Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006806g0150 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.0e-69 266.5 131 100.0
Solyc00g500185.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 4.0e-53 211.5 188 62.8
Nitab4.5_0002287g0110 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.2e-52 209.9 157 70.7
Nitab4.5_0000623g0030 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.5e-52 209.5 217 55.8
Nitab4.5_0008916g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 4.6e-49 198.0 154 68.8
Peaxi162Scf00864g00009 Petunia axillaris HOM05D000533 ORTHO05D001069 2.0e-44 182.6 149 66.4
Peaxi162Scf00197g00026 Petunia axillaris HOM05D000533 ORTHO05D001069 2.2e-43 179.1 169 59.2
Nitab4.5_0001152g0630 Nicotiana tabacum HOM05D000533 ORTHO05D001069 4.9e-43 177.9 148 64.2
Nitab4.5_0002418g0130 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.1e-42 176.8 152 64.5
Nitab4.5_0001153g0040 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.1e-39 166.8 152 59.9
AUR62026824 Chenopodium quinoa HOM05D000533 ORTHO05D001069 3.6e-38 161.8 89 87.6
CAN.G4.19 Capsicum annuum HOM05D000533 ORTHO05D001069 6.2e-38 161.0 84 91.7
CAN.G1632.17 Capsicum annuum HOM05D000533 ORTHO05D001069 1.8e-37 159.5 84 91.7
Peaxi162Scf03098g00003 Petunia axillaris HOM05D000533 ORTHO05D001069 1.8e-37 159.5 84 91.7
Sopen05g012880 Solanum pennellii HOM05D000533 ORTHO05D001069 1.8e-37 159.5 84 91.7
Nitab4.5_0007336g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 9.0e-37 157.1 84 91.7
Ah.10g028350 Amaranthus hybridus HOM05D000533 ORTHO05D001069 1.5e-36 156.4 84 90.5
Aqoxy3G01139 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 1.5e-36 156.4 84 90.5
MSTRG.26041 Avicennia marina HOM05D000533 ORTHO05D001069 1.5e-36 156.4 84 90.5
AUR62043914 Chenopodium quinoa HOM05D000533 ORTHO05D001069 1.5e-36 156.4 84 90.5
Lsat_1_v5_gn_5_152661 Lactuca sativa HOM05D000533 ORTHO05D001069 1.5e-36 156.4 84 90.5
Lsat_1_v5_gn_7_25900 Lactuca sativa HOM05D000533 ORTHO05D001069 1.5e-36 156.4 84 90.5
Lsat_1_v5_gn_7_99760 Lactuca sativa HOM05D000533 ORTHO05D001069 1.5e-36 156.4 84 90.5
Lj2A1229G104 Lonicera japonica HOM05D000533 ORTHO05D001069 1.5e-36 156.4 84 90.5
Oeu013777.2 Olea europaea HOM05D000533 ORTHO05D001069 1.5e-36 156.4 84 90.5
unitig_87.g27982 Utricularia gibba HOM05D000533 ORTHO05D001069 1.5e-36 156.4 84 90.5
Aqoxy4G01612 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 4.4e-36 154.8 84 89.3
Lsat_1_v5_gn_4_123980 Lactuca sativa HOM05D000533 ORTHO05D001069 4.4e-36 154.8 84 89.3
Nitab4.5_0000127g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 4.4e-36 154.8 84 86.9
A04p09580 Brassica napus HOM05D000533 ORTHO05D001069 5.8e-36 154.5 92 83.7
BolSC28t60324H Brassica oleracea HOM05D000533 ORTHO05D001069 5.8e-36 154.5 92 83.7
BolSC28t60426H Brassica oleracea HOM05D000533 ORTHO05D001069 5.8e-36 154.5 92 83.7
Glyma.15G188000 Glycine max HOM05D000533 ORTHO05D001069 5.8e-36 154.5 84 89.3
SalBow1G6484 Salvia bowleyana HOM05D000533 ORTHO05D001069 7.6e-36 154.1 84 89.3
GSVIVG01004958001 Vitis vinifera HOM05D000533 ORTHO05D001069 7.6e-36 154.1 84 89.3
GSVIVG01006220001 Vitis vinifera HOM05D000533 ORTHO05D001069 7.6e-36 154.1 84 89.3
Cpa.g.sc263.15 Carica papaya HOM05D000533 ORTHO05D001069 1.3e-35 153.3 95 83.2
Cfa023036 Carpinus fangiana HOM05D000533 ORTHO05D001069 1.3e-35 153.3 84 89.3
HanXRQChr04g0109061 Helianthus annuus HOM05D000533 ORTHO05D001069 1.3e-35 153.3 84 89.3
HanXRQChr14g0434361 Helianthus annuus HOM05D000533 ORTHO05D001069 1.3e-35 153.3 84 89.3
HanXRQMTg0579581 Helianthus annuus HOM05D000533 ORTHO05D001069 1.3e-35 153.3 84 89.3
Sp3g25560 Schrenkiella parvula HOM05D000533 ORTHO05D001069 1.7e-35 152.9 87 87.4
arahy.Tifrunner.gnm1.ann1.0LI3ZC Arachis hypogaea HOM05D000533 ORTHO05D001069 2.2e-35 152.5 84 89.3
arahy.Tifrunner.gnm1.ann1.1S94M9 Arachis hypogaea HOM05D000533 ORTHO05D001069 2.2e-35 152.5 84 89.3
arahy.Tifrunner.gnm1.ann1.PQN9HV Arachis hypogaea HOM05D000533 ORTHO05D001069 2.2e-35 152.5 84 89.3
arahy.Tifrunner.gnm1.ann1.VAXL0Q Arachis hypogaea HOM05D000533 ORTHO05D001069 2.2e-35 152.5 84 89.3
arahy.Tifrunner.gnm1.ann1.WRNL5Y Arachis hypogaea HOM05D000533 ORTHO05D001069 2.2e-35 152.5 84 89.3
arahy.Tifrunner.gnm1.ann1.WT8VJC Arachis hypogaea HOM05D000533 ORTHO05D001069 2.2e-35 152.5 84 89.3
BraSC48t46291Z Brassica rapa HOM05D000533 ORTHO05D001069 2.2e-35 152.5 84 89.3
LjContig00315g0008577 Lotus japonicus HOM05D000533 ORTHO05D001069 2.2e-35 152.5 84 89.3
Lalb_Chr00c24g0407281 Lupinus albus HOM05D000533 ORTHO05D001069 2.2e-35 152.5 84 89.3
Ca_17162_v3 Cicer arietinum L. HOM05D000743 ORTHO05D000580 3.8e-35 151.8 88 84.1
Ca_26708_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 3.8e-35 151.8 88 84.1
Glyma.15G187666 Glycine max HOM05D000533 ORTHO05D001069 4.9e-35 151.4 84 88.1
arahy.Tifrunner.gnm1.ann1.C1VVMY Arachis hypogaea HOM05D000533 ORTHO05D001069 1.1e-34 150.2 84 88.1
C01p34650 Brassica napus HOM05D000533 ORTHO05D001069 1.4e-34 149.8 92 81.5
SabraMtG0006500 Salix brachista HOM05D000533 ORTHO05D001069 1.9e-34 149.4 84 88.1
arahy.Tifrunner.gnm1.ann1.VVPQ8E Arachis hypogaea HOM05D000533 ORTHO05D001069 2.4e-34 149.1 84 88.1
BolC1t03435H Brassica oleracea HOM05D000533 ORTHO05D001069 7.1e-34 147.5 84 86.9
RhsimMtG0002000 Rhododendron simsii HOM05D000533 ORTHO05D001069 9.3e-34 147.1 84 86.9
CAN.G811.5 Capsicum annuum HOM05D000533 ORTHO05D001069 4.6e-33 144.8 84 83.3
Sed0003286 Sechium edule HOM05D000533 ORTHO05D001069 4.6e-33 144.8 85 87.1
Sed0012936 Sechium edule HOM05D000533 ORTHO05D001069 4.6e-33 144.8 85 87.1
Sed0022170 Sechium edule HOM05D000533 ORTHO05D001069 4.6e-33 144.8 108 75.0
Sopen05g012870 Solanum pennellii HOM05D000533 ORTHO05D001069 4.6e-33 144.8 84 85.7
BraSC48t46305Z Brassica rapa HOM05D000533 ORTHO05D001069 6.0e-33 144.4 80 88.8
Lsat_1_v5_gn_4_3660 Lactuca sativa HOM05D003783 ORTHO05D001069 6.0e-33 144.4 83 85.5
Solyc01g065810.2 Solanum lycopersicum HOM05D000533 ORTHO05D001069 1.0e-32 143.7 84 82.1
Lsat_1_v5_gn_5_16060 Lactuca sativa HOM05D000533 ORTHO05D001069 1.3e-32 143.3 80 86.2
DCAR_032449 Daucus carota HOM05D000533 ORTHO05D001069 3.3e-31 138.7 75 88.0
CANSAT16G0052 Cannabis sativa HOM05D000533 ORTHO05D001069 9.6e-31 137.1 75 88.0
ATMG00510 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 4.0e-29 131.7 75 85.3
SEGI_01046 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 4.5e-28 128.3 75 82.7
SEGI_08012 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 4.5e-28 128.3 75 82.7
SEGI_25166 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 4.5e-28 128.3 75 82.7
Nitab4.5_0012067g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.8e-27 125.2 120 59.2
FvH4_2g05080 Fragaria vesca HOM05D000533 ORTHO05D001069 1.1e-26 123.6 73 83.6
FvH4_c1g00130 Fragaria vesca HOM05D000533 ORTHO05D001069 1.1e-26 123.6 73 83.6
FAN20G0581 Fragaria x ananassa HOM05D000533 ORTHO05D001069 1.1e-26 123.6 73 83.6
RcHm_v2.0_MTg0498261 Rosa chinensis HOM05D000533 ORTHO05D001069 1.1e-26 123.6 73 83.6
TPR.G29698 Trifolium pratense HOM05D000533 ORTHO05D001069 1.1e-26 123.6 69 87.0
CAN.G267.14 Capsicum annuum HOM05D000533 ORTHO05D001069 1.4e-26 123.2 65 89.2
SHI52562 Sapria himalayana HOM05D000533 ORTHO05D001069 5.5e-26 121.3 73 82.2
Nitab4.5_0001919g0100 Nicotiana tabacum HOM05D000533 ORTHO05D001069 9.3e-26 120.6 65 89.2
Thecc.08G163000 Theobroma cacao HOM05D000533 ORTHO05D001069 1.6e-25 119.8 84 72.6
Aa31csc1081G30 Aethionema arabicum HOM05D000533 ORTHO05D001069 7.9e-25 117.5 65 87.7
Nitab4.5_0008293g0010 Nicotiana tabacum HOM05D000533 ORTHO05D001069 7.9e-25 117.5 84 71.4
SMO053G0001 Selaginella moellendorffii HOM05D000533 ORTHO05D001069 7.9e-25 117.5 83 69.9
arahy.Tifrunner.gnm1.ann1.ELH4X7 Arachis hypogaea HOM05D000533 ORTHO05D001069 1.8e-24 116.3 65 87.7
Nitab4.5_0008578g0010 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.9e-24 115.2 65 84.6
Mapoly0011s0058 Marchantia polymorpha HOM05D000533 ORTHO05D001069 1.1e-23 113.6 73 74.0
CAN.G993.11 Capsicum annuum HOM05D000533 ORTHO05D001069 1.9e-23 112.8 65 83.1
AagrBONN_evm.TU.Sc2ySwM_117.4105 Anthoceros agrestis HOM05D000533 ORTHO05D001069 2.5e-23 112.5 73 75.3
Nitab4.5_0000172g0890 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.5e-23 112.5 78 71.8
Nitab4.5_0001152g0980 Nicotiana tabacum HOM05D000533 ORTHO05D001069 4.3e-23 111.7 62 85.5
Solyc12g036590.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 4.3e-23 111.7 63 85.7
SHI29300 Sapria himalayana HOM05D000533 ORTHO05D001069 9.6e-23 110.5 63 85.7
Aqoxy7G01636 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 1.1e-21 107.1 59 86.4
SHI42239 Sapria himalayana HOM05D000533 ORTHO05D001069 1.0e-19 100.5 64 75.0
CAN.G1.13 Capsicum annuum HOM05D000533 ORTHO05D001069 1.3e-19 100.1 52 88.5
CAN.G497.41 Capsicum annuum HOM05D000533 ORTHO05D001069 1.1e-18 97.1 53 83.0
ECA039G0028 Erigeron canadensis HOM05D003783 ORTHO05D004568 1.1e-18 97.1 84 60.7
SHI32387 Sapria himalayana HOM05D000533 ORTHO05D001069 1.1e-18 97.1 72 66.7
Cpa.g.sc200.35 Carica papaya HOM05D000533 ORTHO05D001069 1.9e-18 96.3 84 64.3
BraSC159t45735Z Brassica rapa HOM05D000533 ORTHO05D001069 4.2e-18 95.1 56 82.1
Cre09.g405850 Chlamydomonas reinhardtii HOM05D000533 ORTHO05D001069 2.1e-17 92.8 73 63.0
Haze_27200 Corylus avellana HOM05D000533 ORTHO05D001069 2.1e-17 92.8 73 57.5
PGSC0003DMG400029135 Solanum tuberosum HOM05D000533 ORTHO05D001069 1.0e-16 90.5 44 97.7
Cfa022526 Carpinus fangiana HOM05D000533 ORTHO05D001069 2.3e-16 89.4 73 56.2
COL.COLO4_01459 Corchorus olitorius HOM05D000533 ORTHO05D001069 3.0e-16 89.0 73 61.6
Solyc09g031577.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 5.1e-16 88.2 71 64.8
Haze_26686 Corylus avellana HOM05D000533 ORTHO05D001069 6.7e-16 87.8 73 54.8
Sed0003538 Sechium edule HOM05D000533 ORTHO05D001069 8.7e-16 87.4 51 88.2
PRCOL_00000735 Prasinoderma coloniale HOM05D000533 ORTHO05D001069 1.9e-15 86.3 73 58.9
SHI17974 Sapria himalayana HOM05D000533 ORTHO05D001069 1.9e-15 86.3 57 73.7
SHI11894 Sapria himalayana HOM05D000533 ORTHO05D001069 4.8e-14 81.6 61 67.2
SHI25676 Sapria himalayana HOM05D000533 ORTHO05D001069 1.4e-13 80.1 64 62.5
Nitab4.5_0000734g0150 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.0e-11 73.9 42 85.7
Nitab4.5_0001649g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.0e-11 73.9 66 59.1
Peaxi162Scf00197g00048 Petunia axillaris HOM05D000533 ORTHO05D001069 2.2e-11 72.8 57 71.9
ClCG08G009690 Citrullus lanatus HOM05D000533 ORTHO05D001069 6.5e-11 71.2 40 82.5
CsaV3_UNG208550 Cucumis sativus L. HOM05D000533 ORTHO05D001069 1.1e-10 70.5 39 84.6
HanXRQChr01g0003461 Helianthus annuus HOM05D000533 ORTHO05D001069 1.9e-10 69.7 36 91.7
ClCG05G017710 Citrullus lanatus HOM05D023369 ORTHO05D025092 1.8e-08 63.2 38 86.8
Oeu014139.1 Olea europaea HOM05D000533 ORTHO05D007817 1.8e-08 63.2 45 71.1


User provided reference genes

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