Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006762g0030 Nicotiana tabacum HOM05D000509 ORTHO05D006393 5.3e-70 267.7 147 100.0
Nitab4.5_0000583g0080 Nicotiana tabacum HOM05D000509 ORTHO05D006393 6.9e-62 240.7 146 93.2
CAN.G78.80 Capsicum annuum HOM05D000509 ORTHO05D006393 2.5e-51 205.7 149 81.2
PGSC0003DMG400000042 Solanum tuberosum HOM05D000509 ORTHO05D006393 7.2e-51 204.1 148 81.1
Solyc01g094630.3 Solanum lycopersicum HOM05D000509 ORTHO05D006393 5.9e-45 184.5 148 75.7
Sopen01g038440 Solanum pennellii HOM05D000509 ORTHO05D006393 9.4e-43 177.2 148 73.0
Dinv41795 Davidia involucrata HOM05D000509 ORTHO05D006393 2.9e-28 129.0 146 54.1
MSTRG.20833 Avicennia marina HOM05D000509 ORTHO05D006393 4.7e-26 121.7 146 54.1
Cc02_g38030 Coffea canephora HOM05D000509 ORTHO05D006393 1.8e-25 119.8 145 50.3
CSS0014656 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 1.2e-24 117.1 145 53.8
ECA233G2837 Erigeron canadensis HOM05D000509 ORTHO05D006393 1.5e-24 116.7 143 52.4
GSVIVG01008341001 Vitis vinifera HOM05D000509 ORTHO05D006393 5.7e-24 114.8 135 54.8
SalBow6G4776 Salvia bowleyana HOM05D000509 ORTHO05D006393 1.1e-22 110.5 148 52.0
Gohir.A02G020500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 3.1e-22 109.0 139 49.6
Gohir.A08G013720 Gossypium hirsutum HOM05D000509 ORTHO05D006393 3.1e-22 109.0 139 49.6
Gorai.005G030400 Gossypium raimondii HOM05D000509 ORTHO05D006393 3.1e-22 109.0 136 50.7
Actinidia12704 Actinidia chinensis HOM05D000509 ORTHO05D006393 4.1e-22 108.6 147 51.0
Gohir.D02G024500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 4.1e-22 108.6 136 50.0
Rhsim07G0117300 Rhododendron simsii HOM05D000509 ORTHO05D006393 4.1e-22 108.6 147 46.3
Actinidia33421 Actinidia chinensis HOM05D001542 ORTHO05D001416 1.6e-21 106.7 148 50.7
Cpa.g.sc11.3 Carica papaya HOM05D000509 ORTHO05D006393 3.5e-21 105.5 142 47.2
DCAR_019105 Daucus carota HOM05D000509 ORTHO05D006393 3.5e-21 105.5 141 49.6
Peaxi162Scf00020g00322 Petunia axillaris HOM05D000509 ORTHO05D006393 4.5e-21 105.1 122 61.5
Sabra02G0116600 Salix brachista HOM05D000509 ORTHO05D006393 7.7e-21 104.4 141 48.9
CSS0014005 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 1.3e-20 103.6 145 50.3
Dinv32484 Davidia involucrata HOM05D000509 ORTHO05D006393 1.7e-20 103.2 120 52.5
Potri.016G069200 Populus trichocarpa HOM05D000509 ORTHO05D006393 2.3e-20 102.8 143 48.3
arahy.Tifrunner.gnm1.ann1.E8SAKG Arachis hypogaea HOM05D000509 ORTHO05D006393 2.5e-19 99.4 150 48.7
SGA_v2.0_scaffold95G28834 Striga asiatica HOM05D000509 ORTHO05D006393 2.5e-19 99.4 151 46.4
Glyma.18G233000 Glycine max HOM05D000509 ORTHO05D006393 5.5e-19 98.2 147 45.6
Thecc.04G199400 Theobroma cacao HOM05D000509 ORTHO05D006393 5.5e-19 98.2 140 47.9
arahy.Tifrunner.gnm1.ann1.NYL5F5 Arachis hypogaea HOM05D000509 ORTHO05D006393 9.5e-19 97.4 150 46.7
VMungo1383G0114 Vigna mungo HOM05D000509 ORTHO05D006393 2.1e-18 96.3 143 46.2
Lsat_1_v5_gn_8_97941 Lactuca sativa HOM05D002211 ORTHO05D002206 4.7e-18 95.1 116 53.4
TWI14G0500 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 4.7e-18 95.1 140 44.3
Eucgr.B00880 Eucalyptus grandis HOM05D000509 ORTHO05D006393 6.1e-18 94.7 142 45.1
Ca_07920_v3 Cicer arietinum L. HOM05D000509 ORTHO05D006393 8.0e-18 94.4 149 47.7
Phvul.008G062400 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 8.0e-18 94.4 145 44.8
Haze_15506 Corylus avellana HOM05D000509 ORTHO05D006393 1.0e-17 94.0 132 42.4
Nn6g33420 Nelumbo nucifera HOM05D000509 ORTHO05D006393 1.8e-17 93.2 131 48.9
CiPaw.02G030900 Carya illinoinensis HOM05D000509 ORTHO05D006393 2.3e-17 92.8 145 42.1
Duzib151G0093 Durio zibethinus HOM05D000509 ORTHO05D006393 3.0e-17 92.4 142 46.5
Eucgr.B00993 Eucalyptus grandis HOM05D000509 ORTHO05D006393 3.0e-17 92.4 142 44.4
Rhsim07G0117600 Rhododendron simsii HOM05D000509 ORTHO05D006393 5.2e-17 91.7 147 44.2
TAR636G2420 Trochodendron aralioides HOM05D000509 ORTHO05D006393 5.2e-17 91.7 131 51.9
CiPaw.01G061300 Carya illinoinensis HOM05D000509 ORTHO05D006393 8.9e-17 90.9 145 43.4
VMungo0540G0837 Vigna mungo HOM05D000509 ORTHO05D006393 8.9e-17 90.9 147 43.5
Cfa003925 Carpinus fangiana HOM05D000509 ORTHO05D006393 1.2e-16 90.5 130 44.6
Lalb_Chr03g0038131 Lupinus albus HOM05D000509 ORTHO05D006393 1.2e-16 90.5 138 45.7
Psat3g108360 Pisum sativum HOM05D000509 ORTHO05D006393 1.2e-16 90.5 139 46.8
Phvul.008G065500 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 1.5e-16 90.1 145 42.8
MD07G1137000 Malus domestica HOM05D000509 ORTHO05D006393 3.4e-16 89.0 147 40.8
Manes.10G122200 Manihot esculenta HOM05D000509 ORTHO05D006393 4.4e-16 88.6 146 45.2
Lj1g0015308 Lotus japonicus HOM05D000509 ORTHO05D006393 5.7e-16 88.2 145 44.8
Aqoxy2G02281 Aquilegia oxysepala HOM05D000509 ORTHO05D006393 7.5e-16 87.8 131 44.3
Medtr8g095630 Medicago truncatula HOM05D000509 ORTHO05D006393 9.8e-16 87.4 146 45.2
unitig_0.g1262 Utricularia gibba HOM05D000509 ORTHO05D006393 1.3e-15 87.0 137 43.8
Prupe.2G170600 Prunus persica HOM05D000509 ORTHO05D006393 4.9e-15 85.1 145 42.8
EL10Ac4g09051 Beta vulgaris HOM05D000509 ORTHO05D006393 8.3e-15 84.3 134 45.5
Ciclev10022504m.g Citrus clementina HOM05D000509 ORTHO05D006393 8.3e-15 84.3 122 44.3
PGR042G3203 Punica granatum HOM05D000509 ORTHO05D006393 1.1e-14 84.0 140 42.1
QL93p0259_0027 Quercus lobata HOM05D000509 ORTHO05D006393 1.4e-14 83.6 145 42.8
MBI17_g24690_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 2.4e-14 82.8 146 41.8
AUR62004883 Chenopodium quinoa HOM05D000509 ORTHO05D006393 4.1e-14 82.0 143 39.9
Medtr7g077710 Medicago truncatula HOM05D000509 ORTHO05D006393 7.0e-14 81.3 95 50.5
TWI23G0635 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 7.0e-14 81.3 143 45.5
QL01p005382 Quercus lobata HOM05D000509 ORTHO05D006393 1.2e-13 80.5 146 42.5
Rhsim07G0118400 Rhododendron simsii HOM05D000509 ORTHO05D006393 1.2e-13 80.5 123 42.3
Manes.07G019100 Manihot esculenta HOM05D000509 ORTHO05D006393 1.6e-13 80.1 147 42.9
Zm00001eb039300 Zea mays HOM05D000509 ORTHO05D006393 1.6e-13 80.1 136 39.0
Prupe.1G174800 Prunus persica HOM05D000509 ORTHO05D006393 3.5e-13 79.0 143 41.3
HanXRQChr09g0257651 Helianthus annuus HOM05D000509 ORTHO05D006393 4.5e-13 78.6 115 47.8
vmacro20943 Vaccinium macrocarpon HOM05D000509 ORTHO05D006393 4.5e-13 78.6 126 45.2
Hund14886 Selenicereus undatus HOM05D000509 ORTHO05D006393 7.8e-13 77.8 132 43.9
EL10Ac8g20190 Beta vulgaris HOM05D000509 ORTHO05D006393 1.7e-12 76.6 133 40.6
COL.COLO4_20186 Corchorus olitorius HOM05D000509 ORTHO05D006393 1.7e-12 76.6 147 42.2
MD01G1060700 Malus domestica HOM05D000509 ORTHO05D006393 2.9e-12 75.9 145 39.3
Peaxi162Scf00008g02117 Petunia axillaris HOM05D000509 ORTHO05D006393 3.8e-12 75.5 53 73.6
THA.LOC104798540 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 2.5e-11 72.8 140 41.4
DCAR_015993 Daucus carota HOM05D000509 ORTHO05D006393 5.6e-11 71.6 85 54.1
FvH4_7g14280 Fragaria vesca HOM05D000509 ORTHO05D006393 5.6e-11 71.6 145 41.4
RcHm_v2.0_Chr1g0355271 Rosa chinensis HOM05D000509 ORTHO05D006393 5.6e-11 71.6 143 41.3
Ah.04g163760 Amaranthus hybridus HOM05D000509 ORTHO05D006393 9.5e-11 70.9 131 42.0
Eucgr.L01454 Eucalyptus grandis HOM05D000509 ORTHO05D006393 1.2e-10 70.5 88 52.3
CANSAT56G2260 Cannabis sativa HOM05D000509 ORTHO05D006393 2.8e-10 69.3 138 40.6
HPP92_020794 Vanilla planifolia HOM05D000509 ORTHO05D006393 2.8e-10 69.3 134 38.8
MBI17_g24691_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 8.0e-10 67.8 128 42.2
TPR.G37720 Trifolium pratense HOM05D000509 ORTHO05D006393 1.0e-09 67.4 120 43.3
AUR62001076 Chenopodium quinoa HOM05D000509 ORTHO05D006393 1.8e-09 66.6 170 32.9
CDE09G0401 Ceratophyllum demersum HOM05D000509 ORTHO05D006393 2.3e-09 66.2 135 37.8
FAN03G2840 Fragaria x ananassa HOM05D000509 ORTHO05D006393 5.2e-09 65.1 145 39.3
FAN10G1528 Fragaria x ananassa HOM05D000509 ORTHO05D006393 6.8e-09 64.7 145 39.3
FAN10G1645 Fragaria x ananassa HOM05D000509 ORTHO05D006393 6.8e-09 64.7 145 39.3
SEGI_38599 Sequoiadendron giganteum HOM05D000509 ORTHO05D006393 1.2e-08 63.9 145 34.5
THA.LOC104820589 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 1.5e-08 63.5 144 37.5
Potri.006G202400 Populus trichocarpa HOM05D000509 ORTHO05D006393 2.0e-08 63.2 87 50.6
QL10p007195 Quercus lobata HOM05D000509 ORTHO05D006393 4.4e-08 62.0 85 48.2
C08p36230 Brassica napus HOM05D000509 ORTHO05D006393 5.8e-08 61.6 107 39.3
BolC8t51205H Brassica oleracea HOM05D000509 ORTHO05D006393 5.8e-08 61.6 107 39.3
Ah.12g064210 Amaranthus hybridus HOM05D000509 ORTHO05D006393 7.5e-08 61.2 111 37.8
A09p53420 Brassica napus HOM05D000509 ORTHO05D006393 9.8e-08 60.8 93 38.7
BraA09t40768Z Brassica rapa HOM05D000509 ORTHO05D006393 9.8e-08 60.8 93 38.7
Migut.B01755 Erythranthe guttata HOM05D000509 ORTHO05D006393 1.3e-07 60.5 152 36.2
QL08p048801 Quercus lobata HOM05D000509 ORTHO05D006393 1.3e-07 60.5 122 43.4
FAN06G1484 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.7e-07 60.1 132 41.7
FAN06G3105 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.7e-07 60.1 132 41.7
Os08g0559700 Oryza sativa ssp. japonica HOM05D000509 ORTHO05D006393 2.9e-07 59.3 129 34.9
GSVIVG01003391001 Vitis vinifera HOM05D000509 ORTHO05D006393 3.7e-07 58.9 112 42.0
Aa31LG1G27330 Aethionema arabicum HOM05D000509 ORTHO05D006393 8.3e-07 57.8 94 41.5
PSO478G1119 Papaver somniferum HOM05D000509 ORTHO05D006393 8.3e-07 57.8 90 41.1
Glyma.09G259300 Glycine max HOM05D000509 ORTHO05D006393 1.1e-06 57.4 76 47.4
PSO782G0796 Papaver somniferum HOM05D000509 ORTHO05D006393 1.4e-06 57.0 142 35.2
FAN01G0359 Fragaria x ananassa HOM05D000509 ORTHO05D006393 4.1e-06 55.5 145 35.9


User provided reference genes

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