Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 3.6e-77 291.6 156 100.0
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 1.3e-74 283.1 156 96.8
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 7.8e-64 247.3 156 85.3
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 1.0e-63 246.9 156 85.3
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 6.6e-63 244.2 156 85.3
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 1.5e-62 243.0 152 85.5
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 2.0e-43 179.5 153 66.7
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 3.8e-42 175.3 153 64.7
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 1.6e-40 169.9 149 63.8
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 2.1e-40 169.5 149 64.4
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 7.9e-40 167.5 157 61.8
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 1.8e-39 166.4 127 70.1
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 2.3e-39 166.0 154 63.0
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 3.9e-39 165.2 122 71.3
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 3.9e-39 165.2 153 63.4
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 1.5e-38 163.3 150 60.0
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 1.9e-38 162.9 154 63.0
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 2.5e-38 162.5 116 73.3
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.3e-37 160.2 153 62.1
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 4.5e-35 151.8 160 61.2
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 7.7e-35 151.0 157 62.4
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 1.7e-34 149.8 156 60.9
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 1.4e-33 146.7 152 60.5
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 4.2e-33 145.2 84 88.1
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 5.5e-33 144.8 129 67.4
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 2.7e-32 142.5 121 65.3
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 6.1e-32 141.4 122 64.8
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 6.1e-32 141.4 124 64.5
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 7.9e-32 141.0 120 65.8
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 2.3e-31 139.4 151 57.6
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 5.1e-31 138.3 152 57.9
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 6.7e-31 137.9 149 59.1
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 6.7e-31 137.9 131 61.1
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 6.7e-31 137.9 149 56.4
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 8.8e-31 137.5 151 58.3
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 1.1e-30 137.1 149 58.4
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 1.5e-30 136.7 151 58.9
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 2.5e-30 136.0 155 53.5
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 3.3e-30 135.6 126 59.5
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 3.3e-30 135.6 120 64.2
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 1.7e-29 133.3 161 54.0
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 2.8e-29 132.5 134 57.5
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 2.8e-29 132.5 151 56.3
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 2.8e-29 132.5 111 66.7
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 3.7e-29 132.1 153 56.9
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 4.8e-29 131.7 111 67.6
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 6.3e-29 131.3 148 53.4
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 6.3e-29 131.3 154 53.9
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 8.2e-29 131.0 134 56.7
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 1.4e-28 130.2 148 56.1
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 1.4e-28 130.2 126 60.3
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.4e-28 130.2 149 55.7
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 1.8e-28 129.8 149 52.3
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 1.8e-28 129.8 152 55.3
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 2.4e-28 129.4 152 55.9
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 2.4e-28 129.4 148 55.4
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 3.1e-28 129.0 121 60.3
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 3.1e-28 129.0 152 52.0
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 3.1e-28 129.0 124 61.3
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 4.1e-28 128.6 153 55.6
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 5.3e-28 128.3 124 62.1
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 6.9e-28 127.9 149 52.3
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 6.9e-28 127.9 149 55.7
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 9.1e-28 127.5 124 62.1
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 1.2e-27 127.1 146 55.5
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 1.5e-27 126.7 149 51.7
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 1.5e-27 126.7 149 52.3
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 1.5e-27 126.7 153 54.9
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 2.0e-27 126.3 152 55.3
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 2.0e-27 126.3 152 55.3
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 2.0e-27 126.3 153 54.9
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 2.6e-27 125.9 149 54.4
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 4.5e-27 125.2 152 57.2
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 7.7e-27 124.4 121 60.3
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 7.7e-27 124.4 110 66.4
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 7.7e-27 124.4 150 56.0
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 7.7e-27 124.4 148 54.7
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.0e-26 124.0 145 53.8
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 1.0e-26 124.0 125 61.6
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 1.0e-26 124.0 148 52.7
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 1.3e-26 123.6 145 51.0
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 1.3e-26 123.6 145 51.0
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 1.7e-26 123.2 147 51.7
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 1.7e-26 123.2 123 60.2
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 2.2e-26 122.9 146 52.1
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 2.2e-26 122.9 147 51.7
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 2.2e-26 122.9 146 52.1
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 2.2e-26 122.9 150 54.0
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 3.8e-26 122.1 91 73.6
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 5.0e-26 121.7 153 54.2
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 5.0e-26 121.7 150 51.3
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 6.5e-26 121.3 146 52.1
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 8.5e-26 120.9 122 60.7
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 8.5e-26 120.9 89 71.9
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 8.5e-26 120.9 155 51.6
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 1.1e-25 120.6 146 51.4
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 1.4e-25 120.2 154 52.6
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 1.9e-25 119.8 111 64.9
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 4.2e-25 118.6 151 53.6
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 4.2e-25 118.6 151 53.6
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 2.1e-24 116.3 150 54.0
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 3.6e-24 115.5 126 54.0
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 4.7e-24 115.2 156 50.0
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 5.1e-23 111.7 148 53.4
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 6.7e-23 111.3 78 76.9
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 8.2e-21 104.4 64 82.8
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 1.1e-20 104.0 66 83.3
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 1.1e-20 104.0 66 83.3
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 3.1e-20 102.4 223 39.0
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 3.1e-20 102.4 143 50.3
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 4.1e-20 102.1 83 67.5
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 5.0e-18 95.1 85 61.2
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 6.5e-18 94.7 80 62.5
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 2.5e-17 92.8 110 51.8
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 4.2e-17 92.0 89 59.6
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 7.2e-17 91.3 93 54.8
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 2.1e-16 89.7 131 48.1
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 3.6e-16 89.0 147 42.9
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 1.4e-15 87.0 69 63.8
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 5.2e-15 85.1 113 54.9
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 1.6e-11 73.6 61 62.3
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 1.9e-09 66.6 89 48.3
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 1.0e-07 60.8 83 45.8
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 8.8e-07 57.8 61 47.5


User provided reference genes

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