-42 175.3 119 68.9
Oeu040027.1 Olea europaea HOM05D003750 ORTHO05D004337 7.4e-42 175.3 113 75.2
TWI14G1010 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 9.6e-42 174.9 127 66.9
CAN.G1191.4 Capsicum annuum HOM05D003750 ORTHO05D004337 2.1e-41 173.7 114 71.9
Eucgr.K01198 Eucalyptus grandis HOM05D003750 ORTHO05D004337 2.1e-41 173.7 120 66.7
arahy.Tifrunner.gnm1.ann1.Y7JGW6 Arachis hypogaea HOM05D003750 ORTHO05D004337 3.7e-41 172.9 136 62.5
Phvul.008G190900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 3.7e-41 172.9 124 66.1
arahy.Tifrunner.gnm1.ann1.UWZ29M Arachis hypogaea HOM05D003750 ORTHO05D004337 4.8e-41 172.6 136 62.5
Duzib147G0801 Durio zibethinus HOM05D003750 ORTHO05D004337 4.8e-41 172.6 113 72.6
Glyma.02G287400 Glycine max HOM05D003750 ORTHO05D004337 4.8e-41 172.6 124 66.1
Cpa.g.sc50.77 Carica papaya HOM05D003750 ORTHO05D004337 6.2e-41 172.2 118 70.3
FAN14G5523 Fragaria x ananassa HOM05D003750 ORTHO05D004337 6.2e-41 172.2 119 68.1
Phvul.006G033900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 6.2e-41 172.2 137 62.0
VMungo0647G1422 Vigna mungo HOM05D003750 ORTHO05D004337 8.1e-41 171.8 119 67.2
Lsat_1_v5_gn_3_35901 Lactuca sativa HOM05D003750 ORTHO05D004337 1.4e-40 171.0 136 61.8
TAR624G1252 Trochodendron aralioides HOM05D002606 ORTHO05D003016 1.4e-40 171.0 145 59.3
MELO3C019689.2 Cucumis melo HOM05D003750 ORTHO05D004337 2.4e-40 170.2 114 70.2
Glyma.14G027551 Glycine max HOM05D003750 ORTHO05D004337 2.4e-40 170.2 118 66.1
THA.LOC104803179 Tarenaya hassleriana HOM05D003750 ORTHO05D004337 2.4e-40 170.2 132 63.6
CsaV3_6G015810 Cucumis sativus L. HOM05D003750 ORTHO05D004337 4.0e-40 169.5 114 70.2
HanXRQChr06g0171371 Helianthus annuus HOM05D003750 ORTHO05D004337 4.0e-40 169.5 137 59.9
VMungo0540G2251 Vigna mungo HOM05D003750 ORTHO05D004337 4.0e-40 169.5 146 60.3
Atru.chr6.1510 Acer truncatum HOM05D003750 ORTHO05D004337 5.3e-40 169.1 117 66.7
BcaNung06740 Brassica carinata HOM05D003750 ORTHO05D004337 5.3e-40 169.1 137 63.5
A05p03190 Brassica napus HOM05D003750 ORTHO05D004337 5.3e-40 169.1 137 63.5
C04p03840 Brassica napus HOM05D003750 ORTHO05D004337 5.3e-40 169.1 137 63.5
BolC4t22020H Brassica oleracea HOM05D003750 ORTHO05D004337 5.3e-40 169.1 137 63.5
BraA05t19309Z Brassica rapa HOM05D003750 ORTHO05D004337 5.3e-40 169.1 137 63.5
Ca_27365_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 6.9e-40 168.7 133 62.4
Thecc.01G160900 Theobroma cacao HOM05D003750 ORTHO05D004337 6.9e-40 168.7 113 69.0
CsaV3_6G038000 Cucumis sativus L. HOM05D003750 ORTHO05D004337 9.0e-40 168.3 113 66.4
BcaB06g29267 Brassica carinata HOM05D003750 ORTHO05D004337 1.2e-39 167.9 137 64.2
Psat2g014640 Pisum sativum HOM05D003750 ORTHO05D004337 1.2e-39 167.9 137 61.3
AT2G42840 Arabidopsis thaliana HOM05D003750 ORTHO05D004337 2.0e-39 167.2 135 63.7
Carub.0004s2528 Capsella rubella HOM05D003750 ORTHO05D004337 2.0e-39 167.2 133 63.9
ClCG02G018380 Citrullus lanatus HOM05D003750 ORTHO05D004337 2.6e-39 166.8 114 66.7
LjContig00310g0001182 Lotus japonicus HOM05D003750 ORTHO05D004337 2.6e-39 166.8 124 63.7
Psat0s4925g0080 Pisum sativum HOM05D003750 ORTHO05D004337 3.4e-39 166.4 151 55.0
Migut.H02092 Erythranthe guttata HOM05D003750 ORTHO05D004337 4.5e-39 166.0 123 62.6
Thhalv10016927m.g Eutrema salsugineum HOM05D003750 ORTHO05D004337 5.8e-39 165.6 153 58.2
Lalb_Chr17g0348311 Lupinus albus HOM05D003750 ORTHO05D004337 5.8e-39 165.6 122 63.1
Medtr3g089570 Medicago truncatula HOM05D003750 ORTHO05D004337 5.8e-39 165.6 113 64.6
MSTRG.6755 Avicennia marina HOM05D003750 ORTHO05D004337 1.3e-38 164.5 115 71.3
Glyma.08G309700 Glycine max HOM05D003750 ORTHO05D004337 1.3e-38 164.5 136 61.0
CARHR137920 Cardamine hirsuta HOM05D003750 ORTHO05D004337 1.7e-38 164.1 132 63.6
Dinv12695 Davidia involucrata HOM05D003750 ORTHO05D004337 1.7e-38 164.1 116 69.8
AL4G41450 Arabidopsis lyrata HOM05D003750 ORTHO05D004337 2.2e-38 163.7 122 68.0
Glyma.18G106400 Glycine max HOM05D003750 ORTHO05D004337 2.2e-38 163.7 113 67.3
Sp4g24960 Schrenkiella parvula HOM05D003750 ORTHO05D004337 2.2e-38 163.7 133 62.4
TPR.G12519 Trifolium pratense HOM05D003750 ORTHO05D004337 2.2e-38 163.7 121 61.2
COL.COLO4_33737 Corchorus olitorius HOM05D003750 ORTHO05D004337 2.9e-38 163.3 138 59.4
Lj6g0002200 Lotus japonicus HOM05D003750 ORTHO05D004337 2.9e-38 163.3 111 65.8
SalBow7G0202 Salvia bowleyana HOM05D003750 ORTHO05D004337 4.9e-38 162.5 128 62.5
SalBow7G1469 Salvia bowleyana HOM05D003750 ORTHO05D004337 4.9e-38 162.5 109 70.6
Sed0024619 Sechium edule HOM05D003750 ORTHO05D004337 6.4e-38 162.2 133 58.6
BcaC02g07218 Brassica carinata HOM05D003750 ORTHO05D004337 8.4e-38 161.8 120 67.5
A04p32410 Brassica napus HOM05D003750 ORTHO05D004337 8.4e-38 161.8 120 67.5
C04p69930 Brassica napus HOM05D003750 ORTHO05D004337 8.4e-38 161.8 120 67.5
BolC4t28493H Brassica oleracea HOM05D003750 ORTHO05D004337 8.4e-38 161.8 120 67.5
BraA04t18694Z Brassica rapa HOM05D003750 ORTHO05D004337 8.4e-38 161.8 120 67.5
Lalb_Chr04g0248731 Lupinus albus HOM05D003750 ORTHO05D004337 8.4e-38 161.8 118 61.9
Aa31LG1G24600 Aethionema arabicum HOM05D003750 ORTHO05D004337 1.4e-37 161.0 120 66.7
Lalb_Chr20g0108881 Lupinus albus HOM05D003750 ORTHO05D004337 3.2e-37 159.8 121 62.8
MELO3C014462.2 Cucumis melo HOM05D003750 ORTHO05D004337 7.1e-37 158.7 124 62.1
unitig_899.g15337 Utricularia gibba HOM05D003750 ORTHO05D004337 9.3e-37 158.3 128 59.4
Sed0014259 Sechium edule HOM05D003750 ORTHO05D004337 3.5e-36 156.4 115 65.2
Lalb_Chr10g0106741 Lupinus albus HOM05D003750 ORTHO05D004337 4.6e-36 156.0 117 59.8
Lalb_Chr19g0137861 Lupinus albus HOM05D003750 ORTHO05D004337 6.0e-36 155.6 113 65.5
Sed0013297 Sechium edule HOM05D003750 ORTHO05D004337 6.0e-36 155.6 114 63.2
TPR.G16759 Trifolium pratense HOM05D003750 ORTHO05D004337 6.0e-36 155.6 107 67.3
unitig_46.g18277 Utricularia gibba HOM05D003750 ORTHO05D004337 6.0e-36 155.6 116 59.5
MBI07_g30204_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 7.9e-36 155.2 134 58.2
DCAR_009794 Daucus carota HOM05D003750 ORTHO05D004337 1.3e-35 154.5 133 59.4
unitig_62.g23108 Utricularia gibba HOM05D003750 ORTHO05D004337 1.3e-35 154.5 116 56.9
ECA246G0286 Erigeron canadensis HOM05D003750 ORTHO05D004337 1.8e-35 154.1 135 54.8
unitig_747.g21612 Utricularia gibba HOM05D003750 ORTHO05D004337 6.7e-35 152.1 125 56.0
DCAR_021309 Daucus carota HOM05D003750 ORTHO05D004337 1.1e-34 151.4 127 61.4
Nn6g34390 Nelumbo nucifera HOM05D003750 ORTHO05D004337 1.1e-34 151.4 144 54.2
unitig_37.g12854 Utricularia gibba HOM05D003750 ORTHO05D004337 3.3e-34 149.8 109 60.6
arahy.Tifrunner.gnm1.ann1.N94NTJ Arachis hypogaea HOM05D003750 ORTHO05D004337 4.3e-34 149.4 107 63.6
arahy.Tifrunner.gnm1.ann1.ZP8MLZ Arachis hypogaea HOM05D003750 ORTHO05D004337 7.4e-34 148.7 119 58.8
PSO675G0845 Papaver somniferum HOM05D003750 ORTHO05D004337 7.4e-34 148.7 130 60.0
PSO541G0678 Papaver somniferum HOM05D003750 ORTHO05D004337 9.6e-34 148.3 130 60.0
Nn3g20965 Nelumbo nucifera HOM05D003750 ORTHO05D004337 1.3e-33 147.9 136 56.6
MBI06_g20684_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 4.8e-33 146.0 135 55.6
Sc15g0002430 Simmondsia chinensis HOM05D003750 ORTHO05D004337 4.8e-33 146.0 120 57.5
Lsat_1_v5_gn_4_26620 Lactuca sativa HOM05D003750 ORTHO05D004337 6.2e-33 145.6 125 57.6
DCAR_016898 Daucus carota HOM05D003750 ORTHO05D004337 2.4e-32 143.7 132 56.8
ATR0737G120 Amborella trichopoda HOM05D003750 ORTHO05D004337 3.1e-32 143.3 114 61.4
Os01g0726700 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 6.9e-32 142.1 129 53.5
Aqoxy4G00176 Aquilegia oxysepala HOM05D003750 ORTHO05D004337 1.2e-31 141.4 120 60.0
Hund08216 Selenicereus undatus HOM05D003750 ORTHO05D004337 4.5e-31 139.4 122 52.5
AUR62015148 Chenopodium quinoa HOM05D003750 ORTHO05D004337 1.3e-30 137.9 109 58.7
CDE09G1130 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 2.2e-30 137.1 130 53.1
Ah.01g001950 Amaranthus hybridus HOM05D003750 ORTHO05D004337 3.5e-28 129.8 111 52.3
EL10Ac9g22858 Beta vulgaris HOM05D003750 ORTHO05D004337 4.6e-28 129.4 107 55.1
HanXRQChr17g0565411 Helianthus annuus HOM05D003750 ORTHO05D004337 4.6e-28 129.4 115 56.5
HanXRQChr17g0565481 Helianthus annuus HOM05D003750 ORTHO05D004337 4.6e-28 129.4 113 57.5
HanXRQChr17g0565191 Helianthus annuus HOM05D003750 ORTHO05D004337 6.0e-28 129.0 115 56.5
HanXRQChr17g0565441 Helianthus annuus HOM05D003750 ORTHO05D004337 6.0e-28 129.0 115 56.5
HanXRQChr17g0565471 Helianthus annuus HOM05D003750 ORTHO05D004337 6.0e-28 129.0 115 56.5
Ah.01g013400 Amaranthus hybridus HOM05D003750 ORTHO05D004337 1.0e-27 128.3 108 52.8
unitig_85.g27387 Utricularia gibba HOM05D003750 ORTHO05D004337 1.0e-27 128.3 116 51.7
CDE02G2915 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 1.3e-27 127.9 113 54.0
HanXRQChr01g0028591 Helianthus annuus HOM05D003750 ORTHO05D004337 1.3e-27 127.9 135 53.3
Ca_06287_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 2.3e-27 127.1 96 64.6
Eucgr.A01963 Eucalyptus grandis HOM05D003750 ORTHO05D004337 3.0e-27 126.7 137 55.5
HPP92_009096 Vanilla planifolia HOM05D003750 ORTHO05D004337 1.5e-26 124.4 110 53.6
Zm00001eb154370 Zea mays HOM05D003750 ORTHO05D004337 7.4e-26 122.1 116 52.6
Glyma.02G280550 Glycine max HOM05D003750 ORTHO05D004337 1.6e-25 120.9 111 56.8
AUR62017604 Chenopodium quinoa HOM05D003750 ORTHO05D004337 1.7e-22 110.9 90 53.3
ECA234G0795 Erigeron canadensis HOM05D001021 ORTHO05D000894 3.2e-21 106.7 109 49.5
Zm00001eb239390 Zea mays HOM05D003750 ORTHO05D004337 7.2e-21 105.5 106 47.2
SEGI_25228 Sequoiadendron giganteum HOM05D003750 ORTHO05D004337 7.4e-18 95.5 109 45.9
Zm00001eb120700 Zea mays HOM05D003750 ORTHO05D004337 6.3e-17 92.4 133 43.6
Zm00001eb384740 Zea mays HOM05D003750 ORTHO05D004337 2.0e-15 87.4 105 43.8
Zm00001eb278420 Zea mays HOM05D003750 ORTHO05D004337 5.9e-15 85.9 132 39.4
Zm00001eb277660 Zea mays HOM05D003750 ORTHO05D004337 1.0e-14 85.1 108 43.5
Pp3c4_16960 Physcomitrium patens HOM05D003750 ORTHO05D004337 1.3e-14 84.7 129 39.5
Os06g0553200 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 2.7e-12 77.0 108 39.8
Os02g0230300 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 5.1e-11 72.8 67 53.7
TPR.G40574 Trifolium pratense HOM05D003750 ORTHO05D004337 5.1e-11 72.8 40 65.0
AagrBONN_evm.TU.Sc2ySwM_228.4867 Anthoceros agrestis HOM05D003750 ORTHO05D004337 9.7e-10 68.6 108 35.2
SEGI_36288 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 3.7e-09 66.6 110 35.5
Hma1.2p1_0073F.1_g038610 Hydrangea macrophylla HOM05D003750 ORTHO05D004337 3.1e-08 63.5 29 72.4
Pp3c11_23110 Physcomitrium patens HOM05D003750 ORTHO05D004337 7.0e-08 62.4 114 32.5
Mapoly0037s0134 Marchantia polymorpha HOM05D007363 ORTHO05D009018 3.8e-06 56.6 86 40.7
SEGI_29869 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 3.8e-06 56.6 87 35.6


User provided reference genes

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