Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 5.3e-74 281.2 168 100.0
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 1.1e-68 263.5 168 94.6
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 6.3e-59 231.1 174 81.6
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 4.1e-58 228.4 171 81.9
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 2.0e-57 226.1 171 83.6
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 2.9e-56 222.2 171 80.7
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 2.5e-55 219.2 173 75.1
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 2.8e-43 179.1 160 76.9
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 4.5e-33 145.2 168 59.5
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 1.7e-32 143.3 167 58.1
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 1.7e-32 143.3 172 52.9
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 2.7e-30 136.0 153 62.7
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 1.8e-29 133.3 160 56.9
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 2.0e-28 129.8 151 58.3
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 7.5e-28 127.9 171 53.2
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 8.3e-27 124.4 156 56.4
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 1.4e-26 123.6 150 58.7
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 2.4e-26 122.9 162 54.9
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 3.1e-26 122.5 143 60.8
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 4.1e-26 122.1 163 52.1
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 2.7e-25 119.4 150 56.7
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 2.7e-25 119.4 101 73.3
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 3.5e-25 119.0 153 57.5
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 7.7e-25 117.9 145 51.0
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 7.7e-25 117.9 147 57.1
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 1.0e-24 117.5 137 63.5
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 3.8e-24 115.5 145 55.2
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 3.8e-24 115.5 175 46.9
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 5.0e-24 115.2 155 55.5
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 8.5e-24 114.4 133 57.9
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 1.5e-23 113.6 160 50.0
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 1.5e-23 113.6 150 60.0
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 2.5e-23 112.8 105 64.8
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 2.5e-23 112.8 167 50.9
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 3.2e-23 112.5 98 75.5
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 4.2e-23 112.1 150 54.7
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 5.5e-23 111.7 151 53.0
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 5.5e-23 111.7 133 58.6
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 5.5e-23 111.7 155 56.1
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 7.2e-23 111.3 99 70.7
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 9.4e-23 110.9 99 75.8
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 9.4e-23 110.9 99 75.8
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 9.4e-23 110.9 95 71.6
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 1.2e-22 110.5 150 54.0
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 2.7e-22 109.4 167 47.9
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 6.1e-22 108.2 151 57.6
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 1.0e-21 107.5 141 55.3
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 1.4e-21 107.1 92 75.0
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 1.8e-21 106.7 99 75.8
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.8e-21 106.7 151 57.0
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.8e-21 106.7 151 57.0
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 1.8e-21 106.7 165 53.9
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 1.8e-21 106.7 102 76.5
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 2.3e-21 106.3 150 57.3
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 3.0e-21 105.9 138 55.1
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 4.0e-21 105.5 144 54.2
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 8.8e-21 104.4 138 53.6
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 2.0e-20 103.2 150 57.3
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 4.4e-20 102.1 98 67.3
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 5.7e-20 101.7 162 48.1
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 5.7e-20 101.7 138 54.3
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 7.5e-20 101.3 95 69.5
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 7.5e-20 101.3 113 62.8
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 9.8e-20 100.9 94 70.2
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 9.8e-20 100.9 94 70.2
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 9.8e-20 100.9 94 70.2
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 9.8e-20 100.9 95 69.5
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 1.3e-19 100.5 92 71.7
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 1.3e-19 100.5 135 53.3
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 1.7e-19 100.1 92 70.7
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 2.8e-19 99.4 95 68.4
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 2.8e-19 99.4 132 54.5
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 3.7e-19 99.0 150 48.7
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 3.7e-19 99.0 152 52.0
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 4.9e-19 98.6 137 50.4
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 6.3e-19 98.2 91 72.5
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 8.3e-19 97.8 135 52.6
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 8.3e-19 97.8 152 50.0
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 2.4e-18 96.3 101 65.3
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 2.4e-18 96.3 128 57.8
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 7.0e-18 94.7 121 57.9
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 9.2e-18 94.4 133 54.1
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 1.2e-17 94.0 80 75.0
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 2.0e-17 93.2 154 49.4
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 2.7e-17 92.8 94 68.1
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 3.5e-17 92.4 121 57.0
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 5.9e-17 91.7 80 73.8
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 1.0e-16 90.9 80 72.5
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 5.0e-16 88.6 90 70.0
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 8.6e-16 87.8 91 68.1
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 1.1e-15 87.4 82 76.8
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 3.3e-15 85.9 89 66.3
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 4.3e-15 85.5 125 55.2
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 2.8e-14 82.8 139 50.4
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 8.0e-14 81.3 85 65.9
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 1.8e-13 80.1 94 56.4
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 2.3e-13 79.7 139 48.9
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 2.3e-13 79.7 96 61.5
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 1.2e-12 77.4 95 51.6
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 5.7e-12 75.1 113 54.0
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 2.2e-11 73.2 81 64.2
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 7.0e-10 68.2 179 38.5
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 4.6e-09 65.5 105 51.4


User provided reference genes

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