Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006831g0040 Nicotiana tabacum HOM05D008050 ORTHO05D003796 8.7e-142 506.9 248 100.0
Nitab4.5_0001366g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.0e-105 387.1 315 68.6
Nitab4.5_0013311g0020 Nicotiana tabacum HOM05D008050 ORTHO05D003796 3.4e-101 372.1 318 66.0
Nitab4.5_0001286g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 3.4e-69 265.8 281 56.9
Nitab4.5_0010542g0030 Nicotiana tabacum HOM05D008050 ORTHO05D003796 3.0e-49 199.5 197 57.4
Nitab4.5_0014453g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 8.4e-44 181.4 141 73.0
Nitab4.5_0023007g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 7.6e-37 158.3 313 36.4
Nitab4.5_0002471g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 3.5e-34 149.4 181 49.2
Nitab4.5_0011392g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 4.6e-34 149.1 140 59.3
Nitab4.5_0001745g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 3.9e-33 146.0 215 42.8
Nitab4.5_0001670g0030 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.1e-32 144.4 215 42.8
Nitab4.5_0000499g0070 Nicotiana tabacum HOM05D008050 ORTHO05D003796 2.1e-31 140.2 216 43.5
Nitab4.5_0003386g0050 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.1e-30 137.9 210 42.4
Nitab4.5_0001745g0020 Nicotiana tabacum HOM05D008050 ORTHO05D003796 2.4e-30 136.7 217 39.6
Nitab4.5_0007586g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 9.0e-30 134.8 229 40.2
Nitab4.5_0010159g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.5e-29 134.0 247 38.1
Nitab4.5_0015616g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 2.6e-29 133.3 229 39.7
Nitab4.5_0013311g0040 Nicotiana tabacum HOM05D008050 ORTHO05D282917 6.5e-28 128.6 156 53.2
Nitab4.5_0001745g0030 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.1e-27 127.9 176 44.3
Nitab4.5_0001670g0020 Nicotiana tabacum HOM05D008050 ORTHO05D003796 4.2e-27 125.9 190 44.7
Nitab4.5_0008183g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 2.7e-26 123.2 229 39.7
Nitab4.5_0002471g0020 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.3e-23 114.4 168 42.9
Sopen03g033310 Solanum pennellii HOM05D008050 ORTHO05D003796 2.8e-23 113.2 198 39.4
PGSC0003DMG400040550 Solanum tuberosum HOM05D008050 ORTHO05D003796 4.8e-23 112.5 298 31.5
Sopen03g033300 Solanum pennellii HOM05D008050 ORTHO05D003796 6.3e-23 112.1 198 38.9
Nitab4.5_0001286g0110 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.1e-22 111.3 174 42.5
PGSC0003DMG400037921 Solanum tuberosum HOM05D008050 ORTHO05D003796 1.1e-22 111.3 164 43.9
PGSC0003DMG400047167 Solanum tuberosum HOM05D008050 ORTHO05D003796 1.1e-22 111.3 297 29.6
PGSC0003DMG400045663 Solanum tuberosum HOM05D008050 ORTHO05D003796 1.4e-22 110.9 190 36.8
Peaxi162Scf00017g00243 Petunia axillaris HOM05D008050 ORTHO05D003796 3.1e-22 109.8 183 36.6
PGSC0003DMG400046943 Solanum tuberosum HOM05D008050 ORTHO05D003796 4.1e-22 109.4 298 29.9
PGSC0003DMG400039478 Solanum tuberosum HOM05D008050 ORTHO05D003796 5.3e-22 109.0 236 35.6
Solyc03g114260.1 Solanum lycopersicum HOM05D008050 ORTHO05D003796 2.0e-21 107.1 187 36.9
Solyc03g062670.1 Solanum lycopersicum HOM05D008050 ORTHO05D003796 5.9e-21 105.5 231 34.6
Sopen03g014990 Solanum pennellii HOM05D008050 ORTHO05D003796 1.3e-20 104.4 231 34.6
Solyc03g059300.1 Solanum lycopersicum HOM05D008050 ORTHO05D003796 8.5e-20 101.7 187 36.4
CAN.G853.5 Capsicum annuum HOM05D008050 ORTHO05D003796 1.1e-19 101.3 193 36.3
Sopen03g033360 Solanum pennellii HOM05D003268 ORTHO05D003796 1.9e-19 100.5 193 35.8
CAN.G853.22 Capsicum annuum HOM05D008050 ORTHO05D003796 4.2e-19 99.4 298 29.2
Nitab4.5_0005444g0040 Nicotiana tabacum HOM05D008050 ORTHO05D003796 4.2e-19 99.4 165 43.0
Solyc03g062750.1 Solanum lycopersicum HOM05D008050 ORTHO05D003796 1.6e-18 97.4 95 50.5
Sopen03g015050 Solanum pennellii HOM05D008050 ORTHO05D003796 2.7e-18 96.7 95 52.6
PGSC0003DMG400045571 Solanum tuberosum HOM05D008050 ORTHO05D003796 3.3e-16 89.7 84 54.8
Nitab4.5_0007586g0070 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.8e-14 84.0 81 55.6
Nitab4.5_0007586g0040 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.7e-12 77.4 174 37.4
CAN.G135.83 Capsicum annuum HOM05D008050 ORTHO05D003796 1.4e-09 67.8 240 28.3
CAN.G1424.7 Capsicum annuum HOM05D008050 ORTHO05D003796 1.8e-09 67.4 158 28.5
Nitab4.5_0002878g0020 Nicotiana tabacum HOM05D008050 ORTHO05D003796 5.1e-09 65.9 143 32.9
Nitab4.5_0000016g0610 Nicotiana tabacum HOM05D010426 ORTHO05D003796 8.8e-09 65.1 94 39.4
Nitab4.5_0000016g0630 Nicotiana tabacum HOM05D010426 ORTHO05D003796 8.8e-09 65.1 78 42.3
Nitab4.5_0007033g0050 Nicotiana tabacum HOM05D010426 ORTHO05D003796 1.1e-08 64.7 75 42.7
Nitab4.5_0008734g0030 Nicotiana tabacum HOM05D010426 ORTHO05D003796 1.1e-08 64.7 75 42.7
Solyc03g114220.1 Solanum lycopersicum HOM05D008050 ORTHO05D003796 1.1e-08 64.7 145 33.1
PGSC0003DMG400000154 Solanum tuberosum HOM05D009491 ORTHO05D003796 1.1e-08 64.7 77 40.3
Nitab4.5_0000016g0580 Nicotiana tabacum HOM05D010426 ORTHO05D003796 1.5e-08 64.3 72 44.4
Nitab4.5_0000016g0530 Nicotiana tabacum HOM05D010426 ORTHO05D003796 2.6e-08 63.5 94 38.3
Nitab4.5_0007033g0010 Nicotiana tabacum HOM05D010426 ORTHO05D003796 2.6e-08 63.5 75 42.7
Nitab4.5_0010629g0010 Nicotiana tabacum HOM05D010426 ORTHO05D003796 4.4e-08 62.8 77 42.9
Peaxi162Scf00244g00076 Petunia axillaris HOM05D008050 ORTHO05D003796 5.7e-08 62.4 78 42.3
Nitab4.5_0008515g0010 Nicotiana tabacum HOM05D010426 ORTHO05D003796 7.4e-08 62.0 94 39.4
Nitab4.5_0000016g0550 Nicotiana tabacum HOM05D010426 ORTHO05D003796 9.7e-08 61.6 75 41.3
Nitab4.5_0027357g0010 Nicotiana tabacum HOM05D010426 ORTHO05D003796 9.7e-08 61.6 75 40.0
PGSC0003DMG400036166 Solanum tuberosum HOM05D009491 ORTHO05D003796 1.3e-07 61.2 81 38.3
Nitab4.5_0001670g0010 Nicotiana tabacum HOM05D008050 ORTHO05D003796 1.7e-07 60.8 96 41.7
CAN.G2048.1 Capsicum annuum HOM05D008050 ORTHO05D003796 2.2e-07 60.5 75 42.7
CAN.G641.11 Capsicum annuum HOM05D008149 ORTHO05D010130 2.2e-07 60.5 85 40.0
Peaxi162Scf00692g00052 Petunia axillaris HOM05D010426 ORTHO05D003796 6.3e-07 58.9 91 34.1
Peaxi162Scf01327g00121 Petunia axillaris HOM05D003646 ORTHO05D004503 6.3e-07 58.9 91 34.1
Nitab4.5_0025925g0010 Nicotiana tabacum HOM05D010426 ORTHO05D003796 1.1e-06 58.2 75 40.0
CAN.G1095.3 Capsicum annuum HOM05D000069 ORTHO05D010130 1.4e-06 57.8 82 40.2
FAN02G4413 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.4e-06 57.0 92 34.8
Nitab4.5_0003562g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 2.4e-06 57.0 78 39.7
Ciclev10003273m.g Citrus clementina HOM05D000010 ORTHO05D000952 3.1e-06 56.6 100 38.0
Nitab4.5_0000082g0040 Nicotiana tabacum HOM05D008149 ORTHO05D010130 3.1e-06 56.6 79 39.2
Nitab4.5_0002160g0040 Nicotiana tabacum HOM05D009491 ORTHO05D003796 3.1e-06 56.6 82 35.4
Nitab4.5_0003111g0070 Nicotiana tabacum HOM05D009491 ORTHO05D003796 3.1e-06 56.6 87 35.6
CAN.G641.16 Capsicum annuum HOM05D008149 ORTHO05D010130 5.3e-06 55.8 85 36.5
Nitab4.5_0009087g0010 Nicotiana tabacum HOM05D009491 ORTHO05D003796 5.3e-06 55.8 81 35.8
Nitab4.5_0009210g0020 Nicotiana tabacum HOM05D009491 ORTHO05D003796 5.3e-06 55.8 81 35.8
Nitab4.5_0001874g0070 Nicotiana tabacum HOM05D008149 ORTHO05D010130 7.0e-06 55.5 79 36.7
Nitab4.5_0010957g0020 Nicotiana tabacum HOM05D008149 ORTHO05D010130 7.0e-06 55.5 79 39.2
CAN.G641.1 Capsicum annuum HOM05D008149 ORTHO05D010130 9.1e-06 55.1 82 36.6
FAN09G4772 Fragaria x ananassa HOM05D002630 ORTHO05D000952 9.1e-06 55.1 92 34.8
Peaxi162Scf00017g02638 Petunia axillaris HOM05D008050 ORTHO05D003796 9.1e-06 55.1 105 38.1


User provided reference genes

Program Settings