Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006773g0030 Nicotiana tabacum HOM05D007853 ORTHO05D009873 2.9e-136 488.4 226 100.0
Solyc06g083550.1 Solanum lycopersicum HOM05D007853 ORTHO05D009873 1.2e-92 343.6 264 64.4
PGSC0003DMG400020089 Solanum tuberosum HOM05D007853 ORTHO05D009873 2.6e-92 342.4 264 64.4
Sopen06g034930 Solanum pennellii HOM05D007853 ORTHO05D009873 9.9e-92 340.5 264 64.0
CAN.G771.60 Capsicum annuum HOM05D007853 ORTHO05D009873 4.0e-85 318.5 273 59.7
Lj1C83T5 Lonicera japonica HOM05D007853 ORTHO05D009873 5.1e-80 301.6 282 53.9
Dinv04666 Davidia involucrata HOM05D007853 ORTHO05D009873 1.6e-78 296.6 258 56.6
Peaxi162Scf00517g00042 Petunia axillaris HOM05D007853 ORTHO05D009873 3.6e-78 295.4 248 60.9
Actinidia09494 Actinidia chinensis HOM05D007853 ORTHO05D009873 5.3e-77 291.6 265 55.5
TAR636G2687 Trochodendron aralioides HOM05D007853 ORTHO05D009873 9.0e-77 290.8 259 54.8
Hma1.2p1_1061F.1_g253350 Hydrangea macrophylla HOM05D007853 ORTHO05D009873 1.9e-74 283.1 263 55.5
vmacro14766 Vaccinium macrocarpon HOM05D007853 ORTHO05D009873 1.6e-73 280.0 253 55.7
Ciclev10020523m.g Citrus clementina HOM05D007853 ORTHO05D009873 7.9e-73 277.7 276 51.1
CSS0040524 Camellia sinensis var. sinensis HOM05D007853 ORTHO05D009873 1.3e-72 276.9 261 53.6
Manes.12G041900 Manihot esculenta HOM05D007853 ORTHO05D009873 3.0e-72 275.8 268 51.5
CiPaw.04G106700 Carya illinoinensis HOM05D007853 ORTHO05D009873 5.6e-71 271.6 269 50.6
Cfa002555 Carpinus fangiana HOM05D007853 ORTHO05D009873 9.6e-71 270.8 269 50.9
Thecc.01G228200 Theobroma cacao HOM05D007853 ORTHO05D009873 1.3e-70 270.4 267 50.6
MBI10_g16828_MAGBIO Magnolia biondii HOM05D007853 ORTHO05D009873 6.2e-70 268.1 259 51.0
Prupe.8G204900 Prunus persica HOM05D007853 ORTHO05D009873 3.4e-68 262.3 258 51.2
Oeu015462.1 Olea europaea HOM05D007853 ORTHO05D009873 4.5e-68 261.9 257 50.2
FAN24G3434 Fragaria x ananassa HOM05D007853 ORTHO05D009873 1.7e-67 260.0 254 49.6
Gohir.D11G142600 Gossypium hirsutum HOM05D007853 ORTHO05D009873 2.9e-67 259.2 264 49.6
Gorai.007G152900 Gossypium raimondii HOM05D007853 ORTHO05D009873 6.4e-67 258.1 262 49.2
CiPaw.03G151300 Carya illinoinensis HOM05D007853 ORTHO05D009873 1.1e-66 257.3 267 48.3
FvH4_2g19330 Fragaria vesca HOM05D007853 ORTHO05D009873 1.9e-66 256.5 256 49.6
FAN15G1839 Fragaria x ananassa HOM05D007853 ORTHO05D009873 3.2e-66 255.8 255 49.8
ATR0787G102 Amborella trichopoda HOM05D007853 ORTHO05D009873 4.2e-66 255.4 257 49.0
Duzib133G0551 Durio zibethinus HOM05D007853 ORTHO05D009873 4.2e-66 255.4 265 49.1
FAN27G0897 Fragaria x ananassa HOM05D007853 ORTHO05D009873 4.2e-66 255.4 257 49.4
Gohir.A11G136300 Gossypium hirsutum HOM05D007853 ORTHO05D009873 1.6e-65 253.4 263 49.0
QL09p044713 Quercus lobata HOM05D007853 ORTHO05D009873 1.6e-65 253.4 295 45.8
Lsat_1_v5_gn_5_179800 Lactuca sativa HOM05D007853 ORTHO05D009873 3.5e-65 252.3 271 47.2
MD05G1178400 Malus domestica HOM05D007853 ORTHO05D009873 7.9e-65 251.1 270 48.1
RcHm_v2.0_Chr6g0285141 Rosa chinensis HOM05D007853 ORTHO05D009873 3.9e-64 248.8 254 49.6
Actinidia23732 Actinidia chinensis HOM05D007853 ORTHO05D009873 1.9e-63 246.5 240 53.8
PGR044G1509 Punica granatum HOM05D007853 ORTHO05D009873 2.8e-62 242.7 270 47.4
HanXRQChr01g0014671 Helianthus annuus HOM05D007853 ORTHO05D009873 3.7e-62 242.3 269 44.6
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 4.0e-61 238.8 260 46.5
Haze_24777 Corylus avellana HOM05D007853 ORTHO05D009873 1.5e-60 236.9 216 53.2
Phvul.008G123400 Phaseolus vulgaris HOM05D007853 ORTHO05D009873 2.0e-60 236.5 269 45.7
ClCG09G009130 Citrullus lanatus HOM05D007853 ORTHO05D009873 5.8e-60 235.0 265 44.2
Glyma.18G173200 Glycine max HOM05D007853 ORTHO05D009873 5.8e-60 235.0 269 45.0
VMungo1383G0232 Vigna mungo HOM05D007853 ORTHO05D009873 5.8e-60 235.0 269 45.4
Lalb_Chr03g0041891 Lupinus albus HOM05D007853 ORTHO05D009873 7.6e-60 234.6 257 44.7
Glyma.08G356100 Glycine max HOM05D007853 ORTHO05D009873 1.0e-59 234.2 270 44.4
Lj1g0009384 Lotus japonicus HOM05D007853 ORTHO05D009873 1.9e-58 229.9 269 44.6
Medtr0197s0070 Medicago truncatula HOM05D007853 ORTHO05D009873 1.6e-57 226.9 254 45.7
Medtr7g059040 Medicago truncatula HOM05D007853 ORTHO05D009873 1.6e-57 226.9 254 45.7
SEGI_02257 Sequoiadendron giganteum HOM05D007853 ORTHO05D009873 2.7e-57 226.1 257 44.4
TPR.G15291 Trifolium pratense HOM05D007853 ORTHO05D009873 3.5e-57 225.7 267 45.7
THA.LOC104804604 Tarenaya hassleriana HOM05D007853 ORTHO05D009873 1.3e-56 223.8 269 43.5
Ca_07539_v3 Cicer arietinum L. HOM05D007853 ORTHO05D009873 2.3e-56 223.0 256 44.5
TWI18G0437 Tripterygium wilfordii HOM05D007853 ORTHO05D009873 3.9e-56 222.2 249 46.2
Psat3g143800 Pisum sativum HOM05D007853 ORTHO05D009873 5.1e-56 221.9 255 44.7
DCAR_000536 Daucus carota HOM05D007853 ORTHO05D009873 4.3e-55 218.8 258 45.3
Aa31LG8G11920 Aethionema arabicum HOM05D007853 ORTHO05D009873 5.7e-55 218.4 266 42.9
Thhalv10002571m.g Eutrema salsugineum HOM05D007853 ORTHO05D009873 5.7e-55 218.4 266 42.5
Sp3g22500 Schrenkiella parvula HOM05D007853 ORTHO05D009873 5.7e-55 218.4 266 41.4
BcaB06g26693 Brassica carinata HOM05D007853 ORTHO05D009873 4.8e-54 215.3 266 41.4
AT3G24760 Arabidopsis thaliana HOM05D007853 ORTHO05D009873 4.1e-53 212.2 280 41.8
CARHR101120 Cardamine hirsuta HOM05D007853 ORTHO05D009873 4.1e-53 212.2 269 40.1
GSVIVG01028563001 Vitis vinifera HOM05D007853 ORTHO05D009873 2.6e-52 209.5 215 50.7
AL3G40490 Arabidopsis lyrata HOM05D007853 ORTHO05D009873 4.5e-52 208.8 284 40.5
BcaC06g35750 Brassica carinata HOM05D007853 ORTHO05D009873 1.3e-51 207.2 267 40.1
BolC7t41605H Brassica oleracea HOM05D007853 ORTHO05D009873 1.3e-51 207.2 267 40.1
Carub.0003s2515 Capsella rubella HOM05D007853 ORTHO05D009873 1.3e-51 207.2 285 40.0
C07p11280 Brassica napus HOM05D007853 ORTHO05D009873 2.2e-51 206.5 267 39.7
A07p07510 Brassica napus HOM05D007853 ORTHO05D009873 1.2e-49 200.7 267 38.6
BraA07t28542Z Brassica rapa HOM05D007853 ORTHO05D009873 1.2e-49 200.7 267 38.6
Nn3g19919 Nelumbo nucifera HOM05D007853 ORTHO05D009873 4.3e-47 192.2 114 72.8
Atru.chr5.2009 Acer truncatum HOM05D007853 ORTHO05D009873 7.7e-44 181.4 116 67.2
Lalb_Chr00c01g0403781 Lupinus albus HOM05D007853 ORTHO05D009873 1.4e-29 134.0 132 51.5
Dinv40740 Davidia involucrata HOM05D003931 ORTHO05D004577 7.2e-18 95.1 59 67.8
Mapoly0119s0024 Marchantia polymorpha HOM05D007853 ORTHO05D009873 3.7e-14 82.8 113 31.9
SEGI_02380 Sequoiadendron giganteum HOM05D007853 ORTHO05D009873 7.7e-12 75.1 43 79.1
Pp3c2_14180 Physcomitrium patens HOM05D007853 ORTHO05D009873 2.5e-10 70.1 250 22.8


User provided reference genes

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