Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006902g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 9.0e-43 176.4 83 100.0
Nitab4.5_0001488g0170 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.2e-32 140.2 100 70.0
Nitab4.5_0001031g0050 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.2e-31 139.4 95 72.6
Nitab4.5_0000092g0150 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.4e-29 131.0 87 74.7
Nitab4.5_0000127g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.3e-28 129.4 101 66.3
Nitab4.5_0000082g0390 Nicotiana tabacum HOM05D000045 ORTHO05D002701 5.9e-26 120.6 136 48.5
Nitab4.5_0000843g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.2e-24 114.8 129 51.2
Nitab4.5_0000025g0250 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.0e-23 110.2 85 68.2
Nitab4.5_0011951g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.0e-23 110.2 56 87.5
Nitab4.5_0000095g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.3e-22 108.6 51 96.1
Nitab4.5_0001781g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.3e-22 108.6 53 90.6
Nitab4.5_0008386g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.6e-21 105.1 51 92.2
Nitab4.5_0000707g0210 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.7e-21 104.0 54 87.0
Nitab4.5_0002782g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.8e-20 100.9 54 79.6
Nitab4.5_0003463g0100 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.2e-20 100.1 51 88.2
Nitab4.5_0002145g0080 Nicotiana tabacum HOM05D004033 ORTHO05D002701 9.1e-19 96.7 51 86.3
Nitab4.5_0000188g0290 Nicotiana tabacum HOM05D000045 ORTHO05D002701 2.7e-18 95.1 67 68.7
Nitab4.5_0004465g0090 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.7e-18 93.6 50 86.0
Nitab4.5_0003881g0030 Nicotiana tabacum HOM05D000045 ORTHO05D002701 6.5e-17 90.5 126 40.5
Nitab4.5_0001861g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.5e-16 89.4 48 85.4
Nitab4.5_0001727g0180 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.7e-15 85.1 50 68.0
Nitab4.5_0001246g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.6e-15 84.7 48 70.8
Nitab4.5_0003657g0010 Nicotiana tabacum HOM05D000045 ORTHO05D002701 4.7e-15 84.3 50 68.0
Nitab4.5_0002211g0170 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.1e-15 84.0 50 68.0
Nitab4.5_0006574g0120 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.0e-14 83.2 114 46.5
Nitab4.5_0008760g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.4e-14 82.8 50 66.0
Nitab4.5_0006220g0020 Nicotiana tabacum HOM05D000045 ORTHO05D002701 3.0e-14 81.6 136 33.8
Nitab4.5_0003145g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.0e-14 81.3 43 83.7
Nitab4.5_0000043g0140 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.7e-12 75.9 48 66.7
Nitab4.5_0001919g0150 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.7e-12 75.9 73 52.1
Nitab4.5_0002352g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.2e-12 75.5 49 67.3
Nitab4.5_0005746g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.2e-12 75.5 35 97.1
Nitab4.5_0002714g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.8e-11 72.4 50 66.0
Nitab4.5_0004443g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.1e-11 71.6 35 91.4
Nitab4.5_0002386g0080 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.1e-11 71.2 35 91.4
Nitab4.5_0000691g0160 Nicotiana tabacum HOM05D000045 ORTHO05D002701 5.4e-11 70.9 50 60.0
Nitab4.5_0001432g0080 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.4e-11 70.9 37 81.1
Nitab4.5_0006745g0070 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.6e-10 69.3 85 47.1
Nitab4.5_0012491g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.6e-10 69.3 50 60.0
Nitab4.5_0005287g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.0e-10 68.9 46 60.9
Nitab4.5_0002302g0100 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.5e-10 68.2 50 58.0
Nitab4.5_0000540g0130 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.2e-09 65.5 56 58.9
Nitab4.5_0001310g0120 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.2e-09 65.5 48 66.7
CAN.G160.46 Capsicum annuum HOM05D004033 ORTHO05D002701 5.0e-09 64.3 49 53.1
Nitab4.5_0024535g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.5e-09 63.9 35 82.9
Nitab4.5_0000260g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.9e-08 62.4 126 33.3
Migut.M00234 Erythranthe guttata HOM05D000045 ORTHO05D000067 7.2e-08 60.5 46 52.2
AUR62034374 Chenopodium quinoa HOM05D000045 ORTHO05D000067 1.2e-07 59.7 50 52.0
Atru.chr1.1265 Acer truncatum HOM05D000045 ORTHO05D009940 2.1e-07 58.9 46 54.3
EL10Ac7g17675 Beta vulgaris HOM05D000045 ORTHO05D000067 2.1e-07 58.9 45 46.7
CAN.G739.5 Capsicum annuum HOM05D004033 ORTHO05D002701 2.1e-07 58.9 53 45.3
Os07g0141500 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 4.7e-07 57.8 49 46.9
TPR.G24936 Trifolium pratense HOM05D000045 ORTHO05D000067 4.7e-07 57.8 46 45.7
Rhsim03G0132200 Rhododendron simsii HOM05D000045 ORTHO05D018237 8.0e-07 57.0 47 48.9
Aqoxy6G02203 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.0e-06 56.6 58 43.1
CSS0047537 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.0e-06 56.6 47 48.9
Nitab4.5_0001106g0040 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.0e-06 56.6 65 47.7
Os07g0496300 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 1.0e-06 56.6 67 37.3
Migut.A01062 Erythranthe guttata HOM05D000045 ORTHO05D000067 1.4e-06 56.2 54 44.4
PGR044G2471 Punica granatum HOM05D000045 ORTHO05D000067 1.4e-06 56.2 45 55.6
Rhsim02G0117800 Rhododendron simsii HOM05D000045 ORTHO05D009940 1.4e-06 56.2 47 48.9
AUR62040587 Chenopodium quinoa HOM05D000045 ORTHO05D000067 1.8e-06 55.8 52 46.2
COL.COLO4_37939 Corchorus olitorius HOM05D000045 ORTHO05D009940 1.8e-06 55.8 46 45.7
Nitab4.5_0012426g0030 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.8e-06 55.8 86 41.9
EL10Ac3g05736 Beta vulgaris HOM05D000045 ORTHO05D000067 2.3e-06 55.5 45 44.4
EL10Ac6g15718 Beta vulgaris HOM05D000045 ORTHO05D000067 2.3e-06 55.5 45 44.4
CSS0047126 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.0e-06 55.1 62 46.8
CAN.G908.1 Capsicum annuum HOM05D004033 ORTHO05D002701 3.0e-06 55.1 49 38.8
CSS0014163 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.0e-06 54.7 46 43.5
Nitab4.5_0001969g0100 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.0e-06 54.7 50 50.0
QL03p030360 Quercus lobata HOM05D000045 ORTHO05D000067 5.2e-06 54.3 46 47.8
QL05p086352 Quercus lobata HOM05D000045 ORTHO05D000067 5.2e-06 54.3 46 47.8
Atru.chr12.1768 Acer truncatum HOM05D000045 ORTHO05D009940 6.8e-06 53.9 46 52.2
CSS0031250 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 6.8e-06 53.9 43 48.8
Peaxi162Scf01373g00003 Petunia axillaris HOM05D000045 ORTHO05D002701 6.8e-06 53.9 47 40.4
Peaxi162Scf01954g00002 Petunia axillaris HOM05D000045 ORTHO05D002701 6.8e-06 53.9 47 40.4
Peaxi162Scf03947g00009 Petunia axillaris HOM05D000045 ORTHO05D002701 6.8e-06 53.9 47 40.4
Aqoxy7G02166 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 8.8e-06 53.5 96 33.3
CSS0010009 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 8.8e-06 53.5 43 46.5
CiPaw.01G219800 Carya illinoinensis HOM05D000045 ORTHO05D000067 8.8e-06 53.5 47 46.8
CiPaw.07G027200 Carya illinoinensis HOM05D000045 ORTHO05D000067 8.8e-06 53.5 45 51.1
Manes.09G081652 Manihot esculenta HOM05D000045 ORTHO05D000067 8.8e-06 53.5 54 46.3


User provided reference genes

Program Settings