Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006887g0010 Nicotiana tabacum HOM05D007598 ORTHO05D009632 3.9e-73 278.1 146 100.0
Nitab4.5_0000420g0040 Nicotiana tabacum HOM05D007598 ORTHO05D009632 4.5e-29 131.7 74 93.2
Dinv32243 Davidia involucrata HOM05D007598 ORTHO05D009632 5.9e-21 104.8 74 67.6
AUR62002748 Chenopodium quinoa HOM05D007598 ORTHO05D009632 7.7e-21 104.4 74 70.3
CAN.G702.32 Capsicum annuum HOM05D007598 ORTHO05D009632 2.9e-20 102.4 67 77.6
AUR62030196 Chenopodium quinoa HOM05D007598 ORTHO05D009632 3.8e-20 102.1 74 68.9
Cc00_g10360 Coffea canephora HOM05D007598 ORTHO05D009632 3.8e-20 102.1 75 72.0
Actinidia39580 Actinidia chinensis HOM05D007598 ORTHO05D009632 5.0e-20 101.7 81 63.0
Rhsim02G0159000 Rhododendron simsii HOM05D007598 ORTHO05D009632 6.5e-20 101.3 73 72.6
CSS0006536 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 3.2e-19 99.0 73 71.2
MELO3C007128.2 Cucumis melo HOM05D007598 ORTHO05D009632 5.5e-19 98.2 70 67.1
Aqoxy7G00246 Aquilegia oxysepala HOM05D007598 ORTHO05D009632 7.2e-19 97.8 66 68.2
FAN25G0892 Fragaria x ananassa HOM05D007598 ORTHO05D009632 9.4e-19 97.4 59 79.7
PGSC0003DMG400021093 Solanum tuberosum HOM05D007598 ORTHO05D009632 9.4e-19 97.4 72 73.6
arahy.Tifrunner.gnm1.ann1.A3G0A3 Arachis hypogaea HOM05D007598 ORTHO05D009632 1.2e-18 97.1 73 63.0
arahy.Tifrunner.gnm1.ann1.KTXA2U Arachis hypogaea HOM05D007598 ORTHO05D009632 1.6e-18 96.7 73 63.0
CiPaw.10G091200 Carya illinoinensis HOM05D007598 ORTHO05D009632 1.6e-18 96.7 60 76.7
Thecc.06G149600 Theobroma cacao HOM05D007598 ORTHO05D009632 1.6e-18 96.7 74 63.5
CANSAT35G0825 Cannabis sativa HOM05D007598 ORTHO05D009632 2.1e-18 96.3 60 78.3
CsaV3_6G051780 Cucumis sativus L. HOM05D007598 ORTHO05D009632 2.1e-18 96.3 70 65.7
Sopen02g019560 Solanum pennellii HOM05D007598 ORTHO05D009632 2.1e-18 96.3 71 69.0
CSS0035986 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 2.7e-18 95.9 74 68.9
Psat1g188680 Pisum sativum HOM05D007598 ORTHO05D009632 2.7e-18 95.9 59 78.0
Solyc02g070470.1 Solanum lycopersicum HOM05D007598 ORTHO05D009632 2.7e-18 95.9 71 69.0
SalBow8G5536 Salvia bowleyana HOM05D007598 ORTHO05D009632 3.6e-18 95.5 63 76.2
EL10Ac8g19673 Beta vulgaris HOM05D007598 ORTHO05D009632 4.7e-18 95.1 69 71.0
FAN11G3574 Fragaria x ananassa HOM05D007598 ORTHO05D009632 4.7e-18 95.1 59 78.0
PGSC0003DMG400012092 Solanum tuberosum HOM05D007598 ORTHO05D009632 4.7e-18 95.1 54 87.0
FAN16G2639 Fragaria x ananassa HOM05D007598 ORTHO05D009632 8.0e-18 94.4 59 78.0
FAN21G2813 Fragaria x ananassa HOM05D007598 ORTHO05D009632 8.0e-18 94.4 59 78.0
Sed0007826 Sechium edule HOM05D007598 ORTHO05D009632 8.0e-18 94.4 66 71.2
Aa31LG10G6810 Aethionema arabicum HOM05D007598 ORTHO05D009632 1.0e-17 94.0 77 62.3
ClCG01G024670 Citrullus lanatus HOM05D007598 ORTHO05D009632 1.0e-17 94.0 66 68.2
Manes.17G070801 Manihot esculenta HOM05D007598 ORTHO05D009632 1.0e-17 94.0 62 75.8
Actinidia07703 Actinidia chinensis HOM05D007598 ORTHO05D009632 1.4e-17 93.6 82 61.0
DCAR_027909 Daucus carota HOM05D007598 ORTHO05D009632 1.4e-17 93.6 68 69.1
FvH4_3g05470 Fragaria vesca HOM05D007598 ORTHO05D009632 1.4e-17 93.6 82 61.0
Glyma.13G218700 Glycine max HOM05D007598 ORTHO05D009632 1.4e-17 93.6 59 76.3
Medtr2g019240 Medicago truncatula HOM05D007598 ORTHO05D009632 1.8e-17 93.2 61 73.8
THA.LOC104820651 Tarenaya hassleriana HOM05D007598 ORTHO05D009632 1.8e-17 93.2 71 66.2
AL4G30560 Arabidopsis lyrata HOM05D007598 ORTHO05D009632 2.3e-17 92.8 78 62.8
Phvul.006G165400 Phaseolus vulgaris HOM05D007598 ORTHO05D009632 2.3e-17 92.8 60 75.0
Prupe.4G081500 Prunus persica HOM05D007598 ORTHO05D009632 2.3e-17 92.8 62 72.6
Sabra11G0066800 Salix brachista HOM05D007598 ORTHO05D009632 3.0e-17 92.4 59 76.3
Ca_00537_v3 Cicer arietinum L. HOM05D007598 ORTHO05D009632 3.9e-17 92.0 72 66.7
Migut.M01992 Erythranthe guttata HOM05D007598 ORTHO05D009632 3.9e-17 92.0 73 68.5
Lalb_Chr20g0117881 Lupinus albus HOM05D007598 ORTHO05D009632 3.9e-17 92.0 59 72.9
Carub.0004s1626 Capsella rubella HOM05D007598 ORTHO05D009632 5.2e-17 91.7 80 61.2
MBI02_g15148_MAGBIO Magnolia biondii HOM05D007598 ORTHO05D009632 5.2e-17 91.7 60 71.7
MD05G1283100 Malus domestica HOM05D007598 ORTHO05D009632 5.2e-17 91.7 61 72.1
BcaB06g28784 Brassica carinata HOM05D007598 ORTHO05D009632 6.7e-17 91.3 50 84.0
A04p26490 Brassica napus HOM05D007598 ORTHO05D009632 6.7e-17 91.3 50 84.0
C04p63910 Brassica napus HOM05D007598 ORTHO05D009632 6.7e-17 91.3 50 84.0
BolC4t27858H Brassica oleracea HOM05D007598 ORTHO05D009632 6.7e-17 91.3 50 84.0
BraA04t18153Z Brassica rapa HOM05D007598 ORTHO05D009632 6.7e-17 91.3 50 84.0
Cfa000936 Carpinus fangiana HOM05D007598 ORTHO05D009632 6.7e-17 91.3 60 73.3
Thhalv10017600m.g Eutrema salsugineum HOM05D007598 ORTHO05D009632 8.8e-17 90.9 78 65.4
Sp4g16850 Schrenkiella parvula HOM05D007598 ORTHO05D009632 8.8e-17 90.9 50 84.0
Ah.14g086510 Amaranthus hybridus HOM05D007598 ORTHO05D009632 1.1e-16 90.5 101 52.5
Migut.M00903 Erythranthe guttata HOM05D007598 ORTHO05D009632 1.1e-16 90.5 73 67.1
Gohir.D10G042400 Gossypium hirsutum HOM05D007598 ORTHO05D009632 1.1e-16 90.5 60 73.3
Potri.011G084300 Populus trichocarpa HOM05D007598 ORTHO05D009632 1.1e-16 90.5 59 74.6
Glyma.15G093500 Glycine max HOM05D007598 ORTHO05D009632 2.0e-16 89.7 60 71.7
RcHm_v2.0_Chr5g0014281 Rosa chinensis HOM05D007598 ORTHO05D009632 2.0e-16 89.7 60 73.3
AT2G34585 Arabidopsis thaliana HOM05D007598 ORTHO05D009632 2.6e-16 89.4 75 62.7
HanXRQChr15g0480881 Helianthus annuus HOM05D007598 ORTHO05D009632 3.3e-16 89.0 77 66.2
Nn3g20182 Nelumbo nucifera HOM05D007598 ORTHO05D009632 3.3e-16 89.0 62 71.0
HanXRQChr04g0114301 Helianthus annuus HOM05D007598 ORTHO05D009632 4.4e-16 88.6 65 72.3
CARHR128680 Cardamine hirsuta HOM05D007598 ORTHO05D009632 5.7e-16 88.2 73 60.3
Lj6g0001552 Lotus japonicus HOM05D007598 ORTHO05D009632 9.7e-16 87.4 58 74.1
Cpa.g.sc170.27 Carica papaya HOM05D007598 ORTHO05D009632 1.3e-15 87.0 73 64.4
Nitab4.5_0002744g0030 Nicotiana tabacum HOM05D007598 ORTHO05D009632 1.3e-15 87.0 75 62.7
PGR042G1521 Punica granatum HOM05D007598 ORTHO05D009632 1.3e-15 87.0 55 72.7
Lsat_1_v5_gn_7_28481 Lactuca sativa HOM05D007598 ORTHO05D009632 1.7e-15 86.7 74 63.5
TAR626G0451 Trochodendron aralioides HOM05D007598 ORTHO05D009632 1.7e-15 86.7 58 72.4
PSO541G2526 Papaver somniferum HOM05D007598 ORTHO05D009632 2.8e-15 85.9 82 57.3
QL05p057697 Quercus lobata HOM05D007598 ORTHO05D009632 2.8e-15 85.9 78 61.5
Atru.chr10.1775 Acer truncatum HOM05D007598 ORTHO05D009632 3.7e-15 85.5 93 48.4
ATR1098G093 Amborella trichopoda HOM05D007598 ORTHO05D009632 3.7e-15 85.5 73 57.5
Duzib235G0096 Durio zibethinus HOM05D007598 ORTHO05D009632 3.7e-15 85.5 86 54.7
MD10G1261400 Malus domestica HOM05D007598 ORTHO05D009632 3.7e-15 85.5 85 54.1
unitig_749.g13736 Utricularia gibba HOM05D007598 ORTHO05D009632 3.7e-15 85.5 66 66.7
Rhsim13G0114100 Rhododendron simsii HOM05D007598 ORTHO05D009632 8.2e-15 84.3 77 57.1
Ciclev10017916m.g Citrus clementina HOM05D007598 ORTHO05D009632 1.1e-14 84.0 76 60.5
Sc05g0006160 Simmondsia chinensis HOM05D007598 ORTHO05D009632 1.1e-14 84.0 59 64.4
COL.COLO4_31062 Corchorus olitorius HOM05D007598 ORTHO05D009632 4.1e-14 82.0 46 82.6
HPP92_000988 Vanilla planifolia HOM05D007598 ORTHO05D009632 4.1e-14 82.0 47 76.6
ECA236G0778 Erigeron canadensis HOM05D007598 ORTHO05D009632 2.6e-13 79.3 46 76.1
Os07g0154300 Oryza sativa ssp. japonica HOM05D007598 ORTHO05D009632 3.5e-13 79.0 48 77.1
TWI53G0871 Tripterygium wilfordii HOM05D007598 ORTHO05D009632 4.5e-13 78.6 59 64.4
Zm00001eb117510 Zea mays HOM05D007598 ORTHO05D009632 7.7e-13 77.8 73 61.6
SEGI_36626 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 2.2e-12 76.3 49 69.4
Mapoly0055s0099 Marchantia polymorpha HOM05D007598 ORTHO05D009632 2.3e-09 66.2 49 59.2
Actinidia16706 Actinidia chinensis HOM05D000667 ORTHO05D004096 2.0e-08 63.2 57 59.6
Pp3c14_11250 Physcomitrium patens HOM05D007598 ORTHO05D009632 1.3e-07 60.5 79 40.5
SEGI_00564 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 1.8e-06 56.6 52 50.0


User provided reference genes

Program Settings