Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006775g0020 Nicotiana tabacum HOM05D006578 ORTHO05D008100 3.5e-127 458.4 244 100.0
Nitab4.5_0001210g0110 Nicotiana tabacum HOM05D006578 ORTHO05D008100 3.4e-106 388.7 229 93.4
Sopen08g030660 Solanum pennellii HOM05D006578 ORTHO05D008100 2.6e-98 362.5 230 85.2
PGSC0003DMG400044958 Solanum tuberosum HOM05D006578 ORTHO05D008100 1.6e-95 353.2 232 87.1
Peaxi162Scf00074g00082 Petunia axillaris HOM05D006578 ORTHO05D008100 3.9e-94 348.6 234 79.5
CAN.G1804.8 Capsicum annuum HOM05D006578 ORTHO05D008100 5.1e-94 348.2 236 83.9
Solyc08g082400.1 Solanum lycopersicum HOM05D006578 ORTHO05D008100 4.8e-92 341.7 234 83.3
Hma1.2p1_0359F.1_g135230 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 1.4e-72 276.9 235 63.0
Dinv37530 Davidia involucrata HOM05D006578 ORTHO05D008100 2.7e-71 272.7 230 62.2
CSS0036002 Camellia sinensis var. sinensis HOM05D006578 ORTHO05D008100 5.1e-70 268.5 224 65.6
MSTRG.11922 Avicennia marina HOM05D006578 ORTHO05D008100 2.0e-69 266.5 227 63.4
Cc08_g16100 Coffea canephora HOM05D006578 ORTHO05D008100 1.0e-65 254.2 224 58.9
Cpa.g.sc79.32 Carica papaya HOM05D006578 ORTHO05D008100 1.7e-65 253.4 221 59.3
Oeu009960.1 Olea europaea HOM05D006578 ORTHO05D008100 1.7e-65 253.4 221 62.9
Lsat_1_v5_gn_3_10861 Lactuca sativa HOM05D006578 ORTHO05D008100 5.0e-65 251.9 234 63.7
Lalb_Chr04g0256691 Lupinus albus HOM05D006578 ORTHO05D008100 5.0e-65 251.9 226 67.7
Ca_18845_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 1.4e-64 250.4 222 61.3
DCAR_029888 Daucus carota HOM05D006578 ORTHO05D008100 1.4e-64 250.4 236 57.2
TAR633G0540 Trochodendron aralioides HOM05D006578 ORTHO05D008100 1.9e-64 250.0 235 57.0
EL10Ac5g12919 Beta vulgaris HOM05D006578 ORTHO05D008100 2.5e-64 249.6 241 60.6
Glyma.07G075100 Glycine max HOM05D006578 ORTHO05D008100 3.2e-64 249.2 227 58.1
Manes.02G009600 Manihot esculenta HOM05D006578 ORTHO05D008100 4.2e-64 248.8 232 60.3
TWI60G1670 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 1.2e-63 247.3 213 61.0
Ah.07g197460 Amaranthus hybridus HOM05D006578 ORTHO05D008100 1.6e-63 246.9 242 56.6
Gohir.A05G346600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 1.6e-63 246.9 237 58.6
Actinidia27316 Actinidia chinensis HOM05D006578 ORTHO05D008100 2.1e-63 246.5 186 67.2
Potri.001G091300 Populus trichocarpa HOM05D006578 ORTHO05D008100 2.1e-63 246.5 223 59.2
PGR042G0620 Punica granatum HOM05D006578 ORTHO05D008100 2.1e-63 246.5 223 57.4
Migut.A00640 Erythranthe guttata HOM05D006578 ORTHO05D008100 2.7e-63 246.1 233 60.1
Phvul.010G094000 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 2.7e-63 246.1 224 59.4
AT4G23890 Arabidopsis thaliana HOM05D006578 ORTHO05D008100 8.0e-63 244.6 232 56.5
CARHR231290 Cardamine hirsuta HOM05D006578 ORTHO05D008100 8.0e-63 244.6 228 56.6
MELO3C016296.2 Cucumis melo HOM05D006578 ORTHO05D008100 8.0e-63 244.6 235 57.0
CsaV3_4G006610 Cucumis sativus L. HOM05D006578 ORTHO05D008100 8.0e-63 244.6 242 56.2
Sabra01G0067600 Salix brachista HOM05D006578 ORTHO05D008100 8.0e-63 244.6 214 60.3
Cfa012002 Carpinus fangiana HOM05D006578 ORTHO05D008100 1.0e-62 244.2 240 61.7
COL.COLO4_10707 Corchorus olitorius HOM05D006578 ORTHO05D008100 1.8e-62 243.4 234 59.0
VMungo0331G0206 Vigna mungo HOM05D005332 ORTHO05D006861 2.3e-62 243.0 226 58.8
Lj3g0025915 Lotus japonicus HOM05D006578 ORTHO05D008100 3.0e-62 242.7 216 59.3
Thecc.03G298500 Theobroma cacao HOM05D006578 ORTHO05D008100 3.0e-62 242.7 239 56.9
Medtr8g032260 Medicago truncatula HOM05D006578 ORTHO05D008100 3.9e-62 242.3 223 57.8
Ciclev10024562m.g Citrus clementina HOM05D006578 ORTHO05D008100 5.2e-62 241.9 234 56.4
unitig_32.g10973 Utricularia gibba HOM05D006578 ORTHO05D008100 8.8e-62 241.1 241 56.0
ECA246G0449 Erigeron canadensis HOM05D001832 ORTHO05D001861 1.1e-61 240.7 228 63.6
CiPaw.11G120900 Carya illinoinensis HOM05D006578 ORTHO05D008100 1.5e-61 240.4 229 58.5
Atru.chr9.1977 Acer truncatum HOM05D006578 ORTHO05D008100 2.0e-61 240.0 231 57.6
Atru.chr9.1992 Acer truncatum HOM05D006578 ORTHO05D008100 2.0e-61 240.0 231 57.6
BcaNung01096 Brassica carinata HOM05D006578 ORTHO05D008100 2.0e-61 240.0 228 56.1
Potri.003G140400 Populus trichocarpa HOM05D006578 ORTHO05D008100 2.0e-61 240.0 223 57.4
BraA01t01458Z Brassica rapa HOM05D006578 ORTHO05D008100 2.6e-61 239.6 225 55.6
Carub.0007s1722 Capsella rubella HOM05D006578 ORTHO05D008100 2.6e-61 239.6 228 57.0
THA.LOC104815081 Tarenaya hassleriana HOM05D006578 ORTHO05D008100 4.4e-61 238.8 234 56.0
FAN18G3822 Fragaria x ananassa HOM05D006578 ORTHO05D008100 9.7e-61 237.7 236 58.1
FvH4_5g04650 Fragaria vesca HOM05D006578 ORTHO05D008100 1.3e-60 237.3 236 58.1
FAN18G0518 Fragaria x ananassa HOM05D006578 ORTHO05D008100 1.7e-60 236.9 236 58.1
Thhalv10027518m.g Eutrema salsugineum HOM05D006578 ORTHO05D008100 2.2e-60 236.5 220 57.3
AL7G29450 Arabidopsis lyrata HOM05D006578 ORTHO05D008100 2.8e-60 236.1 232 55.2
BcaNung04080 Brassica carinata HOM05D006578 ORTHO05D008100 2.8e-60 236.1 234 54.3
ATR0796G340 Amborella trichopoda HOM05D006578 ORTHO05D008100 4.8e-60 235.3 239 54.4
A01p15200 Brassica napus HOM05D006578 ORTHO05D008100 6.3e-60 235.0 230 54.8
HanXRQChr17g0534801 Helianthus annuus HOM05D006578 ORTHO05D008100 8.2e-60 234.6 228 63.6
ClCG07G011600 Citrullus lanatus HOM05D006578 ORTHO05D008100 2.4e-59 233.0 235 55.3
Duzib068G0825 Durio zibethinus HOM05D006578 ORTHO05D008100 2.4e-59 233.0 236 55.5
BolC1t01839H Brassica oleracea HOM05D006578 ORTHO05D008100 3.1e-59 232.6 231 54.5
C01p19130 Brassica napus HOM05D006578 ORTHO05D008100 4.1e-59 232.3 231 54.5
Aa31LG6G7150 Aethionema arabicum HOM05D006578 ORTHO05D008100 5.3e-59 231.9 230 53.9
AUR62010844 Chenopodium quinoa HOM05D006578 ORTHO05D008100 5.3e-59 231.9 240 56.2
Prupe.5G120500 Prunus persica HOM05D006578 ORTHO05D008100 1.2e-58 230.7 242 55.8
Sp7g21850 Schrenkiella parvula HOM05D006578 ORTHO05D008100 1.2e-58 230.7 231 54.5
BcaC09g50934 Brassica carinata HOM05D006578 ORTHO05D008100 2.0e-58 229.9 181 65.2
A03p54830 Brassica napus HOM05D006578 ORTHO05D008100 4.5e-58 228.8 226 61.1
BraA03t14550Z Brassica rapa HOM05D006578 ORTHO05D008100 1.3e-57 227.3 226 58.4
FAN04G1820 Fragaria x ananassa HOM05D006578 ORTHO05D008100 1.7e-57 226.9 236 56.4
Haze_09067 Corylus avellana HOM05D006578 ORTHO05D008100 2.2e-57 226.5 173 65.3
Sed0010985 Sechium edule HOM05D006578 ORTHO05D008100 2.9e-57 226.1 222 55.4
FAN13G1942 Fragaria x ananassa HOM05D006578 ORTHO05D008100 3.8e-57 225.7 236 55.9
QL02p030348 Quercus lobata HOM05D006578 ORTHO05D008100 3.8e-57 225.7 179 64.8
FAN08G0426 Fragaria x ananassa HOM05D006578 ORTHO05D008100 8.5e-57 224.6 236 55.9
Lj2P167T19 Lonicera japonica HOM05D006578 ORTHO05D008100 1.1e-56 224.2 179 62.6
Hma1.2p1_0359F.1_g135240 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 1.6e-55 220.3 129 80.6
Gohir.D04G065600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 6.7e-54 214.9 232 54.3
Gorai.012G073800 Gossypium raimondii HOM05D006578 ORTHO05D008100 1.2e-53 214.2 232 54.3
AUR62019843 Chenopodium quinoa HOM05D006578 ORTHO05D008100 4.8e-52 208.8 239 57.3
PSO761G0627 Papaver somniferum HOM05D006578 ORTHO05D008100 1.1e-51 207.6 251 55.0
PSO210G4984 Papaver somniferum HOM05D006578 ORTHO05D008100 2.0e-50 203.4 251 54.2
Zm00001eb224490 Zea mays HOM05D006578 ORTHO05D008100 1.3e-49 200.7 203 53.2
SEGI_09764 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 5.0e-49 198.7 182 54.4
SEGI_13573 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 5.0e-49 198.7 244 46.3
Os07g0196200 Oryza sativa ssp. japonica HOM05D006578 ORTHO05D008100 1.1e-48 197.6 179 62.0
Aqoxy2G01516 Aquilegia oxysepala HOM05D006578 ORTHO05D008100 2.7e-47 193.0 248 51.2
Psat4g152960 Pisum sativum HOM05D006578 ORTHO05D008100 3.6e-47 192.6 226 50.4
FAN13G3291 Fragaria x ananassa HOM05D006578 ORTHO05D008100 1.1e-43 181.0 230 50.0
Sabra03G0101400 Salix brachista HOM05D006578 ORTHO05D008100 2.3e-41 173.3 223 46.2
GSVIVG01019536001 Vitis vinifera HOM05D006578 ORTHO05D008100 4.2e-40 169.1 230 45.2
Mapoly0067s0043 Marchantia polymorpha HOM05D006578 ORTHO05D008100 8.0e-39 164.9 205 42.9
Pp3c11_19730 Physcomitrium patens HOM05D006578 ORTHO05D008100 3.0e-38 162.9 219 39.7
AagrBONN_evm.TU.Sc2ySwM_117.36 Anthoceros agrestis HOM05D006578 ORTHO05D008100 8.9e-38 161.4 230 43.0
SMO146G0113 Selaginella moellendorffii HOM05D006578 ORTHO05D008100 2.9e-33 146.4 183 46.4
CBR_g28643 Chara braunii HOM05D006578 ORTHO05D008100 1.9e-32 143.7 187 42.8
SalBow1G4365 Salvia bowleyana HOM05D006578 ORTHO05D008100 1.0e-25 121.3 208 43.8
SalBow1G5827 Salvia bowleyana HOM05D006578 ORTHO05D008100 1.0e-25 121.3 208 43.8
BcaNung04242 Brassica carinata HOM05D006578 ORTHO05D008100 4.3e-24 115.9 164 43.3
C07p53190 Brassica napus HOM05D006578 ORTHO05D008100 4.3e-24 115.9 164 43.3
BolC7t45814H Brassica oleracea HOM05D006578 ORTHO05D008100 4.3e-24 115.9 164 43.3
Medtr7g076620 Medicago truncatula HOM05D006578 ORTHO05D008100 1.2e-23 114.4 144 45.1
VMungo1383G2377 Vigna mungo HOM05D006578 ORTHO05D008100 6.2e-23 112.1 132 59.1
Phvul.008G068900 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 8.0e-23 111.7 139 58.3
Glyma.09G263100 Glycine max HOM05D006578 ORTHO05D008100 1.4e-22 110.9 132 57.6
TWI81G0713 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 1.4e-22 110.9 123 50.4
arahy.Tifrunner.gnm1.ann1.6WXN94 Arachis hypogaea HOM05D006578 ORTHO05D008100 5.2e-22 109.0 131 49.6
Psat3g111760 Pisum sativum HOM05D006578 ORTHO05D008100 1.5e-21 107.5 150 52.0
arahy.Tifrunner.gnm1.ann1.UYM9MT Arachis hypogaea HOM05D006578 ORTHO05D008100 7.5e-21 105.1 138 50.0
Glyma.18G229100 Glycine max HOM05D006578 ORTHO05D008100 7.5e-21 105.1 140 51.4
Ca_07882_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 1.7e-20 104.0 144 42.4
Sc07g0010050 Simmondsia chinensis HOM05D006578 ORTHO05D008100 1.7e-20 104.0 166 48.2
TPR.G17579 Trifolium pratense HOM05D006578 ORTHO05D008100 8.3e-20 101.7 145 40.7
SGA_v2.0_scaffold96G29015 Striga asiatica HOM05D003962 ORTHO05D004714 1.4e-19 100.9 187 39.0
Sabra15G0075700 Salix brachista HOM05D000345 ORTHO05D000215 4.1e-19 99.4 170 37.1
CiPaw.12G082500 Carya illinoinensis HOM05D006578 ORTHO05D008100 7.0e-19 98.6 135 45.2
Lj1g0003243 Lotus japonicus HOM05D006578 ORTHO05D008100 9.2e-19 98.2 135 51.1
HPP92_001215 Vanilla planifolia HOM05D006578 ORTHO05D008100 2.5e-16 90.1 144 40.3
Nn4g25270 Nelumbo nucifera HOM05D006578 ORTHO05D008100 4.4e-13 79.3 118 41.5
Glyma.03G015000 Glycine max HOM05D006578 ORTHO05D008100 1.3e-12 77.8 132 40.9
Oeu054024.1 Olea europaea HOM05D006578 ORTHO05D008100 2.8e-07 60.1 54 55.6
Sabra10G0172600 Salix brachista HOM05D006578 ORTHO05D008100 2.4e-06 57.0 35 74.3


User provided reference genes

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