Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006705g0010 Nicotiana tabacum HOM05D007785 ORTHO05D008997 5.2e-75 284.3 141 100.0
Nitab4.5_0000166g0090 Nicotiana tabacum HOM05D007785 ORTHO05D008997 7.9e-39 164.1 90 93.3
Peaxi162Scf00901g00032 Petunia axillaris HOM05D007785 ORTHO05D008997 4.8e-28 128.3 81 82.7
Solyc01g080890.2 Solanum lycopersicum HOM05D007785 ORTHO05D008997 1.4e-19 100.1 82 74.4
Peaxi162Scf01144g00004 Petunia axillaris HOM05D007785 ORTHO05D008997 6.9e-19 97.8 75 70.7
Sopen01g032480 Solanum pennellii HOM05D007785 ORTHO05D008997 9.1e-19 97.4 82 73.2
Nitab4.5_0001476g0130 Nicotiana tabacum HOM05D007785 ORTHO05D008997 7.7e-18 94.4 75 70.7
Nitab4.5_0003887g0040 Nicotiana tabacum HOM05D007785 ORTHO05D008997 1.7e-17 93.2 69 75.4
PGSC0003DMG400001700 Solanum tuberosum HOM05D007785 ORTHO05D008997 1.1e-16 90.5 82 69.5
Dinv43998 Davidia involucrata HOM05D007785 ORTHO05D008997 1.1e-13 80.5 78 53.8
Cc02_g26020 Coffea canephora HOM05D007785 ORTHO05D008997 2.0e-13 79.7 73 63.0
CSS0006779 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 2.6e-13 79.3 73 57.5
Atru.chr5.15 Acer truncatum HOM05D007785 ORTHO05D008997 4.8e-12 75.1 79 51.9
Hma1.2p1_0601F.1_g187290 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 1.1e-11 73.9 73 61.6
Actinidia05806 Actinidia chinensis HOM05D007785 ORTHO05D008997 1.8e-11 73.2 73 58.9
Hma1.2p1_0021F.1_g014470 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 4.1e-11 72.0 87 55.2
ECA234G3743 Erigeron canadensis HOM05D007785 ORTHO05D008997 9.1e-11 70.9 71 57.7
MD02G1229100 Malus domestica HOM05D007785 ORTHO05D008997 4.5e-10 68.6 71 57.7
Oeu021958.1 Olea europaea HOM05D007785 ORTHO05D008997 5.9e-10 68.2 74 54.1
Rhsim01G0145700 Rhododendron simsii HOM05D007785 ORTHO05D008997 1.0e-09 67.4 82 54.9
Migut.B01462 Erythranthe guttata HOM05D007785 ORTHO05D008997 1.3e-09 67.0 75 56.0
MSTRG.17094 Avicennia marina HOM05D007785 ORTHO05D008997 2.2e-09 66.2 66 59.1
Lalb_Chr09g0329531 Lupinus albus HOM05D007785 ORTHO05D008997 2.9e-09 65.9 74 55.4
QL04p025073 Quercus lobata HOM05D007785 ORTHO05D008997 3.8e-09 65.5 75 49.3
TAR375G1071 Trochodendron aralioides HOM05D007785 ORTHO05D008997 3.8e-09 65.5 78 50.0
MD07G1083000 Malus domestica HOM05D007785 ORTHO05D008997 5.0e-09 65.1 71 56.3
FvH4_7g07910 Fragaria vesca HOM05D007785 ORTHO05D008997 8.5e-09 64.3 71 59.2
FAN06G1471 Fragaria x ananassa HOM05D007785 ORTHO05D008997 8.5e-09 64.3 71 59.2
FAN10G3075 Fragaria x ananassa HOM05D007785 ORTHO05D008997 8.5e-09 64.3 71 59.2
RcHm_v2.0_Chr1g0341401 Rosa chinensis HOM05D007785 ORTHO05D008997 1.1e-08 63.9 71 57.7
Lalb_Chr05g0214041 Lupinus albus HOM05D007785 ORTHO05D008997 1.9e-08 63.2 74 56.8
Gohir.A13G011800 Gossypium hirsutum HOM05D007785 ORTHO05D008997 3.2e-08 62.4 112 40.2
HanXRQChr16g0520951 Helianthus annuus HOM05D007785 ORTHO05D008997 4.2e-08 62.0 74 52.7
SalBow5G3019 Salvia bowleyana HOM05D007785 ORTHO05D008997 4.2e-08 62.0 75 52.0
FAN03G1138 Fragaria x ananassa HOM05D007785 ORTHO05D008997 5.5e-08 61.6 66 60.6
Prupe.2G109900 Prunus persica HOM05D007785 ORTHO05D008997 5.5e-08 61.6 90 43.3
TAR636G3686 Trochodendron aralioides HOM05D007785 ORTHO05D008997 5.5e-08 61.6 73 47.9
CiPaw.13G020000 Carya illinoinensis HOM05D007785 ORTHO05D008997 7.2e-08 61.2 85 48.2
Nn1g00585 Nelumbo nucifera HOM05D007785 ORTHO05D008997 7.2e-08 61.2 73 52.1
CSS0013282 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 9.4e-08 60.8 73 53.4
Migut.N01702 Erythranthe guttata HOM05D007785 ORTHO05D008997 1.2e-07 60.5 73 47.9
Nn6g33639 Nelumbo nucifera HOM05D007785 ORTHO05D008997 1.2e-07 60.5 86 41.9
FAN01G0084 Fragaria x ananassa HOM05D007785 ORTHO05D008997 1.6e-07 60.1 71 56.3
Sabra01G0113200 Salix brachista HOM05D007785 ORTHO05D008997 1.6e-07 60.1 95 41.1
Thecc.03G232200 Theobroma cacao HOM05D012518 ORTHO05D008997 1.6e-07 60.1 74 51.4
Aqoxy3G02467 Aquilegia oxysepala HOM05D007785 ORTHO05D008997 4.7e-07 58.5 76 47.4
ClCG05G002700 Citrullus lanatus HOM05D007785 ORTHO05D008997 4.7e-07 58.5 102 43.1
DCAR_025013 Daucus carota HOM05D007785 ORTHO05D008997 4.7e-07 58.5 71 50.7
TAR374G0344 Trochodendron aralioides HOM05D007785 ORTHO05D008997 4.7e-07 58.5 78 46.2
Sed0022240 Sechium edule HOM05D007785 ORTHO05D008997 6.1e-07 58.2 93 48.4
SalBow4G1855 Salvia bowleyana HOM05D007785 ORTHO05D008997 8.0e-07 57.8 75 48.0
Manes.15G169900 Manihot esculenta HOM05D007785 ORTHO05D008997 1.0e-06 57.4 71 53.5
COL.COLO4_17092 Corchorus olitorius HOM05D012518 ORTHO05D008997 1.8e-06 56.6 74 48.6
Oeu024374.1 Olea europaea HOM05D007785 ORTHO05D008997 1.8e-06 56.6 81 45.7
VMungo0251G2587 Vigna mungo HOM05D007785 ORTHO05D008997 1.8e-06 56.6 75 53.3
Gohir.D13G012700 Gossypium hirsutum HOM05D007785 ORTHO05D008997 2.3e-06 56.2 73 47.9
Gorai.013G013800 Gossypium raimondii HOM05D007785 ORTHO05D008997 2.3e-06 56.2 73 47.9
Glyma.17G153500 Glycine max HOM05D007785 ORTHO05D008997 5.2e-06 55.1 74 54.1
HanXRQChr16g0519261 Helianthus annuus HOM05D007785 ORTHO05D008997 5.2e-06 55.1 78 44.9
Potri.001G145066 Populus trichocarpa HOM05D007785 ORTHO05D008997 5.2e-06 55.1 71 47.9
Sp1g28440 Schrenkiella parvula HOM05D010231 ORTHO05D012284 5.2e-06 55.1 69 50.7
Lj4g0027032 Lotus japonicus HOM05D007785 ORTHO05D008997 6.7e-06 54.7 74 51.4
Glyma.05G113700 Glycine max HOM05D007785 ORTHO05D008997 8.8e-06 54.3 74 52.7
vmacro21104 Vaccinium macrocarpon HOM05D008336 ORTHO05D008997 8.8e-06 54.3 94 43.6


User provided reference genes

Program Settings