Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006876g0050 Nicotiana tabacum HOM05D002775 ORTHO05D003262 1.5e-36 155.6 77 100.0
Nitab4.5_0000515g0010 Nicotiana tabacum HOM05D002775 ORTHO05D003262 4.8e-14 80.9 155 38.7
Nitab4.5_0006876g0030 Nicotiana tabacum HOM05D002775 ORTHO05D003262 4.8e-14 80.9 155 38.7
Peaxi162Scf00903g00213 Petunia axillaris HOM05D002775 ORTHO05D003262 3.1e-13 78.2 155 38.1
CAN.G641.55 Capsicum annuum HOM05D002775 ORTHO05D003262 1.5e-12 75.9 155 36.8
Cc06_g18960 Coffea canephora HOM05D002775 ORTHO05D003262 4.5e-12 74.3 155 36.1
Oeu059333.1 Olea europaea HOM05D002775 ORTHO05D003262 1.7e-11 72.4 155 34.8
Rhsim03G0040300 Rhododendron simsii HOM05D002775 ORTHO05D003262 2.9e-11 71.6 155 35.5
SEGI_04308 Sequoiadendron giganteum HOM05D002775 ORTHO05D003262 6.5e-11 70.5 154 35.1
Solyc10g079620.2 Solanum lycopersicum HOM05D002775 ORTHO05D003262 2.5e-10 68.6 70 55.7
Sopen10g030260 Solanum pennellii HOM05D002775 ORTHO05D003262 2.5e-10 68.6 70 55.7
PGSC0003DMG400029856 Solanum tuberosum HOM05D002775 ORTHO05D003262 2.5e-10 68.6 70 55.7
vmacro07805 Vaccinium macrocarpon HOM05D002775 ORTHO05D003262 1.2e-09 66.2 70 52.9
ClCG10G016140 Citrullus lanatus HOM05D002775 ORTHO05D003262 1.6e-09 65.9 70 52.9
MELO3C009765.2 Cucumis melo HOM05D002775 ORTHO05D003262 1.6e-09 65.9 70 54.3
Sed0003461 Sechium edule HOM05D002775 ORTHO05D003262 1.6e-09 65.9 70 54.3
CsaV3_3G040280 Cucumis sativus L. HOM05D002775 ORTHO05D003262 3.6e-09 64.7 70 52.9
Sed0003281 Sechium edule HOM05D002775 ORTHO05D003262 3.6e-09 64.7 70 52.9
HPP92_013974 Vanilla planifolia HOM05D002775 ORTHO05D003262 3.6e-09 64.7 155 32.3
CARHR136340 Cardamine hirsuta HOM05D002775 ORTHO05D003262 4.6e-09 64.3 95 43.2
Eucgr.A02255 Eucalyptus grandis HOM05D002775 ORTHO05D003262 4.6e-09 64.3 70 51.4
Prupe.7G041200 Prunus persica HOM05D002775 ORTHO05D003262 4.6e-09 64.3 70 51.4
CSS0003428 Camellia sinensis var. sinensis HOM05D002775 ORTHO05D003262 6.1e-09 63.9 81 46.9
MD14G1085300 Malus domestica HOM05D002775 ORTHO05D003262 6.1e-09 63.9 70 51.4
BcaC02g12889 Brassica carinata HOM05D002775 ORTHO05D003262 7.9e-09 63.5 70 50.0
A04p31450 Brassica napus HOM05D002775 ORTHO05D003262 7.9e-09 63.5 70 50.0
C04p68860 Brassica napus HOM05D002775 ORTHO05D003262 7.9e-09 63.5 70 50.0
BraA04t18602Z Brassica rapa HOM05D002775 ORTHO05D003262 7.9e-09 63.5 70 50.0
AUR62030347 Chenopodium quinoa HOM05D002775 ORTHO05D003262 7.9e-09 63.5 70 50.0
Thhalv10016879m.g Eutrema salsugineum HOM05D002775 ORTHO05D003262 7.9e-09 63.5 70 50.0
Carub.0004s2357 Capsella rubella HOM05D002775 ORTHO05D003262 1.0e-08 63.2 70 50.0
Hma1.2p1_0553F.1_g177770 Hydrangea macrophylla HOM05D002775 ORTHO05D003262 1.0e-08 63.2 70 51.4
MD12G1093300 Malus domestica HOM05D002775 ORTHO05D003262 1.0e-08 63.2 70 50.0
Oeu008217.1 Olea europaea HOM05D002775 ORTHO05D003262 1.0e-08 63.2 70 50.0
THA.LOC104816223 Tarenaya hassleriana HOM05D002775 ORTHO05D003262 1.0e-08 63.2 69 52.2
THA.LOC104824403 Tarenaya hassleriana HOM05D002775 ORTHO05D003262 1.0e-08 63.2 70 50.0
TWI74G0453 Tripterygium wilfordii HOM05D002775 ORTHO05D003262 1.0e-08 63.2 70 50.0
arahy.Tifrunner.gnm1.ann1.LX9DGM Arachis hypogaea HOM05D002775 ORTHO05D003262 1.4e-08 62.8 70 51.4
BolC4t28390H Brassica oleracea HOM05D002775 ORTHO05D003262 1.4e-08 62.8 70 50.0
Duzib128G1018 Durio zibethinus HOM05D002775 ORTHO05D003262 1.4e-08 62.8 70 48.6
TWI77G0151 Tripterygium wilfordii HOM05D002775 ORTHO05D003262 1.4e-08 62.8 70 50.0
arahy.Tifrunner.gnm1.ann1.S2PB51 Arachis hypogaea HOM05D002775 ORTHO05D003262 1.8e-08 62.4 70 50.0
Thecc.05G137200 Theobroma cacao HOM05D002775 ORTHO05D003262 1.8e-08 62.4 70 48.6
Aa31LG3G760 Aethionema arabicum HOM05D002775 ORTHO05D003262 2.3e-08 62.0 70 47.1
MSTRG.6374 Avicennia marina HOM05D002775 ORTHO05D003262 2.3e-08 62.0 70 50.0
CSS0046294 Camellia sinensis var. sinensis HOM05D002775 ORTHO05D003262 2.3e-08 62.0 70 48.6
Ciclev10005563m.g Citrus clementina HOM05D002775 ORTHO05D003262 2.3e-08 62.0 70 48.6
COL.COLO4_20629 Corchorus olitorius HOM05D002775 ORTHO05D003262 2.3e-08 62.0 70 48.6
Dinv09473 Davidia involucrata HOM05D002775 ORTHO05D003262 2.3e-08 62.0 70 48.6
Dinv15939 Davidia involucrata HOM05D002775 ORTHO05D003262 2.3e-08 62.0 70 48.6
Atru.chr1.1504 Acer truncatum HOM05D002775 ORTHO05D003262 3.0e-08 61.6 70 48.6
CiPaw.09G046700 Carya illinoinensis HOM05D002775 ORTHO05D003262 3.0e-08 61.6 70 48.6
ATR0745G031 Amborella trichopoda HOM05D002775 ORTHO05D003262 3.9e-08 61.2 70 48.6
CSS0003680 Camellia sinensis var. sinensis HOM05D002775 ORTHO05D003262 3.9e-08 61.2 68 50.0
CDE05G0954 Ceratophyllum demersum HOM05D002775 ORTHO05D003262 3.9e-08 61.2 70 51.4
AUR62040835 Chenopodium quinoa HOM05D002775 ORTHO05D003262 3.9e-08 61.2 70 48.6
GSVIVG01033613001 Vitis vinifera HOM05D002775 ORTHO05D003262 3.9e-08 61.2 68 51.5
Aqoxy1G00357 Aquilegia oxysepala HOM05D002775 ORTHO05D003262 5.1e-08 60.8 70 47.1
Cfa020016 Carpinus fangiana HOM05D002775 ORTHO05D003262 5.1e-08 60.8 70 47.1
AL4G39230 Arabidopsis lyrata HOM05D002775 ORTHO05D003262 6.7e-08 60.5 70 48.6
AT2G41250 Arabidopsis thaliana HOM05D002775 ORTHO05D003262 6.7e-08 60.5 70 48.6
Ca_08411_v3 Cicer arietinum L. HOM05D002775 ORTHO05D003262 6.7e-08 60.5 69 49.3
Gohir.D11G323200 Gossypium hirsutum HOM05D002775 ORTHO05D003262 6.7e-08 60.5 70 47.1
Gorai.007G353200 Gossypium raimondii HOM05D002775 ORTHO05D003262 6.7e-08 60.5 70 47.1
QL03p064981 Quercus lobata HOM05D002775 ORTHO05D003262 6.7e-08 60.5 69 49.3
QL04p066053 Quercus lobata HOM05D000176 ORTHO05D000106 6.7e-08 60.5 69 49.3
QL07p009774 Quercus lobata HOM05D002775 ORTHO05D003262 6.7e-08 60.5 69 49.3
QL93p0200_0009 Quercus lobata HOM05D002775 ORTHO05D003262 6.7e-08 60.5 69 49.3
QL93p2009_0008 Quercus lobata HOM05D002775 ORTHO05D003262 6.7e-08 60.5 69 49.3
RcHm_v2.0_Chr2g0125431 Rosa chinensis HOM05D002775 ORTHO05D003262 6.7e-08 60.5 70 47.1
Sp4g23570 Schrenkiella parvula HOM05D002775 ORTHO05D003262 6.7e-08 60.5 69 49.3
TAR636G1121 Trochodendron aralioides HOM05D002775 ORTHO05D003262 6.7e-08 60.5 70 48.6
Manes.09G006500 Manihot esculenta HOM05D002775 ORTHO05D003262 8.8e-08 60.1 69 49.3
SGA_v2.0_scaffold105G30299 Striga asiatica HOM05D000302 ORTHO05D000334 8.8e-08 60.1 70 48.6
Zm00001eb329780 Zea mays HOM05D002775 ORTHO05D003262 8.8e-08 60.1 70 50.0
CANSAT64G2189 Cannabis sativa HOM05D002775 ORTHO05D003262 1.1e-07 59.7 70 47.1
CiPaw.10G039500 Carya illinoinensis HOM05D002775 ORTHO05D003262 1.1e-07 59.7 70 47.1
Dinv34372 Davidia involucrata HOM05D002775 ORTHO05D003262 1.1e-07 59.7 70 48.6
Gohir.A11G307800 Gossypium hirsutum HOM05D002775 ORTHO05D003262 1.1e-07 59.7 70 47.1
Lj1g0020632 Lotus japonicus HOM05D002775 ORTHO05D003262 1.1e-07 59.7 69 49.3
Medtr7g090370 Medicago truncatula HOM05D002775 ORTHO05D003262 1.1e-07 59.7 69 49.3
CSS0019588 Camellia sinensis var. sinensis HOM05D002775 ORTHO05D003262 1.5e-07 59.3 70 48.6
FvH4_6g25490 Fragaria vesca HOM05D002775 ORTHO05D003262 1.5e-07 59.3 69 47.8
Lj1A1096T60 Lonicera japonica HOM05D002775 ORTHO05D003262 1.5e-07 59.3 70 47.1
Lj1A1098T77 Lonicera japonica HOM05D002775 ORTHO05D003262 1.5e-07 59.3 70 47.1
Manes.08G058400 Manihot esculenta HOM05D002775 ORTHO05D003262 1.5e-07 59.3 70 48.6
PGR031G2172 Punica granatum HOM05D002775 ORTHO05D003262 1.5e-07 59.3 70 47.1
SMO232G0103 Selaginella moellendorffii HOM05D002775 ORTHO05D003262 1.5e-07 59.3 69 47.8
TPR.G32736 Trifolium pratense HOM05D002775 ORTHO05D003262 1.5e-07 59.3 69 49.3
Lalb_Chr25g0286931 Lupinus albus HOM05D002775 ORTHO05D003262 2.0e-07 58.9 69 49.3
SalBow6G1070 Salvia bowleyana HOM05D002775 ORTHO05D003262 2.0e-07 58.9 70 48.6
Zm00001eb110760 Zea mays HOM05D002775 ORTHO05D003262 2.0e-07 58.9 68 50.0
DCAR_020560 Daucus carota HOM05D002775 ORTHO05D003262 2.6e-07 58.5 70 47.1
Lsat_1_v5_gn_9_29601 Lactuca sativa HOM05D002775 ORTHO05D003262 2.6e-07 58.5 70 48.6
Hund24623 Selenicereus undatus HOM05D002775 ORTHO05D003262 2.6e-07 58.5 70 47.1
Sc19g0008240 Simmondsia chinensis HOM05D002775 ORTHO05D003262 2.6e-07 58.5 70 45.7
Migut.J01666 Erythranthe guttata HOM05D002775 ORTHO05D003262 3.3e-07 58.2 68 48.5
Lalb_Chr20g0110181 Lupinus albus HOM05D002775 ORTHO05D003262 3.3e-07 58.2 69 47.8
PSO384G3781 Papaver somniferum HOM05D002775 ORTHO05D003262 3.3e-07 58.2 70 48.6
Hund19104 Selenicereus undatus HOM05D002775 ORTHO05D003262 3.3e-07 58.2 68 50.0
Haze_20203 Corylus avellana HOM05D002775 ORTHO05D003262 4.4e-07 57.8 70 45.7
Nn7g36669 Nelumbo nucifera HOM05D002775 ORTHO05D003262 4.4e-07 57.8 70 44.3
Actinidia09266 Actinidia chinensis HOM05D002775 ORTHO05D003262 5.7e-07 57.4 69 46.4
Actinidia17943 Actinidia chinensis HOM05D002775 ORTHO05D003262 5.7e-07 57.4 69 46.4
Potri.006G040800 Populus trichocarpa HOM05D002775 ORTHO05D003262 5.7e-07 57.4 68 48.5
EL10Ac3g07198 Beta vulgaris HOM05D002775 ORTHO05D003262 7.4e-07 57.0 70 45.7
Glyma.03G130300 Glycine max HOM05D002775 ORTHO05D003262 7.4e-07 57.0 69 47.8
Phvul.001G126300 Phaseolus vulgaris HOM05D002775 ORTHO05D003262 7.4e-07 57.0 69 47.8
Potri.016G037600 Populus trichocarpa HOM05D002775 ORTHO05D003262 7.4e-07 57.0 70 45.7
Sabra16G0039600 Salix brachista HOM05D002775 ORTHO05D003262 7.4e-07 57.0 70 45.7
Sabra16G0044300 Salix brachista HOM05D002775 ORTHO05D003262 7.4e-07 57.0 70 45.7
VMungo1383G3448 Vigna mungo HOM05D002775 ORTHO05D003262 7.4e-07 57.0 69 47.8
Os07g0659400 Oryza sativa ssp. japonica HOM05D002775 ORTHO05D003262 1.3e-06 56.2 69 46.4
Sabra06G0027700 Salix brachista HOM05D002775 ORTHO05D003262 1.7e-06 55.8 68 47.1
Zm00001eb017260 Zea mays HOM05D002775 ORTHO05D003262 1.7e-06 55.8 95 40.0
ECA247G0461 Erigeron canadensis HOM05D002775 ORTHO05D003262 2.2e-06 55.5 70 47.1
HanXRQChr10g0292571 Helianthus annuus HOM05D002775 ORTHO05D003262 2.2e-06 55.5 70 47.1
Ah.13g076910 Amaranthus hybridus HOM05D002775 ORTHO05D003262 2.8e-06 55.1 69 44.9
unitig_8.g4554 Utricularia gibba HOM05D002775 ORTHO05D003262 3.7e-06 54.7 70 44.3


User provided reference genes

Program Settings