Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 9.8e-55 216.5 103 100.0
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 2.9e-51 204.9 103 93.2
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 5.0e-51 204.1 103 92.2
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 5.0e-51 204.1 103 92.2
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 6.6e-51 203.8 103 95.1
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 2.5e-50 201.8 103 91.3
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 3.7e-38 161.4 103 75.7
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 1.1e-37 159.8 100 83.0
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 5.4e-37 157.5 105 75.2
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 7.0e-37 157.1 105 74.3
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 4.6e-36 154.5 105 73.3
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 4.6e-36 154.5 105 74.3
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 1.3e-35 152.9 104 75.0
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 2.3e-35 152.1 108 72.2
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 2.3e-35 152.1 108 72.2
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 2.3e-35 152.1 108 72.2
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 3.0e-35 151.8 112 70.5
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 6.6e-35 150.6 103 74.8
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 3.3e-34 148.3 103 72.8
Cc00_g31810 Coffea canephora HOM05D006197 ORTHO05D007718 3.1e-32 141.7 87 79.3
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 4.0e-32 141.4 109 68.8
HanXRQChr08g0234831 Helianthus annuus HOM05D006197 ORTHO05D007718 4.0e-32 141.4 108 67.6
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 4.0e-32 141.4 105 65.7
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 6.8e-32 140.6 103 69.9
ECA240G0414 Erigeron canadensis HOM05D006197 ORTHO05D007718 1.2e-31 139.8 111 68.5
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 1.2e-31 139.8 99 67.7
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 1.5e-31 139.4 108 69.4
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 2.6e-31 138.7 104 69.2
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 2.6e-31 138.7 103 66.0
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 4.4e-31 137.9 104 70.2
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 5.8e-31 137.5 104 69.2
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 7.5e-31 137.1 98 69.4
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 1.7e-30 136.0 107 64.5
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 1.7e-30 136.0 101 64.4
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 2.2e-30 135.6 107 64.5
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 2.2e-30 135.6 107 64.5
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 2.2e-30 135.6 105 70.5
PGR042G3581 Punica granatum HOM05D006197 ORTHO05D007718 4.9e-30 134.4 105 64.8
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 8.3e-30 133.7 103 65.0
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 1.1e-29 133.3 107 64.5
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.1e-29 133.3 104 69.2
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 1.4e-29 132.9 105 69.5
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.4e-29 132.9 101 68.3
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 1.9e-29 132.5 100 64.0
AL5G41940 Arabidopsis lyrata HOM05D006197 ORTHO05D007718 2.4e-29 132.1 103 65.0
AT3G59840 Arabidopsis thaliana HOM05D006197 ORTHO05D007718 2.4e-29 132.1 103 65.0
Carub.0005s2656 Capsella rubella HOM05D006197 ORTHO05D007718 2.4e-29 132.1 103 65.0
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 3.2e-29 131.7 104 65.4
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 4.1e-29 131.3 103 65.0
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 5.4e-29 131.0 103 64.1
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 5.4e-29 131.0 103 63.1
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 9.2e-29 130.2 103 63.1
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 9.2e-29 130.2 106 62.3
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 1.2e-28 129.8 103 68.0
Cc08_g01990 Coffea canephora HOM05D006197 ORTHO05D007718 1.6e-28 129.4 67 89.6
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 1.6e-28 129.4 105 64.8
CsaV3_3G049530 Cucumis sativus L. HOM05D006197 ORTHO05D007718 2.1e-28 129.0 103 59.2
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 2.7e-28 128.6 104 63.5
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 2.7e-28 128.6 103 65.0
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 2.7e-28 128.6 103 64.1
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 2.7e-28 128.6 105 63.8
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 3.5e-28 128.3 103 62.1
Gohir.D08G180000 Gossypium hirsutum HOM05D006197 ORTHO05D007718 3.5e-28 128.3 103 65.0
Gorai.004G188500 Gossypium raimondii HOM05D006197 ORTHO05D007718 3.5e-28 128.3 103 65.0
Oeu006551.1 Olea europaea HOM05D006197 ORTHO05D007718 3.5e-28 128.3 110 63.6
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 4.6e-28 127.9 104 62.5
Sp5g03300 Schrenkiella parvula HOM05D006197 ORTHO05D007718 4.6e-28 127.9 103 64.1
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 1.0e-27 126.7 111 58.6
Gohir.A08G159600 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.0e-27 126.7 103 64.1
Thecc.03G234100 Theobroma cacao HOM05D006197 ORTHO05D007718 1.0e-27 126.7 103 63.1
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 1.3e-27 126.3 103 64.1
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 1.3e-27 126.3 103 64.1
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 1.3e-27 126.3 106 60.4
Cc08_g02050 Coffea canephora HOM05D006197 ORTHO05D007718 1.3e-27 126.3 73 84.9
Gorai.008G229000 Gossypium raimondii HOM05D006197 ORTHO05D007718 1.7e-27 125.9 103 64.1
Oeu014592.2 Olea europaea HOM05D006197 ORTHO05D007718 1.7e-27 125.9 106 63.2
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 2.3e-27 125.6 104 62.5
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 2.3e-27 125.6 104 62.5
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 2.3e-27 125.6 103 63.1
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 2.3e-27 125.6 103 65.0
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 3.0e-27 125.2 103 61.2
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 3.0e-27 125.2 106 63.2
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 3.9e-27 124.8 103 62.1
CANSAT64G2368 Cannabis sativa HOM05D006197 ORTHO05D007718 6.6e-27 124.0 110 59.1
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 6.6e-27 124.0 103 66.0
MELO3C003373.2 Cucumis melo HOM05D006197 ORTHO05D007718 6.6e-27 124.0 103 57.3
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 8.6e-27 123.6 103 65.0
unitig_747.g21291 Utricularia gibba HOM05D006197 ORTHO05D007718 8.6e-27 123.6 103 60.2
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 1.1e-26 123.2 103 64.1
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 1.5e-26 122.9 103 62.1
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 1.5e-26 122.9 103 62.1
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 1.9e-26 122.5 103 64.1
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 1.9e-26 122.5 103 64.1
CARHR170180 Cardamine hirsuta HOM05D006197 ORTHO05D007718 1.9e-26 122.5 103 63.1
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 1.9e-26 122.5 109 62.4
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 2.5e-26 122.1 108 59.3
QL12p007107 Quercus lobata HOM05D006197 ORTHO05D007718 3.3e-26 121.7 106 60.4
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 4.3e-26 121.3 103 63.1
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 4.3e-26 121.3 103 61.2
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 4.3e-26 121.3 103 63.1
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 4.3e-26 121.3 105 61.9
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 4.3e-26 121.3 106 59.4
Gohir.D12G213400 Gossypium hirsutum HOM05D006197 ORTHO05D007718 2.8e-25 118.6 103 61.2
PSO832G1675 Papaver somniferum HOM05D006197 ORTHO05D007718 3.6e-25 118.2 108 62.0
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 6.2e-25 117.5 119 55.5
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 6.2e-25 117.5 107 61.7
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 8.1e-25 117.1 109 62.4
Cc08_g01910 Coffea canephora HOM05D006197 ORTHO05D007718 1.8e-24 115.9 103 60.2
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 6.8e-24 114.0 106 57.5
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 3.4e-23 111.7 103 55.3
ATR1088G052 Amborella trichopoda HOM05D006197 ORTHO05D007718 5.8e-23 110.9 109 56.0
Sc01g0007760 Simmondsia chinensis HOM05D006197 ORTHO05D007718 3.8e-22 108.2 84 67.9
Duzib084G1370 Durio zibethinus HOM05D006197 ORTHO05D007718 4.9e-22 107.8 107 56.1
BolC8t51081H Brassica oleracea HOM05D000403 ORTHO05D004426 1.4e-21 106.3 66 75.8
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 1.9e-21 105.9 64 78.1
Os05g0500450 Oryza sativa ssp. japonica HOM05D006197 ORTHO05D007718 2.7e-20 102.1 105 51.4
CAN.G799.18 Capsicum annuum HOM05D006197 ORTHO05D007718 2.8e-17 92.0 55 81.8
AagrBONN_evm.TU.Sc2ySwM_368.296 Anthoceros agrestis HOM05D006197 ORTHO05D007718 3.6e-17 91.7 54 68.5
Nn1g08520 Nelumbo nucifera HOM05D006197 ORTHO05D007718 4.8e-17 91.3 98 53.1
Mapoly0127s0016 Marchantia polymorpha HOM05D006197 ORTHO05D007718 1.5e-15 86.3 56 64.3
CBR_g8168 Chara braunii HOM05D006197 ORTHO05D007718 1.3e-14 83.2 119 42.0
Migut.E01523 Erythranthe guttata HOM05D006197 ORTHO05D007718 1.3e-14 83.2 134 38.8
Mapoly0046s0110 Marchantia polymorpha HOM05D006197 ORTHO05D007718 2.2e-14 82.4 113 42.5
Migut.E01526 Erythranthe guttata HOM05D006197 ORTHO05D007718 6.4e-14 80.9 71 54.9
Eucgr.C01972 Eucalyptus grandis HOM05D006197 ORTHO05D007718 6.4e-14 80.9 64 56.2
Pp3c14_9970 Physcomitrium patens HOM05D006197 ORTHO05D007718 6.4e-14 80.9 98 44.9
SMO119G0374 Selaginella moellendorffii HOM05D006197 ORTHO05D007718 9.3e-13 77.0 53 69.8
Cc08_g01940 Coffea canephora HOM05D000011 ORTHO05D000157 1.5e-10 69.7 44 70.5
CDE05G1960 Ceratophyllum demersum HOM05D006197 ORTHO05D007718 5.6e-10 67.8 67 53.7


User provided reference genes

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