Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 5.2e-40 167.2 79 100.0
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 4.1e-37 157.5 76 97.4
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.2e-36 156.0 77 94.8
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 7.8e-36 153.3 79 91.1
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 2.8e-33 144.8 77 85.7
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 1.1e-32 142.9 75 82.7
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 1.4e-32 142.5 77 85.7
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 2.4e-32 141.7 75 85.3
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 6.8e-32 140.2 77 84.4
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 8.9e-32 139.8 75 85.3
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 8.9e-32 139.8 75 78.7
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 1.2e-31 139.4 75 84.0
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 1.5e-31 139.0 77 83.1
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 2.0e-31 138.7 75 84.0
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 3.4e-31 137.9 75 82.7
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 7.6e-31 136.7 75 82.7
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 7.6e-31 136.7 79 81.0
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 9.9e-31 136.3 75 81.3
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 1.3e-30 136.0 75 80.0
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 2.2e-30 135.2 76 80.3
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 2.2e-30 135.2 75 78.7
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 3.8e-30 134.4 75 78.7
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 4.9e-30 134.0 76 77.6
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 8.4e-30 133.3 75 78.7
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 1.4e-29 132.5 75 78.7
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 1.4e-29 132.5 74 75.7
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 3.2e-29 131.3 75 77.3
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 4.1e-29 131.0 77 74.0
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 7.1e-29 130.2 77 79.2
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 7.1e-29 130.2 78 78.2
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 1.2e-28 129.4 75 73.3
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 1.6e-28 129.0 75 74.7
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 1.6e-28 129.0 76 73.7
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 1.6e-28 129.0 75 76.0
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 3.5e-28 127.9 75 73.3
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 3.5e-28 127.9 76 72.4
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 3.5e-28 127.9 75 73.3
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 6.0e-28 127.1 75 76.0
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 6.0e-28 127.1 76 75.0
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 1.0e-27 126.3 76 69.7
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 1.0e-27 126.3 75 73.3
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 1.0e-27 126.3 75 73.3
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 1.0e-27 126.3 75 72.0
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 1.3e-27 125.9 78 73.1
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 1.3e-27 125.9 76 71.1
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 3.0e-27 124.8 76 71.1
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 3.9e-27 124.4 70 77.1
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 1.1e-26 122.9 76 69.7
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 1.9e-26 122.1 76 71.1
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 2.5e-26 121.7 75 72.0
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 2.5e-26 121.7 75 69.3
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 3.3e-26 121.3 75 70.7
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 5.6e-26 120.6 75 72.0
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 7.3e-26 120.2 73 71.2
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 1.2e-25 119.4 78 67.9
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 1.6e-25 119.0 84 63.1
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.6e-25 119.0 77 66.2
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 2.1e-25 118.6 71 73.2
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 2.1e-25 118.6 77 66.2
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 3.6e-25 117.9 77 67.5
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 4.7e-25 117.5 73 71.2
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 6.2e-25 117.1 75 66.7
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 8.1e-25 116.7 78 65.4
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 1.1e-24 116.3 74 68.9
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 1.4e-24 115.9 73 68.5
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 1.8e-24 115.5 71 69.0
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 2.4e-24 115.2 76 65.8
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.4e-24 115.2 73 68.5
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.4e-24 115.2 73 68.5
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 2.4e-24 115.2 73 68.5
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 2.4e-24 115.2 76 67.1
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 2.4e-24 115.2 73 68.5
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 4.0e-24 114.4 73 67.1
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 5.2e-24 114.0 73 68.5
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 2.0e-23 112.1 73 67.1
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 3.4e-23 111.3 73 67.1
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 3.4e-23 111.3 73 67.1
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 4.4e-23 110.9 73 72.6
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 4.4e-23 110.9 75 64.0
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 4.4e-23 110.9 75 64.0
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 5.8e-23 110.5 77 62.3
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 5.8e-23 110.5 71 69.0
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 7.6e-23 110.2 73 64.4
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 1.3e-22 109.4 75 65.3
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 1.7e-22 109.0 80 62.5
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.7e-22 109.0 71 67.6
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 2.9e-22 108.2 73 61.6
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 1.4e-21 105.9 73 61.6
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 1.4e-21 105.9 73 61.6
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 2.4e-21 105.1 77 63.6
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.4e-21 105.1 73 64.4
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 4.2e-21 104.4 77 63.6
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 5.4e-21 104.0 75 56.0
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 9.3e-21 103.2 77 62.3
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 9.3e-21 103.2 77 62.3
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 9.3e-21 103.2 73 63.0
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 1.6e-20 102.4 75 64.0
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 2.1e-20 102.1 78 61.5
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 2.7e-20 101.7 74 63.5
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 3.5e-20 101.3 77 59.7
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 4.6e-20 100.9 74 59.5
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 4.6e-20 100.9 77 61.0
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 6.0e-20 100.5 77 61.0
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 7.8e-20 100.1 75 62.7
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 7.8e-20 100.1 77 61.0
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 1.3e-19 99.4 77 59.7
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 1.7e-19 99.0 75 62.7
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 2.3e-19 98.6 75 62.7
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 3.0e-19 98.2 74 56.8
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 3.9e-19 97.8 77 58.4
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 8.7e-19 96.7 77 57.1
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 1.5e-18 95.9 72 56.9
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 2.5e-18 95.1 77 57.1
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 2.5e-18 95.1 73 53.4
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 3.3e-18 94.7 75 53.3
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 1.5e-15 85.9 73 46.6
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 9.3e-13 76.6 40 80.0
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 3.5e-12 74.7 42 78.6
Lsat_1_v5_gn_2_96480 Lactuca sativa HOM05D006227 ORTHO05D007714 6.0e-12 73.9 55 63.6
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 1.3e-11 72.8 40 80.0
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 1.1e-10 69.7 40 75.0
Manes.04G009950 Manihot esculenta HOM05D006227 ORTHO05D007714 9.6e-10 66.6 37 73.0
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 1.6e-09 65.9 77 44.2
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 4.8e-09 64.3 48 60.4
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 5.3e-08 60.8 77 35.1
CDE11G0759 Ceratophyllum demersum HOM05D006227 ORTHO05D129109 9.9e-07 56.6 54 51.9
MCO03G239 Micromonas commoda HOM05D006227 ORTHO05D007714 2.9e-06 55.1 75 36.0


User provided reference genes

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