Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006903g0010 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.4e-78 296.2 144 100.0
CAN.G919.41 Capsicum annuum HOM05D005659 ORTHO05D007059 3.3e-64 248.4 140 85.7
Peaxi162Scf00091g00713 Petunia axillaris HOM05D005659 ORTHO05D007059 7.2e-64 247.3 141 83.0
Solyc06g074200.4 Solanum lycopersicum HOM05D005659 ORTHO05D007059 9.5e-64 246.9 141 82.3
Sopen06g030620 Solanum pennellii HOM05D005659 ORTHO05D007059 9.5e-64 246.9 141 82.3
PGSC0003DMG400005890 Solanum tuberosum HOM05D005659 ORTHO05D007059 3.6e-63 245.0 141 81.6
SalBow6G0820 Salvia bowleyana HOM05D005659 ORTHO05D007059 6.1e-63 244.2 143 81.1
Oeu002356.1 Olea europaea HOM05D005659 ORTHO05D007059 8.0e-63 243.8 150 78.7
MSTRG.18774 Avicennia marina HOM05D005659 ORTHO05D007059 1.8e-62 242.7 140 81.4
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla HOM05D005659 ORTHO05D007059 8.9e-62 240.4 151 78.8
Ciclev10029515m.g Citrus clementina HOM05D005659 ORTHO05D007059 2.0e-61 239.2 142 80.3
Cc01_g08780 Coffea canephora HOM05D005659 ORTHO05D007059 2.6e-61 238.8 149 79.2
CSS0022105 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 4.4e-61 238.0 151 80.1
Cpa.g.sc195.32 Carica papaya HOM05D005659 ORTHO05D007059 7.5e-61 237.3 150 77.3
CANSAT54G0546 Cannabis sativa HOM05D005659 ORTHO05D007059 6.3e-60 234.2 146 77.4
Aa31sc785G10 Aethionema arabicum HOM05D005659 ORTHO05D007059 8.3e-60 233.8 144 75.7
BolC8t52533H Brassica oleracea HOM05D005659 ORTHO05D007059 1.4e-59 233.0 143 74.8
Sp1g07030 Schrenkiella parvula HOM05D005659 ORTHO05D007059 1.4e-59 233.0 143 76.9
Atru.chr3.3161 Acer truncatum HOM05D005659 ORTHO05D007059 2.4e-59 232.3 144 75.7
Cfa009983 Carpinus fangiana HOM05D005659 ORTHO05D007059 2.4e-59 232.3 150 74.7
Sabra09G0125800 Salix brachista HOM05D005659 ORTHO05D007059 2.4e-59 232.3 150 75.3
A09p65930 Brassica napus HOM05D005659 ORTHO05D007059 3.1e-59 231.9 143 74.8
BraA09t41937Z Brassica rapa HOM05D005659 ORTHO05D007059 3.1e-59 231.9 143 74.8
DCAR_012226 Daucus carota HOM05D005659 ORTHO05D007059 3.1e-59 231.9 146 76.7
Sabra04G0134500 Salix brachista HOM05D005659 ORTHO05D007059 4.1e-59 231.5 149 75.8
TWI75G1160 Tripterygium wilfordii HOM05D005659 ORTHO05D007059 7.0e-59 230.7 151 76.2
Haze_23342 Corylus avellana HOM05D005659 ORTHO05D007059 1.6e-58 229.6 150 75.3
BcaB07g34086 Brassica carinata HOM05D005659 ORTHO05D007059 2.0e-58 229.2 143 75.5
BcaC07g41946 Brassica carinata HOM05D005659 ORTHO05D007059 2.0e-58 229.2 143 74.1
C05p06520 Brassica napus HOM05D005659 ORTHO05D007059 2.0e-58 229.2 143 75.5
C08p50030 Brassica napus HOM05D005659 ORTHO05D007059 2.0e-58 229.2 143 74.1
BolC5t29412H Brassica oleracea HOM05D005659 ORTHO05D007059 2.0e-58 229.2 143 75.5
Thecc.09G277800 Theobroma cacao HOM05D005659 ORTHO05D007059 2.0e-58 229.2 146 76.7
BcaC07g42532 Brassica carinata HOM05D005659 ORTHO05D007059 2.7e-58 228.8 143 74.1
HanXRQChr04g0128561 Helianthus annuus HOM05D005659 ORTHO05D007059 2.7e-58 228.8 140 77.1
GSVIVG01036077001 Vitis vinifera HOM05D005659 ORTHO05D007059 2.7e-58 228.8 149 76.5
Gohir.D05G082100 Gossypium hirsutum HOM05D005659 ORTHO05D007059 4.5e-58 228.0 146 76.0
Potri.009G160800 Populus trichocarpa HOM05D005659 ORTHO05D007059 4.5e-58 228.0 150 74.0
Manes.04G000900 Manihot esculenta HOM05D005659 ORTHO05D007059 7.8e-58 227.3 145 76.6
Sc12g0004680 Simmondsia chinensis HOM05D005659 ORTHO05D007059 7.8e-58 227.3 148 75.0
BcaB03g13338 Brassica carinata HOM05D005659 ORTHO05D007059 1.3e-57 226.5 143 73.4
Potri.004G199400 Populus trichocarpa HOM05D005659 ORTHO05D007059 1.3e-57 226.5 149 73.8
Gorai.009G083700 Gossypium raimondii HOM05D005659 ORTHO05D007059 1.7e-57 226.1 146 75.3
CSS0045008 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 2.3e-57 225.7 145 78.6
Gohir.A05G079200 Gossypium hirsutum HOM05D005659 ORTHO05D007059 2.9e-57 225.3 146 74.7
Prupe.6G137400 Prunus persica HOM05D005659 ORTHO05D007059 2.9e-57 225.3 145 77.2
ECA236G2734 Erigeron canadensis HOM05D005659 ORTHO05D007059 3.8e-57 224.9 141 78.0
Carub.0001s0773 Capsella rubella HOM05D005659 ORTHO05D007059 5.0e-57 224.6 144 74.3
CARHR008270 Cardamine hirsuta HOM05D005659 ORTHO05D007059 5.0e-57 224.6 143 74.1
PGR102G0055 Punica granatum HOM05D005659 ORTHO05D007059 5.0e-57 224.6 145 75.9
EL10Ac4g08175 Beta vulgaris HOM05D005659 ORTHO05D007059 8.6e-57 223.8 146 77.4
AT1G08380 Arabidopsis thaliana HOM05D005659 ORTHO05D007059 1.1e-56 223.4 144 73.6
SGA_v2.0_scaffold7G03995 Striga asiatica HOM05D005659 ORTHO05D007059 1.1e-56 223.4 144 74.3
A06p05400 Brassica napus HOM05D005659 ORTHO05D007059 1.5e-56 223.0 143 74.8
BraA06t23749Z Brassica rapa HOM05D005659 ORTHO05D007059 1.5e-56 223.0 143 74.8
Eucgr.B03824 Eucalyptus grandis HOM05D005659 ORTHO05D007059 3.3e-56 221.9 144 72.9
CiPaw.14G097600 Carya illinoinensis HOM05D005659 ORTHO05D007059 4.3e-56 221.5 151 72.8
Gohir.D07G115000 Gossypium hirsutum HOM05D005659 ORTHO05D007059 7.3e-56 220.7 146 74.0
THA.LOC104826438 Tarenaya hassleriana HOM05D005659 ORTHO05D007059 9.5e-56 220.3 146 72.6
CsaV3_1G015100 Cucumis sativus L. HOM05D005659 ORTHO05D007059 1.6e-55 219.5 138 75.4
Gorai.001G123200 Gossypium raimondii HOM05D005659 ORTHO05D007059 1.6e-55 219.5 146 74.0
PSO339G3866 Papaver somniferum HOM05D005659 ORTHO05D007059 1.6e-55 219.5 144 71.5
Sed0025059 Sechium edule HOM05D005659 ORTHO05D007059 1.6e-55 219.5 138 75.4
MD03G1150500 Malus domestica HOM05D005659 ORTHO05D007059 2.1e-55 219.2 143 73.4
MD11G1169900 Malus domestica HOM05D005659 ORTHO05D007059 2.1e-55 219.2 143 74.1
Dinv22811 Davidia involucrata HOM05D005659 ORTHO05D007059 3.6e-55 218.4 120 81.7
PSO384G5049 Papaver somniferum HOM05D005659 ORTHO05D007059 3.6e-55 218.4 144 71.5
Aqoxy4G02709 Aquilegia oxysepala HOM05D005659 ORTHO05D007059 1.4e-54 216.5 148 70.3
A08p35240 Brassica napus HOM05D005659 ORTHO05D007059 2.3e-54 215.7 132 74.2
MBI17_g28186_MAGBIO Magnolia biondii HOM05D005659 ORTHO05D007059 4.0e-54 214.9 143 73.4
unitig_0.g1472 Utricularia gibba HOM05D005659 ORTHO05D007059 1.2e-53 213.4 142 73.2
Actinidia37070 Actinidia chinensis HOM05D005659 ORTHO05D007059 1.5e-53 213.0 142 74.6
AL1G18790 Arabidopsis lyrata HOM05D005659 ORTHO05D007059 3.4e-53 211.8 114 82.5
Migut.D02409 Erythranthe guttata HOM05D005659 ORTHO05D007059 3.4e-53 211.8 115 83.5
Actinidia35474 Actinidia chinensis HOM05D005659 ORTHO05D007059 7.5e-53 210.7 142 75.4
RcHm_v2.0_Chr5g0046981 Rosa chinensis HOM05D005659 ORTHO05D007059 7.5e-53 210.7 146 71.9
FAN21G2850 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.7e-52 209.5 146 72.6
MELO3C025587.2 Cucumis melo HOM05D005659 ORTHO05D007059 2.2e-52 209.1 115 79.1
FAN11G1786 Fragaria x ananassa HOM05D005659 ORTHO05D007059 3.7e-52 208.4 146 72.6
FAN25G1572 Fragaria x ananassa HOM05D005659 ORTHO05D007059 4.9e-52 208.0 146 71.9
FAN16G1033 Fragaria x ananassa HOM05D005659 ORTHO05D007059 6.4e-52 207.6 146 71.9
Glyma.12G092000 Glycine max HOM05D005659 ORTHO05D007059 8.3e-52 207.2 139 72.7
Psat7g186640 Pisum sativum HOM05D005659 ORTHO05D007059 1.1e-51 206.8 143 71.3
Ca_26075_v3 Cicer arietinum L. HOM05D005659 ORTHO05D007059 2.4e-51 205.7 144 70.1
Lsat_1_v5_gn_7_85921 Lactuca sativa HOM05D005659 ORTHO05D007059 2.4e-51 205.7 143 71.3
Phvul.011G096400 Phaseolus vulgaris HOM05D005659 ORTHO05D007059 2.4e-51 205.7 138 71.7
CDE08G1285 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 3.2e-51 205.3 143 67.8
FvH4_3g25770 Fragaria vesca HOM05D005659 ORTHO05D007059 3.2e-51 205.3 146 71.9
vmacro14338 Vaccinium macrocarpon HOM05D005659 ORTHO05D007059 4.1e-51 204.9 146 69.9
Lalb_Chr03g0028281 Lupinus albus HOM05D005659 ORTHO05D007059 5.4e-51 204.5 143 72.7
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea HOM05D005659 ORTHO05D007059 7.0e-51 204.1 141 71.6
EL10Ac4g08170 Beta vulgaris HOM05D005659 ORTHO05D007059 9.2e-51 203.8 116 81.9
BraA08t35432Z Brassica rapa HOM05D005659 ORTHO05D007059 1.2e-50 203.4 132 72.0
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea HOM05D005659 ORTHO05D007059 6.0e-50 201.1 141 70.2
Medtr4g052420 Medicago truncatula HOM05D005659 ORTHO05D007059 6.0e-50 201.1 140 70.0
TPR.G17220 Trifolium pratense HOM05D005659 ORTHO05D007059 6.0e-50 201.1 145 70.3
CDE02G1582 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 7.8e-50 200.7 143 65.0
VMungo1127G0741 Vigna mungo HOM05D005659 ORTHO05D007059 7.8e-50 200.7 138 69.6
Lj3g0027363 Lotus japonicus HOM05D005659 ORTHO05D007059 1.0e-49 200.3 143 68.5
ATR0579G079 Amborella trichopoda HOM05D005659 ORTHO05D007059 1.3e-49 199.9 146 68.5
Duzib170G0332 Durio zibethinus HOM05D005659 ORTHO05D007059 3.0e-49 198.7 147 67.3
Glyma.11G181100 Glycine max HOM05D005659 ORTHO05D007059 3.9e-49 198.4 141 68.8
HPP92_009876 Vanilla planifolia HOM05D005659 ORTHO05D007059 3.1e-46 188.7 145 65.5
C08p03620 Brassica napus HOM05D005659 ORTHO05D007059 4.0e-46 188.3 113 74.3
TAR633G2174 Trochodendron aralioides HOM05D005659 ORTHO05D007059 1.1e-43 180.3 119 76.5
Os04g0414700 Oryza sativa ssp. japonica HOM05D005659 ORTHO05D007059 4.1e-43 178.3 139 64.0
SEGI_08129 Sequoiadendron giganteum HOM05D005659 ORTHO05D007059 4.6e-42 174.9 136 62.5
Nitab4.5_0000937g0110 Nicotiana tabacum HOM05D005659 ORTHO05D007059 6.0e-42 174.5 84 90.5
Mapoly0064s0077 Marchantia polymorpha HOM05D005659 ORTHO05D007059 8.6e-41 170.6 144 57.6
Pp3c15_16690 Physcomitrium patens HOM05D005659 ORTHO05D007059 1.1e-40 170.2 148 58.8
QL01p011787 Quercus lobata HOM05D005659 ORTHO05D007059 1.1e-40 170.2 115 76.5
Nn2g14238 Nelumbo nucifera HOM05D005659 ORTHO05D007059 1.5e-40 169.9 120 70.8
Zm00001eb083680 Zea mays HOM05D005659 ORTHO05D007059 3.3e-40 168.7 96 78.1
Nitab4.5_0005472g0080 Nicotiana tabacum HOM05D005659 ORTHO05D007059 2.1e-39 166.0 113 75.2
Pp3c15_16700 Physcomitrium patens HOM05D005659 ORTHO05D007059 8.1e-39 164.1 146 56.2
ClCG01G011760 Citrullus lanatus HOM05D005659 ORTHO05D007059 1.8e-38 162.9 86 81.4
AUR62001528 Chenopodium quinoa HOM05D005659 ORTHO05D007059 1.2e-37 160.2 112 72.3
SMO163G0051 Selaginella moellendorffii HOM05D005659 ORTHO05D007059 1.7e-36 156.4 90 76.7
BcaB03g13340 Brassica carinata HOM05D005659 ORTHO05D007059 9.2e-35 150.6 117 61.5
ATR0772G031 Amborella trichopoda HOM05D005659 ORTHO05D007059 3.9e-33 145.2 117 65.8
Hund18778 Selenicereus undatus HOM05D005659 ORTHO05D007059 4.3e-32 141.7 114 65.8
Rhsim01G0203000 Rhododendron simsii HOM05D005659 ORTHO05D007059 1.6e-31 139.8 112 64.3
TAR623G1200 Trochodendron aralioides HOM05D005659 ORTHO05D007059 8.9e-30 134.0 90 76.7
unitig_88.g27645 Utricularia gibba HOM05D005659 ORTHO05D007059 1.4e-27 126.7 89 66.3
Ah.08g223250 Amaranthus hybridus HOM05D005659 ORTHO05D007059 1.9e-27 126.3 113 65.5
Thhalv10009047m.g Eutrema salsugineum HOM05D005659 ORTHO05D007059 2.1e-26 122.9 143 48.3
Nitab4.5_0003068g0060 Nicotiana tabacum HOM05D005659 ORTHO05D007059 3.9e-25 118.6 81 79.0
Peaxi162Scf00345g01024 Petunia axillaris HOM05D005659 ORTHO05D007059 4.3e-24 115.2 158 47.5
Manes.11G164551 Manihot esculenta HOM05D005659 ORTHO05D007059 1.8e-22 109.8 89 60.7
Cre07.g334550 Chlamydomonas reinhardtii HOM05D005659 ORTHO05D007059 1.3e-20 103.6 114 43.0
MCO01G581 Micromonas commoda HOM05D005659 ORTHO05D007059 4.6e-18 95.1 111 42.3
Gohir.A07G111250 Gossypium hirsutum HOM05D005659 ORTHO05D007059 2.4e-14 82.8 69 63.8
MD11G1234000 Malus domestica HOM05D005659 ORTHO05D007059 3.4e-13 79.0 73 61.6
MD17G1209900 Malus domestica HOM05D005659 ORTHO05D007059 1.7e-12 76.6 73 61.6


User provided reference genes

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