Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006710g0010 Nicotiana tabacum HOM05D007101 ORTHO05D008632 2.4e-196 689.9 832 100.0
Nitab4.5_0000526g0060 Nicotiana tabacum HOM05D007101 ORTHO05D008632 1.2e-187 661.0 831 98.3
Peaxi162Scf00818g00019 Petunia axillaris HOM05D007101 ORTHO05D008632 3.1e-135 486.9 835 88.0
CAN.G157.9 Capsicum annuum HOM05D007101 ORTHO05D008632 3.6e-123 446.8 832 85.5
Solyc02g021020.4 Solanum lycopersicum HOM05D007101 ORTHO05D008632 1.8e-114 417.9 819 80.8
PGSC0003DMG400019836 Solanum tuberosum HOM05D007101 ORTHO05D008632 1.2e-86 325.5 343 88.9
CSS0049741 Camellia sinensis var. sinensis HOM05D007101 ORTHO05D008632 7.8e-86 322.8 836 75.8
Sopen02g005320 Solanum pennellii HOM05D007101 ORTHO05D008632 3.0e-85 320.9 343 88.6
CiPaw.06G116300 Carya illinoinensis HOM05D007101 ORTHO05D008632 4.2e-79 300.4 835 76.8
COL.COLO4_17930 Corchorus olitorius HOM05D007101 ORTHO05D008632 1.6e-75 288.5 827 73.0
Duzib132G1059 Durio zibethinus HOM05D007101 ORTHO05D008632 8.1e-75 286.2 830 75.3
Rhsim01G0003500 Rhododendron simsii HOM05D007101 ORTHO05D008632 1.0e-69 269.2 834 75.4
SGA_v2.0_scaffold32G13346 Striga asiatica HOM05D007101 ORTHO05D008632 1.0e-69 269.2 831 74.5
SalBow1G7566 Salvia bowleyana HOM05D007101 ORTHO05D008632 1.8e-69 268.5 833 71.8
Dinv41876 Davidia involucrata HOM05D007101 ORTHO05D008632 3.0e-69 267.7 836 63.6
vmacro02332 Vaccinium macrocarpon HOM05D007101 ORTHO05D008632 8.1e-67 259.6 837 72.4
TAR376G1071 Trochodendron aralioides HOM05D007101 ORTHO05D008632 2.0e-65 255.0 832 71.4
Cpa.g.sc20.207 Carica papaya HOM05D007101 ORTHO05D008632 7.6e-65 253.1 832 70.6
TWI15G0633 Tripterygium wilfordii HOM05D007101 ORTHO05D008632 1.0e-64 252.7 834 71.2
Migut.B00010 Erythranthe guttata HOM05D007101 ORTHO05D008632 2.9e-64 251.1 834 74.3
Actinidia17999 Actinidia chinensis HOM05D007101 ORTHO05D008632 3.8e-64 250.8 834 72.8
GSVIVG01023885001 Vitis vinifera HOM05D007101 ORTHO05D008632 1.9e-63 248.4 839 73.1
ClCG02G003480 Citrullus lanatus HOM05D007101 ORTHO05D008632 4.6e-62 243.8 833 73.5
Prupe.8G178500 Prunus persica HOM05D007101 ORTHO05D008632 4.6e-62 243.8 834 74.3
Manes.11G110800 Manihot esculenta HOM05D007101 ORTHO05D008632 1.3e-61 242.3 836 72.6
RcHm_v2.0_Chr6g0280761 Rosa chinensis HOM05D007101 ORTHO05D008632 1.8e-61 241.9 834 67.7
QL11p055950 Quercus lobata HOM05D007101 ORTHO05D008632 8.7e-61 239.6 837 74.0
MELO3C013256.2 Cucumis melo HOM05D007101 ORTHO05D008632 5.7e-60 236.9 840 69.0
Sed0027220 Sechium edule HOM05D007101 ORTHO05D008632 2.8e-59 234.6 840 66.8
Haze_02013 Corylus avellana HOM05D007101 ORTHO05D008632 3.7e-59 234.2 838 72.9
CsaV3_7G001820 Cucumis sativus L. HOM05D007101 ORTHO05D008632 1.8e-58 231.9 833 69.4
FvH4_2g16640 Fragaria vesca HOM05D007101 ORTHO05D008632 3.1e-58 231.1 832 73.2
Thecc.02G044400 Theobroma cacao HOM05D007101 ORTHO05D008632 4.1e-58 230.7 830 72.9
Cfa005353 Carpinus fangiana HOM05D007101 ORTHO05D008632 5.3e-58 230.3 840 66.7
FAN15G1235 Fragaria x ananassa HOM05D007101 ORTHO05D008632 9.0e-58 229.6 828 73.2
Sc14g0002450 Simmondsia chinensis HOM05D007101 ORTHO05D008632 9.0e-58 229.6 838 70.3
Gorai.012G159300 Gossypium raimondii HOM05D007101 ORTHO05D008632 2.0e-57 228.4 830 73.4
Gohir.D04G170700 Gossypium hirsutum HOM05D007101 ORTHO05D008632 3.4e-57 227.6 830 73.4
Potri.004G205600 Populus trichocarpa HOM05D007101 ORTHO05D008632 4.5e-57 227.3 342 73.1
THA.LOC104819686 Tarenaya hassleriana HOM05D007101 ORTHO05D008632 7.6e-57 226.5 835 72.0
MD10G1139700 Malus domestica HOM05D007101 ORTHO05D008632 1.0e-56 226.1 344 75.6
Gohir.A04G125700 Gossypium hirsutum HOM05D007101 ORTHO05D008632 1.3e-56 225.7 830 73.1
Sabra04G0138800 Salix brachista HOM05D007101 ORTHO05D008632 2.2e-56 224.9 344 72.1
Oeu059796.1 Olea europaea HOM05D007101 ORTHO05D008632 3.8e-56 224.2 843 73.9
Ciclev10027787m.g Citrus clementina HOM05D007101 ORTHO05D008632 8.4e-56 223.0 829 70.6
Cc03_g11620 Coffea canephora HOM05D007101 ORTHO05D008632 2.5e-55 221.5 352 67.0
Lalb_Chr05g0218081 Lupinus albus HOM05D007101 ORTHO05D008632 7.2e-55 219.9 830 64.1
Aqoxy6G01656 Aquilegia oxysepala HOM05D007101 ORTHO05D008632 1.8e-53 215.3 836 68.3
C07p06350 Brassica napus HOM05D007101 ORTHO05D008632 1.4e-50 205.7 339 69.6
BcaB03g16462 Brassica carinata HOM05D007101 ORTHO05D008632 4.1e-50 204.1 339 71.1
Lj4g0005302 Lotus japonicus HOM05D007101 ORTHO05D008632 5.3e-50 203.8 836 64.1
Thhalv10022542m.g Eutrema salsugineum HOM05D007101 ORTHO05D008632 2.6e-49 201.4 339 68.4
VMungo0251G0107 Vigna mungo HOM05D007101 ORTHO05D008632 3.4e-49 201.1 847 57.7
DCAR_015659 Daucus carota HOM05D000046 ORTHO05D008632 8.5e-48 196.4 837 70.7
PGR142G0716 Punica granatum HOM05D007101 ORTHO05D008632 4.2e-47 194.1 837 68.3
AL3G49990 Arabidopsis lyrata HOM05D007101 ORTHO05D008632 1.2e-46 192.6 339 67.6
CARHR293460 Cardamine hirsuta HOM05D007101 ORTHO05D008632 1.2e-46 192.6 339 69.3
Aa31LG8G14540 Aethionema arabicum HOM05D007101 ORTHO05D008632 1.6e-46 192.2 339 67.6
MSTRG.17820 Avicennia marina HOM05D007101 ORTHO05D008632 1.6e-46 192.2 832 71.6
Hund06163 Selenicereus undatus HOM05D007101 ORTHO05D008632 2.7e-46 191.4 835 70.4
BcaC06g36224 Brassica carinata HOM05D007101 ORTHO05D008632 1.8e-45 188.7 339 67.6
A07p03990 Brassica napus HOM05D007101 ORTHO05D008632 1.8e-45 188.7 339 67.6
BolC7t41051H Brassica oleracea HOM05D007101 ORTHO05D008632 1.8e-45 188.7 339 67.6
BraA07t28190Z Brassica rapa HOM05D007101 ORTHO05D008632 1.8e-45 188.7 339 67.6
TAR629G2938 Trochodendron aralioides HOM05D007101 ORTHO05D008632 3.9e-45 187.6 157 58.6
Eucgr.I01520 Eucalyptus grandis HOM05D007101 ORTHO05D008632 8.8e-45 186.4 834 68.6
Atru.chr5.3546 Acer truncatum HOM05D007101 ORTHO05D008632 2.5e-44 184.9 779 73.7
AUR62027126 Chenopodium quinoa HOM05D007101 ORTHO05D008632 2.5e-44 184.9 780 73.2
Glyma.08G060600 Glycine max HOM05D007101 ORTHO05D008632 3.3e-44 184.5 837 59.7
Lj9A406T59 Lonicera japonica HOM05D007101 ORTHO05D008632 1.3e-43 182.6 831 71.5
arahy.Tifrunner.gnm1.ann1.RGU3X9 Arachis hypogaea HOM05D007101 ORTHO05D008632 6.3e-43 180.3 839 60.8
Rhsim11G0197400 Rhododendron simsii HOM05D007101 ORTHO05D008632 8.2e-43 179.9 780 60.6
Phvul.002G220400 Phaseolus vulgaris HOM05D007101 ORTHO05D008632 1.4e-42 179.1 848 58.1
ECA233G4336 Erigeron canadensis HOM05D000046 ORTHO05D014757 4.1e-42 177.6 343 68.8
arahy.Tifrunner.gnm1.ann1.RR3D2P Arachis hypogaea HOM05D007101 ORTHO05D008632 6.9e-42 176.8 839 64.7
Ca_18469_v3 Cicer arietinum L. HOM05D007101 ORTHO05D008632 9.1e-42 176.4 832 62.0
Ca_30070_v3 Cicer arietinum L. HOM05D007101 ORTHO05D008632 9.1e-42 176.4 832 62.0
AUR62012916 Chenopodium quinoa HOM05D007101 ORTHO05D008632 1.2e-41 176.0 780 71.4
EL10Ac9g21242 Beta vulgaris HOM05D007101 ORTHO05D008632 2.6e-41 174.9 342 70.8
Ah.01g023750 Amaranthus hybridus HOM05D000564 ORTHO05D002780 5.9e-41 173.7 817 66.6
arahy.Tifrunner.gnm1.ann1.X169V3 Arachis hypogaea HOM05D007101 ORTHO05D008632 5.9e-41 173.7 343 65.9
AT2G17140 Arabidopsis thaliana HOM05D007101 ORTHO05D008632 5.0e-40 170.6 339 66.7
TPR.G15380 Trifolium pratense HOM05D007101 ORTHO05D008632 3.2e-39 167.9 833 61.0
HanXRQChr12g0374451 Helianthus annuus HOM05D007101 ORTHO05D008632 1.1e-34 152.9 838 66.1
Os02g0132100 Oryza sativa ssp. japonica HOM05D007101 ORTHO05D008632 2.6e-33 148.3 343 63.8
Lsat_1_v5_gn_8_121281 Lactuca sativa HOM05D007101 ORTHO05D008632 2.5e-31 141.7 177 46.3
SHI10554 Sapria himalayana HOM05D007101 ORTHO05D008632 1.4e-29 136.0 829 63.8
CDE04G2490 Ceratophyllum demersum HOM05D007101 ORTHO05D008632 8.8e-29 133.3 174 44.3
Zm00001eb209030 Zea mays HOM05D007101 ORTHO05D008632 5.7e-28 130.6 342 62.6
Carub.0003s3107 Capsella rubella HOM05D007101 ORTHO05D008632 1.4e-26 125.9 339 61.7
PSO675G0367 Papaver somniferum HOM05D007101 ORTHO05D008632 9.1e-26 123.2 342 62.9
TAR629G1847 Trochodendron aralioides HOM05D007101 ORTHO05D008632 5.9e-25 120.6 184 45.1
unitig_32.g11014 Utricularia gibba HOM05D007101 ORTHO05D008632 2.5e-23 115.2 154 41.6
FAN24G2347 Fragaria x ananassa HOM05D007101 ORTHO05D008632 3.2e-23 114.8 140 49.3
Nn1g05331 Nelumbo nucifera HOM05D007101 ORTHO05D008632 3.6e-22 111.3 348 60.3
MBI06_g35039_MAGBIO Magnolia biondii HOM05D007101 ORTHO05D008632 1.4e-21 109.4 145 44.8
Gorai.008G096400 Gossypium raimondii HOM05D007101 ORTHO05D008632 7.5e-20 103.6 144 41.0
Sp3g30480 Schrenkiella parvula HOM05D007101 ORTHO05D008632 2.8e-19 101.7 149 39.6
Medtr4g091600 Medicago truncatula HOM05D007101 ORTHO05D008632 8.3e-19 100.1 155 36.1
MD05G1134600 Malus domestica HOM05D007101 ORTHO05D008632 5.9e-17 94.0 63 63.5
Glyma.07G188700 Glycine max HOM05D007101 ORTHO05D008632 8.5e-16 90.1 179 34.1
HPP92_025842 Vanilla planifolia HOM05D007101 ORTHO05D008632 4.0e-13 81.3 161 31.7
MD05G1134700 Malus domestica HOM05D007101 ORTHO05D008632 1.2e-12 79.7 109 45.9
ATR0618G240 Amborella trichopoda HOM05D007101 ORTHO05D008632 4.4e-12 77.8 61 55.7
THA.LOC104807397 Tarenaya hassleriana HOM05D007101 ORTHO05D008632 5.7e-12 77.4 125 41.6
MSTRG.8165 Avicennia marina HOM05D005287 ORTHO05D006893 1.2e-06 59.7 143 32.2
Gohir.D06G112750 Gossypium hirsutum HOM05D007101 ORTHO05D019476 2.8e-06 58.5 61 47.5
VMungo0251G1721 Vigna mungo HOM05D007101 ORTHO05D008632 4.7e-06 57.8 62 46.8
SEGI_28621 Sequoiadendron giganteum HOM05D007101 ORTHO05D008632 6.1e-06 57.4 145 26.9


User provided reference genes

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