Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 0.0e+00 1265.0 646 100.0
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 0.0e+00 1079.3 675 84.7
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 3.5e-150 536.2 715 47.4
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 2.7e-142 510.0 398 65.3
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 3.0e-141 506.5 398 65.1
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 7.3e-140 501.9 497 56.3
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 1.0e-133 481.5 757 42.4
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 7.3e-132 475.3 706 45.2
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 1.6e-126 457.6 707 42.0
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 1.3e-123 448.0 684 44.4
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 3.6e-123 446.4 697 43.8
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 3.2e-119 433.3 544 47.6
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 1.8e-117 427.6 583 45.3
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 1.8e-117 427.6 709 41.2
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 8.1e-115 418.7 638 42.2
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 1.1e-114 418.3 571 44.8
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 2.4e-114 417.2 712 40.4
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 5.3e-114 416.0 550 46.7
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 1.5e-113 414.5 696 40.2
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 2.6e-113 413.7 340 62.1
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 1.0e-112 411.8 535 46.5
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 1.7e-112 411.0 606 45.0
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 1.7e-112 411.0 582 44.7
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 3.8e-112 409.8 663 42.7
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 1.9e-111 407.5 455 51.6
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 2.5e-111 407.1 456 50.2
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 7.1e-111 405.6 439 51.7
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 2.7e-110 403.7 549 46.3
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 6.0e-110 402.5 439 51.5
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 6.7e-109 399.1 680 41.9
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 1.1e-108 398.3 405 54.3
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 1.9e-108 397.5 686 40.2
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 5.7e-108 396.0 699 38.8
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 1.3e-107 394.8 622 41.6
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 4.8e-107 392.9 711 38.3
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 1.8e-106 391.0 610 41.6
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 2.4e-106 390.6 439 49.7
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 3.1e-106 390.2 676 39.8
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 3.1e-106 390.2 636 41.2
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 5.3e-106 389.4 645 40.9
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 9.0e-106 388.7 607 42.2
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 1.2e-105 388.3 685 40.4
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 3.4e-105 386.7 538 44.2
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 7.6e-105 385.6 679 40.6
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 7.6e-105 385.6 630 40.5
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 1.3e-104 384.8 635 40.5
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 3.2e-103 380.2 698 38.3
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 5.5e-103 379.4 440 49.8
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 1.2e-102 378.3 678 40.0
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 1.0e-101 375.2 648 39.8
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 5.1e-101 372.9 560 43.0
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 2.8e-99 367.1 375 54.9
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 1.5e-97 361.3 671 39.5
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 5.9e-97 359.4 540 43.9
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 3.8e-96 356.7 596 40.8
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 8.5e-96 355.5 550 42.4
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 2.5e-95 354.0 364 52.7
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 1.6e-94 351.3 372 50.8
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 2.7e-94 350.5 364 52.2
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 2.7e-94 350.5 690 38.0
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 3.6e-94 350.1 542 42.8
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 2.3e-93 347.4 514 41.4
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 3.0e-93 347.1 321 57.0
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 1.3e-91 341.7 683 38.1
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 4.8e-91 339.7 575 40.5
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 1.1e-90 338.6 673 36.3
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 3.1e-90 337.0 673 39.1
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 3.1e-90 337.0 698 36.4
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 6.9e-90 335.9 371 50.4
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 2.6e-89 334.0 583 40.0
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 7.7e-89 332.4 483 44.1
Peaxi162Scf00305g00413 Petunia axillaris HOM05D006714 ORTHO05D008103 3.2e-87 327.0 280 67.9
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 2.1e-86 324.3 687 35.2
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 7.9e-86 322.4 707 35.6
Peaxi162Scf00305g00412 Petunia axillaris HOM05D006714 ORTHO05D008103 7.9e-86 322.4 204 75.5
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 3.3e-84 317.0 687 36.7
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 1.3e-83 315.1 709 35.0
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 4.8e-83 313.2 715 34.7
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 3.1e-82 310.5 706 34.8
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 1.2e-81 308.5 335 51.6
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 2.2e-80 304.3 699 35.2
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 5.5e-79 299.7 406 45.3
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 1.5e-76 291.6 331 51.7
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 4.4e-76 290.0 406 44.3
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 1.3e-75 288.5 565 37.5
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 4.8e-75 286.6 568 38.7
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 2.4e-74 284.3 421 42.0
Atru.chr1.1942 Acer truncatum HOM05D006714 ORTHO05D008103 7.0e-74 282.7 206 65.0
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 2.1e-70 271.2 456 40.4
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 2.3e-69 267.7 370 41.4
unitig_748.g8636 Utricularia gibba HOM05D006714 ORTHO05D008103 3.0e-69 267.3 399 43.4
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 1.2e-68 265.4 469 41.4
PSO063G0106 Papaver somniferum HOM05D006714 ORTHO05D008103 1.6e-65 255.0 253 53.0
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 5.7e-60 236.5 539 36.4
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 4.1e-58 230.3 276 48.2
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 1.2e-57 228.8 356 44.1
Pp3c23_20330 Physcomitrium patens HOM05D006714 ORTHO05D008103 1.2e-52 212.2 286 41.6
Pp3c24_16350 Physcomitrium patens HOM05D006714 ORTHO05D008103 7.5e-52 209.5 354 37.6
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 2.1e-46 191.4 240 45.8
CSS0036373 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 1.8e-45 188.3 255 46.7
SMO340G0205 Selaginella moellendorffii HOM05D006714 ORTHO05D008103 3.1e-45 187.6 182 49.5
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 5.8e-44 183.3 514 33.1
CBR_g12792 Chara braunii HOM05D006714 ORTHO05D008103 7.5e-44 183.0 262 38.2
Eucgr.F02863 Eucalyptus grandis HOM05D006714 ORTHO05D008103 1.3e-43 182.2 101 79.2
QL93p0100_0731 Quercus lobata HOM05D006714 ORTHO05D008103 2.9e-43 181.0 97 80.4
CSS0024067 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 8.3e-43 179.5 252 46.0
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 1.1e-39 169.1 577 29.5
QL93p0100_0723 Quercus lobata HOM05D006714 ORTHO05D008103 1.8e-29 135.2 203 43.8
Oeu032321.1 Olea europaea HOM05D006714 ORTHO05D008103 4.3e-07 60.8 217 30.4
Atru.chr1.1941 Acer truncatum HOM05D006714 ORTHO05D008103 1.6e-06 58.9 113 36.3


User provided reference genes

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