Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 4.1e-215 751.1 381 100.0
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 9.4e-204 713.4 379 96.8
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 6.1e-195 684.1 376 91.8
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 1.7e-192 676.0 377 91.2
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 2.2e-192 675.6 377 91.0
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 6.1e-187 657.5 376 88.8
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 3.4e-177 625.2 378 85.7
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 2.1e-163 579.3 370 80.0
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 4.0e-162 575.1 370 79.5
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 1.2e-161 573.5 372 78.8
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 4.2e-159 565.1 369 77.5
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 3.3e-156 555.4 361 78.9
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 7.3e-156 554.3 375 75.2
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 1.4e-154 550.1 372 74.5
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 4.0e-154 548.5 369 77.0
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 4.0e-154 548.5 369 77.0
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 2.6e-153 545.8 343 80.8
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 4.4e-153 545.0 370 75.9
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 9.9e-153 543.9 369 76.4
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 1.3e-152 543.5 365 77.5
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 3.2e-151 538.9 374 75.1
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 3.2e-151 538.9 355 78.9
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 4.2e-151 538.5 372 74.7
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 1.6e-150 536.6 364 75.8
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 1.6e-150 536.6 371 73.9
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 7.8e-150 534.3 385 73.8
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 1.0e-149 533.9 379 73.6
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.3e-149 533.5 373 74.5
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 2.3e-149 532.7 374 74.3
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 6.6e-149 531.2 345 78.6
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 1.1e-148 530.4 364 75.8
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 1.1e-148 530.4 382 73.6
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 1.9e-148 529.6 374 74.1
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 3.3e-148 528.9 373 75.3
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 3.3e-148 528.9 373 75.3
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 7.3e-148 527.7 372 75.3
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 7.3e-148 527.7 406 69.2
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 9.6e-148 527.3 374 72.7
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.6e-147 526.6 372 73.7
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 2.8e-147 525.8 332 79.5
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 4.8e-147 525.0 374 72.5
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 8.1e-147 524.2 375 74.7
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 8.1e-147 524.2 375 74.7
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 1.1e-146 523.9 372 75.3
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 1.1e-146 523.9 373 75.1
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 1.1e-146 523.9 350 76.9
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 1.1e-146 523.9 338 79.3
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 1.1e-146 523.9 365 75.1
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 1.4e-146 523.5 371 74.9
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 3.1e-146 522.3 376 73.7
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 5.3e-146 521.5 326 80.4
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 9.0e-146 520.8 373 74.5
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 1.5e-145 520.0 350 75.7
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 2.0e-145 519.6 372 75.3
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 3.4e-145 518.8 388 70.6
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 5.8e-145 518.1 346 77.7
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 7.6e-145 517.7 376 73.9
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 1.3e-144 516.9 366 75.1
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 1.7e-144 516.5 396 71.2
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 2.2e-144 516.2 384 72.4
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 3.8e-144 515.4 374 73.3
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 3.8e-144 515.4 337 78.6
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 3.8e-144 515.4 332 80.4
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 1.4e-143 513.5 382 72.8
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 1.2e-142 510.4 381 73.2
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.3e-141 506.9 363 74.1
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 2.3e-141 506.1 335 78.2
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 6.7e-141 504.6 341 77.1
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 3.3e-140 502.3 377 70.6
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 1.1e-138 497.3 369 71.3
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 1.1e-138 497.3 334 76.3
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 1.4e-138 496.9 392 68.1
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 2.4e-138 496.1 382 70.4
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 2.4e-138 496.1 384 69.5
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 2.6e-137 492.7 328 76.8
HanXRQChr16g0520501 Helianthus annuus HOM05D005463 ORTHO05D006900 3.4e-137 492.3 369 70.7
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 4.5e-137 491.9 364 72.3
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 5.8e-137 491.5 320 76.9
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 5.8e-137 491.5 351 73.2
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 7.6e-137 491.1 335 76.4
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 9.9e-137 490.7 369 71.0
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 9.9e-137 490.7 334 77.2
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 1.3e-136 490.3 368 70.4
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 2.2e-136 489.6 382 67.5
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 4.9e-136 488.4 349 71.6
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 4.9e-136 488.4 330 76.7
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 6.4e-136 488.0 371 69.8
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 6.4e-136 488.0 375 69.3
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 3.5e-134 482.3 370 70.3
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 4.6e-134 481.9 341 71.8
ECA234G3252 Erigeron canadensis HOM05D005463 ORTHO05D006900 2.3e-133 479.6 363 70.8
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 5.1e-133 478.4 333 74.5
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 7.4e-132 474.6 328 75.6
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 1.3e-131 473.8 321 76.9
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 6.2e-131 471.5 328 75.3
GSVIVG01032030001 Vitis vinifera HOM05D005463 ORTHO05D006900 2.4e-130 469.5 278 84.9
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 5.3e-130 468.4 364 70.9
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 4.2e-127 458.8 327 74.6
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 6.7e-125 451.4 374 65.5
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 1.2e-121 440.7 287 79.8
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 2.5e-119 433.0 383 62.7
HPP92_020287 Vanilla planifolia HOM05D005463 ORTHO05D006900 4.5e-113 412.1 288 73.3
Mapoly0087s0054 Marchantia polymorpha HOM05D005463 ORTHO05D006900 2.2e-112 409.8 275 74.2
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 1.1e-111 407.5 341 65.1
Pp3c10_8730 Physcomitrium patens HOM05D005463 ORTHO05D006900 2.1e-110 403.3 290 69.7
SMO174G0240 Selaginella moellendorffii HOM05D005463 ORTHO05D006900 4.7e-110 402.1 330 65.2
CBR_g4488 Chara braunii HOM05D005463 ORTHO05D006900 4.1e-106 389.0 312 62.8
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 3.5e-105 386.0 233 84.1
unitig_61.g26444 Utricularia gibba HOM05D005463 ORTHO05D006900 7.2e-103 378.3 300 68.7
ATR1100G030 Amborella trichopoda HOM05D005463 ORTHO05D006900 7.4e-100 368.2 298 63.8
Os01g0631200 Oryza sativa ssp. japonica HOM05D005463 ORTHO05D006900 5.7e-92 342.0 213 80.3
PRCOL_00005728 Prasinoderma coloniale HOM05D005463 ORTHO05D006900 1.0e-85 321.2 260 60.4
Cre09.g396401 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D006900 2.0e-84 317.0 282 59.2
MCO12G109 Micromonas commoda HOM05D005463 ORTHO05D006900 8.6e-80 301.6 258 58.9
MBI10_g23170_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 4.2e-79 299.3 237 68.8
Gohir.A10G063300 Gossypium hirsutum HOM05D005463 ORTHO05D006900 5.5e-79 298.9 237 67.5
Dinv43913 Davidia involucrata HOM05D005463 ORTHO05D006900 4.7e-78 295.8 204 73.5
TPR.G33976 Trifolium pratense HOM05D005463 ORTHO05D006900 2.0e-76 290.4 276 59.1
SEGI_24059 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 1.3e-67 261.2 174 75.9
RcHm_v2.0_Chr4g0408791 Rosa chinensis HOM05D005463 ORTHO05D006900 8.6e-64 248.4 158 80.4
MSTRG.17019 Avicennia marina HOM05D005463 ORTHO05D006900 1.9e-63 247.3 179 69.8
Hma1.2p1_1089F.1_g255720 Hydrangea macrophylla HOM05D005463 ORTHO05D006900 5.6e-63 245.7 187 69.0
Oeu010361.1 Olea europaea HOM05D005463 ORTHO05D006900 2.8e-62 243.4 186 67.2
MSTRG.17060 Avicennia marina HOM05D005463 ORTHO05D006900 2.3e-61 240.4 179 68.7
AagrBONN_evm.TU.Sc2ySwM_344.3224 Anthoceros agrestis HOM05D005463 ORTHO05D006900 2.0e-52 210.7 146 70.5
Prupe.I005100 Prunus persica HOM05D005463 ORTHO05D006900 1.4e-50 204.5 118 87.3
arahy.Tifrunner.gnm1.ann1.UWT5DF Arachis hypogaea HOM05D005463 ORTHO05D006900 8.6e-48 195.3 109 89.0
RcHm_v2.0_Chr6g0260851 Rosa chinensis HOM05D005463 ORTHO05D006900 3.6e-46 189.9 137 74.5
SEGI_02284 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 5.8e-36 156.0 108 71.3
Cfa024173 Carpinus fangiana HOM05D005463 ORTHO05D006900 1.0e-32 145.2 249 36.5
Cre12.g538650 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D044100 6.2e-30 136.0 244 34.4
Nn3g19661 Nelumbo nucifera HOM05D005463 ORTHO05D006900 8.4e-27 125.6 189 45.5
CAN.G244.9 Capsicum annuum HOM05D005463 ORTHO05D006900 1.4e-26 124.8 83 71.1
CAN.G762.7 Capsicum annuum HOM05D005463 ORTHO05D006900 2.1e-25 120.9 75 81.3
ATR0709G040 Amborella trichopoda HOM05D005463 ORTHO05D006900 2.3e-24 117.5 155 45.8
Haze_27481 Corylus avellana HOM05D005463 ORTHO05D006900 3.3e-23 113.6 167 38.9
MCO11G851 Micromonas commoda HOM05D005463 ORTHO05D044100 2.8e-22 110.5 241 29.9
RcHm_v2.0_Chr1g0375041 Rosa chinensis HOM05D005463 ORTHO05D006900 3.2e-18 97.1 50 94.0
RcHm_v2.0_Chr4g0408811 Rosa chinensis HOM05D005463 ORTHO05D006900 5.5e-18 96.3 111 51.4
MBI14_g30707_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 7.1e-18 95.9 73 63.0


User provided reference genes

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