Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006876g0020 Nicotiana tabacum HOM05D005863 ORTHO05D003355 9.1e-201 703.4 356 100.0
Nitab4.5_0001159g0240 Nicotiana tabacum HOM05D005863 ORTHO05D003355 7.0e-177 624.0 356 89.9
Peaxi162Scf01762g00013 Petunia axillaris HOM05D005863 ORTHO05D003355 1.2e-75 287.7 208 72.1
Rhsim04G0012300 Rhododendron simsii HOM05D005863 ORTHO05D003355 3.3e-49 199.9 366 37.2
Hma1.2p1_2829F.1_g329210 Hydrangea macrophylla HOM05D005863 ORTHO05D003355 1.8e-47 194.1 386 36.5
vmacro09646 Vaccinium macrocarpon HOM05D005863 ORTHO05D003355 2.1e-43 180.6 372 36.3
Actinidia37152 Actinidia chinensis HOM05D005863 ORTHO05D003355 4.3e-41 172.9 364 35.2
GSVIVG01014696001 Vitis vinifera HOM05D005863 ORTHO05D003355 2.8e-40 170.2 382 31.9
Dinv10342 Davidia involucrata HOM05D005863 ORTHO05D003355 4.0e-39 166.4 344 36.3
CSS0034444 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D001683 1.2e-35 154.8 243 39.1
TAR629G0397 Trochodendron aralioides HOM05D005863 ORTHO05D003355 1.6e-32 144.4 389 30.8
QL08p003943 Quercus lobata HOM05D014719 ORTHO05D003355 1.8e-31 141.0 389 31.1
Cc05_g15010 Coffea canephora HOM05D005863 ORTHO05D003355 9.9e-30 135.2 362 30.7
CiPaw.12G138700 Carya illinoinensis HOM05D014719 ORTHO05D003355 2.9e-29 133.7 384 32.3
EL10Ac4g07554 Beta vulgaris HOM05D038882 ORTHO05D003355 7.9e-27 125.6 364 32.7
Nn1g07525 Nelumbo nucifera HOM05D005863 ORTHO05D003355 1.5e-25 121.3 389 30.8
Ciclev10008896m.g Citrus clementina HOM05D005863 ORTHO05D003355 4.3e-25 119.8 385 29.6
Cpa.g.sc12.119 Carica papaya HOM05D005863 ORTHO05D003355 1.3e-24 118.2 390 30.8
Sc16g0008130 Simmondsia chinensis HOM05D005863 ORTHO05D003355 2.1e-24 117.5 369 29.3
SGA_v2.0_scaffold171G38860 Striga asiatica HOM05D005863 ORTHO05D003355 4.8e-24 116.3 371 28.0
VMungo1309G2065 Vigna mungo HOM05D001598 ORTHO05D002757 4.0e-23 113.2 332 28.9
Prupe.8G267500 Prunus persica HOM05D014719 ORTHO05D003355 5.3e-23 112.8 336 31.5
Atru.chr2.3697 Acer truncatum HOM05D005863 ORTHO05D003355 1.5e-22 111.3 109 50.5
Eucgr.F03684 Eucalyptus grandis HOM05D005863 ORTHO05D003355 5.8e-22 109.4 380 27.4
Medtr2g036070 Medicago truncatula HOM05D005863 ORTHO05D003355 2.9e-21 107.1 332 29.8
SalBow6G1550 Salvia bowleyana HOM05D005863 ORTHO05D003355 3.8e-21 106.7 244 33.2
Hund23103 Selenicereus undatus HOM05D005863 ORTHO05D003355 3.8e-21 106.7 383 27.2
TPR.G1700 Trifolium pratense HOM05D005863 ORTHO05D003355 3.8e-21 106.7 316 27.8
Glyma.09G051600 Glycine max HOM05D005863 ORTHO05D003355 4.9e-21 106.3 339 28.6
CsaV3_7G011440 Cucumis sativus L. HOM05D031146 ORTHO05D003355 6.4e-21 105.9 342 30.7
Thecc.07G012300 Theobroma cacao HOM05D005863 ORTHO05D003355 1.9e-20 104.4 83 54.2
Gorai.013G152000 Gossypium raimondii HOM05D005863 ORTHO05D003355 5.5e-20 102.8 83 53.0
Gohir.A13G132200 Gossypium hirsutum HOM05D005863 ORTHO05D003355 9.3e-20 102.1 83 53.0
Lj6g0020676 Lotus japonicus HOM05D005863 ORTHO05D003355 9.3e-20 102.1 343 27.7
TWI38G1195 Tripterygium wilfordii HOM05D005863 ORTHO05D003355 9.3e-20 102.1 366 27.6
Lsat_1_v5_gn_7_114301 Lactuca sativa HOM05D005863 ORTHO05D003355 1.2e-19 101.7 84 51.2
Potri.007G102500 Populus trichocarpa HOM05D005863 ORTHO05D003355 1.6e-19 101.3 222 36.5
Gohir.D13G135600 Gossypium hirsutum HOM05D005863 ORTHO05D003355 2.1e-19 100.9 82 52.4
Psat1g149600 Pisum sativum HOM05D005863 ORTHO05D003355 2.1e-19 100.9 323 28.5
SalBow8G3261 Salvia bowleyana HOM05D005863 ORTHO05D003355 6.0e-19 99.4 255 32.2
Sed0025324 Sechium edule HOM05D031146 ORTHO05D003355 7.9e-19 99.0 377 27.6
MBI14_g22553_MAGBIO Magnolia biondii HOM05D005863 ORTHO05D003355 1.0e-18 98.6 126 37.3
Migut.A01086 Erythranthe guttata HOM05D005863 ORTHO05D003355 2.3e-18 97.4 251 33.1
Glyma.15G157900 Glycine max HOM05D005863 ORTHO05D003355 2.3e-18 97.4 324 28.1
Sabra07G0084200 Salix brachista HOM05D005863 ORTHO05D003355 3.0e-18 97.1 176 36.9
Lalb_Chr18g0052131 Lupinus albus HOM05D005863 ORTHO05D003355 6.7e-18 95.9 332 28.3
PGR031G0790 Punica granatum HOM05D005863 ORTHO05D003355 1.9e-17 94.4 354 28.2
arahy.Tifrunner.gnm1.ann1.9BU9L2 Arachis hypogaea HOM05D005863 ORTHO05D003355 2.5e-17 94.0 84 46.4
arahy.Tifrunner.gnm1.ann1.11ED70 Arachis hypogaea HOM05D005863 ORTHO05D003355 3.3e-17 93.6 84 46.4
Actinidia35403 Actinidia chinensis HOM05D005863 ORTHO05D003355 4.3e-17 93.2 280 30.7
RcHm_v2.0_Chr3g0496661 Rosa chinensis HOM05D014719 ORTHO05D003355 5.6e-17 92.8 352 28.4
ClCG09G021400 Citrullus lanatus HOM05D031146 ORTHO05D003355 9.6e-17 92.0 398 28.1
CANSAT78G1634 Cannabis sativa HOM05D005863 ORTHO05D003355 1.6e-16 91.3 85 49.4
HanXRQChr11g0334111 Helianthus annuus HOM05D005863 ORTHO05D003355 2.1e-16 90.9 75 53.3
Rhsim10G0199400 Rhododendron simsii HOM05D005863 ORTHO05D003355 3.7e-16 90.1 106 43.4
Rhsim10G0199200 Rhododendron simsii HOM05D005863 ORTHO05D003355 4.0e-15 86.7 240 31.2
Ca_02000_v3 Cicer arietinum L. HOM05D005863 ORTHO05D003355 6.9e-15 85.9 389 25.4
PSO339G2613 Papaver somniferum HOM05D005863 ORTHO05D003355 1.5e-14 84.7 85 45.9
Thhalv10011171m.g Eutrema salsugineum HOM05D000747 ORTHO05D001683 2.6e-14 84.0 83 47.0
PSO384G3490 Papaver somniferum HOM05D005863 ORTHO05D003355 2.6e-14 84.0 85 45.9
Carub.0001s4444 Capsella rubella HOM05D012516 ORTHO05D003355 5.8e-14 82.8 120 35.8
AL1G63990 Arabidopsis lyrata HOM05D012516 ORTHO05D003355 7.6e-14 82.4 153 34.0
Medtr2g036080 Medicago truncatula HOM05D007390 ORTHO05D009114 7.6e-14 82.4 116 37.9
THA.LOC104822728 Tarenaya hassleriana HOM05D012516 ORTHO05D003355 3.8e-13 80.1 74 50.0
BcaB02g10795 Brassica carinata HOM05D012516 ORTHO05D003355 1.4e-12 78.2 72 44.4
CARHR045560 Cardamine hirsuta HOM05D000747 ORTHO05D001683 1.9e-12 77.8 164 31.7
AT1G55865 Arabidopsis thaliana HOM05D012516 ORTHO05D003355 2.5e-12 77.4 71 47.9
BraA05t20625Z Brassica rapa HOM05D012516 ORTHO05D003355 3.2e-12 77.0 74 43.2
A05p17260 Brassica napus HOM05D012516 ORTHO05D003355 4.2e-12 76.6 74 44.6
Sp1g41465 Schrenkiella parvula HOM05D012516 ORTHO05D003355 4.2e-12 76.6 83 41.0
ATR0751G078 Amborella trichopoda HOM05D005863 ORTHO05D003355 6.0e-11 72.8 262 26.0
HPP92_027528 Vanilla planifolia HOM05D005863 ORTHO05D003355 1.8e-10 71.2 83 39.8
Prupe.1G239400 Prunus persica HOM05D005863 ORTHO05D017031 3.0e-10 70.5 71 42.3
HPP92_003025 Vanilla planifolia HOM05D048574 ORTHO05D003355 3.9e-10 70.1 83 39.8
C06p16270 Brassica napus HOM05D012516 ORTHO05D003355 5.1e-10 69.7 72 41.7
BolC6t36826H Brassica oleracea HOM05D012516 ORTHO05D003355 5.1e-10 69.7 72 41.7
AUR62024201 Chenopodium quinoa HOM05D025851 ORTHO05D044019 6.7e-10 69.3 67 43.3
BcaC08g44222 Brassica carinata HOM05D012516 ORTHO05D003355 8.7e-10 68.9 72 41.7
FvH4_1g28370 Fragaria vesca HOM05D014719 ORTHO05D003355 8.7e-10 68.9 113 36.3
PSO339G3984 Papaver somniferum HOM05D005863 ORTHO05D003355 8.7e-10 68.9 90 35.6
Psat5g094240 Pisum sativum HOM05D013281 ORTHO05D003355 1.9e-09 67.8 80 38.8
MSTRG.544 Avicennia marina HOM05D005863 ORTHO05D003355 3.3e-09 67.0 74 36.5
PSO384G2180 Papaver somniferum HOM05D005863 ORTHO05D003355 3.3e-09 67.0 85 34.1
SalBow2G2700 Salvia bowleyana HOM05D005863 ORTHO05D003355 3.3e-09 67.0 121 32.2
DCAR_001919 Daucus carota HOM05D005863 ORTHO05D003355 4.3e-09 66.6 148 35.1
PGSC0003DMG400010741 Solanum tuberosum HOM05D012928 ORTHO05D003355 5.7e-09 66.2 86 37.2
Haze_09834 Corylus avellana HOM05D014719 ORTHO05D003355 7.4e-09 65.9 241 29.0
Solyc05g014130.3 Solanum lycopersicum HOM05D012928 ORTHO05D003355 7.4e-09 65.9 86 36.0
vmacro01106 Vaccinium macrocarpon HOM05D005863 ORTHO05D003355 7.4e-09 65.9 77 40.3
Migut.K00651 Erythranthe guttata HOM05D005863 ORTHO05D003355 9.6e-09 65.5 68 41.2
Sopen05g009140 Solanum pennellii HOM05D012928 ORTHO05D003355 9.6e-09 65.5 83 36.1
ATR0824G200 Amborella trichopoda HOM05D005863 ORTHO05D003355 1.6e-08 64.7 89 32.6
ECA236G3808 Erigeron canadensis HOM05D000747 ORTHO05D001683 1.6e-08 64.7 49 55.1
Phvul.009G242100 Phaseolus vulgaris HOM05D005863 ORTHO05D003355 1.6e-08 64.7 266 25.9
Rhsim12G0037600 Rhododendron simsii HOM05D005863 ORTHO05D003355 1.6e-08 64.7 97 33.0
TPR.G14234 Trifolium pratense HOM05D013281 ORTHO05D003355 2.1e-08 64.3 129 29.5
Thhalv10023229m.g Eutrema salsugineum HOM05D008497 ORTHO05D003355 2.8e-08 63.9 79 36.7
SEGI_35034 Sequoiadendron giganteum HOM05D005863 ORTHO05D003355 2.8e-08 63.9 83 36.1
TAR629G1344 Trochodendron aralioides HOM05D005863 ORTHO05D003355 2.8e-08 63.9 86 33.7
Nn4g22491 Nelumbo nucifera HOM05D005863 ORTHO05D003355 3.7e-08 63.5 86 33.7
MELO3C010709.2 Cucumis melo HOM05D005863 ORTHO05D003355 4.8e-08 63.2 67 43.3
Medtr3g086220 Medicago truncatula HOM05D013281 ORTHO05D003355 4.8e-08 63.2 67 38.8
Sed0006554 Sechium edule HOM05D005863 ORTHO05D003355 4.8e-08 63.2 80 40.0
EL10As2g23204 Beta vulgaris HOM05D025851 ORTHO05D003355 6.3e-08 62.8 241 22.4
MSTRG.7960 Avicennia marina HOM05D005863 ORTHO05D003355 8.2e-08 62.4 80 33.8
Aa31LG10G330 Aethionema arabicum HOM05D000747 ORTHO05D001683 1.1e-07 62.0 102 32.4
FAN23G2175 Fragaria x ananassa HOM05D014719 ORTHO05D003355 1.1e-07 62.0 113 35.4
HanXRQChr08g0208041 Helianthus annuus HOM05D005863 ORTHO05D003355 1.1e-07 62.0 72 38.9
VMungo1383G2020 Vigna mungo HOM05D013281 ORTHO05D003355 1.1e-07 62.0 115 30.4
Phvul.001G257200 Phaseolus vulgaris HOM05D013281 ORTHO05D003355 1.4e-07 61.6 67 40.3
Sed0020016 Sechium edule HOM05D005863 ORTHO05D003355 1.4e-07 61.6 72 40.3
CsaV3_2G025110 Cucumis sativus L. HOM05D005863 ORTHO05D003355 1.8e-07 61.2 67 43.3
Peaxi162Scf00128g00645 Petunia axillaris HOM05D012928 ORTHO05D003355 1.8e-07 61.2 71 38.0
AUR62036468 Chenopodium quinoa HOM05D038882 ORTHO05D003355 2.4e-07 60.8 317 27.8
ClCG08G017500 Citrullus lanatus HOM05D005863 ORTHO05D003355 3.1e-07 60.5 67 41.8
Nitab4.5_0007393g0020 Nicotiana tabacum HOM05D012928 ORTHO05D003355 4.1e-07 60.1 100 31.0
Duzib213G0291 Durio zibethinus HOM05D005863 ORTHO05D003355 5.3e-07 59.7 54 48.1
PGR031G1574 Punica granatum HOM05D005863 ORTHO05D003355 5.3e-07 59.7 84 35.7
Nitab4.5_0000041g0190 Nicotiana tabacum HOM05D012928 ORTHO05D003355 9.0e-07 58.9 88 33.0
PSO017G4976 Papaver somniferum HOM05D040514 ORTHO05D003355 9.0e-07 58.9 79 30.4
PGR102G1092 Punica granatum HOM05D005863 ORTHO05D003355 9.0e-07 58.9 71 39.4
DCAR_024069 Daucus carota HOM05D005863 ORTHO05D003355 1.2e-06 58.5 71 35.2
Manes.12G018600 Manihot esculenta HOM05D005863 ORTHO05D003355 1.2e-06 58.5 67 37.3
Lj6A818T39 Lonicera japonica HOM05D005863 ORTHO05D003355 1.5e-06 58.2 68 38.2
Gorai.005G174200 Gossypium raimondii HOM05D005863 ORTHO05D003355 2.0e-06 57.8 75 36.0
Nitab4.5_0011762g0010 Nicotiana tabacum HOM05D012928 ORTHO05D003355 2.0e-06 57.8 161 24.8
Cpa.g.sc369.6 Carica papaya HOM05D005863 ORTHO05D003355 2.6e-06 57.4 96 31.2
Atru.chr11.2201 Acer truncatum HOM05D005863 ORTHO05D003355 3.4e-06 57.0 71 35.2
Dinv14763 Davidia involucrata HOM05D005863 ORTHO05D003355 3.4e-06 57.0 71 36.6
Sp7g05260 Schrenkiella parvula HOM05D008497 ORTHO05D003355 4.5e-06 56.6 149 24.8
THA.LOC104807749 Tarenaya hassleriana HOM05D008497 ORTHO05D003355 4.5e-06 56.6 68 38.2
Haze_12305 Corylus avellana HOM05D005863 ORTHO05D003355 5.9e-06 56.2 71 36.6
Gohir.A03G131400 Gossypium hirsutum HOM05D005863 ORTHO05D003355 5.9e-06 56.2 75 34.7
Lsat_1_v5_gn_8_150460 Lactuca sativa HOM05D005863 ORTHO05D003355 5.9e-06 56.2 113 30.1
BcaC04g22481 Brassica carinata HOM05D008497 ORTHO05D003355 7.6e-06 55.8 144 28.5
Cc11_g16250 Coffea canephora HOM05D012928 ORTHO05D003355 7.6e-06 55.8 79 30.4
Lalb_Chr11g0075601 Lupinus albus HOM05D005863 ORTHO05D003355 7.6e-06 55.8 80 36.2
Ciclev10030561m.g Citrus clementina HOM05D005863 ORTHO05D003355 1.0e-05 55.5 92 31.5


User provided reference genes

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