Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006691g0070 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.7e-81 305.8 141 100.0
Nitab4.5_0009973g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 3.4e-66 255.0 149 83.2
Nitab4.5_0000771g0180 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.2e-33 146.0 121 60.3
Nitab4.5_0006691g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.2e-33 146.0 125 57.6
CAN.G619.36 Capsicum annuum HOM05D006839 ORTHO05D007872 2.9e-33 145.6 116 61.2
PGSC0003DMG400046937 Solanum tuberosum HOM05D006839 ORTHO05D007872 5.0e-33 144.8 123 57.7
PGSC0003DMG400045936 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.4e-32 143.3 116 59.5
Solyc04g026140.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 1.9e-32 142.9 116 59.5
CAN.G619.39 Capsicum annuum HOM05D006839 ORTHO05D007872 7.2e-32 141.0 116 59.5
Peaxi162Scf00681g00001 Petunia axillaris HOM05D006839 ORTHO05D007872 2.7e-31 139.0 119 55.5
PGSC0003DMG400041475 Solanum tuberosum HOM05D006839 ORTHO05D007872 3.0e-30 135.6 113 58.4
CAN.G619.35 Capsicum annuum HOM05D006839 ORTHO05D007872 2.4e-27 125.9 106 56.6
Peaxi162Scf00681g00007 Petunia axillaris HOM05D006839 ORTHO05D007872 2.0e-26 122.9 107 57.0
Nitab4.5_0009973g0030 Nicotiana tabacum HOM05D006839 ORTHO05D007872 6.1e-23 111.3 113 50.4
Nitab4.5_0000771g0190 Nicotiana tabacum HOM05D006839 ORTHO05D007872 5.7e-21 104.8 98 50.0
Sopen09g026780 Solanum pennellii HOM05D006839 ORTHO05D007872 1.3e-20 103.6 107 48.6
Peaxi162Scf00681g00002 Petunia axillaris HOM05D006839 ORTHO05D007872 1.7e-20 103.2 104 48.1
PGSC0003DMG400039700 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.7e-20 103.2 107 47.7
PGSC0003DMG402026866 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.7e-20 103.2 107 47.7
Nitab4.5_0007089g0020 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.2e-20 102.8 128 45.3
Aqoxy2G03292 Aquilegia oxysepala HOM05D006839 ORTHO05D007872 2.8e-20 102.4 105 47.6
Nitab4.5_0001028g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 3.7e-20 102.1 117 45.3
Solyc09g065040.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 6.3e-20 101.3 107 46.7
Oeu022880.1 Olea europaea HOM05D006839 ORTHO05D007872 8.2e-20 100.9 120 44.2
Nn1g02187 Nelumbo nucifera HOM05D006839 ORTHO05D007872 1.4e-19 100.1 118 44.1
MBI19_g14316_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 1.8e-19 99.8 103 47.6
MBI19_g46647_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 1.8e-19 99.8 103 47.6
CsaV3_6G037040 Cucumis sativus L. HOM05D006839 ORTHO05D007872 5.3e-19 98.2 102 45.1
TAR636G2925 Trochodendron aralioides HOM05D006839 ORTHO05D007872 9.1e-19 97.4 124 42.7
Haze_04725 Corylus avellana HOM05D006839 ORTHO05D007872 1.2e-18 97.1 103 43.7
FvH4_2g23730 Fragaria vesca HOM05D006839 ORTHO05D007872 1.5e-18 96.7 113 43.4
RcHm_v2.0_Chr6g0291211 Rosa chinensis HOM05D006839 ORTHO05D007872 1.5e-18 96.7 113 44.2
MELO3C014411.2 Cucumis melo HOM05D006839 ORTHO05D007872 2.6e-18 95.9 102 43.1
VMungo0720G2173 Vigna mungo HOM05D006839 ORTHO05D007872 2.6e-18 95.9 102 44.1
Gorai.007G136000 Gossypium raimondii HOM05D006839 ORTHO05D007872 4.5e-18 95.1 102 44.1
Migut.D00285 Erythranthe guttata HOM05D006839 ORTHO05D007872 5.9e-18 94.7 112 42.9
Manes.05G075300 Manihot esculenta HOM05D006839 ORTHO05D007872 5.9e-18 94.7 103 42.7
TWI59G1109 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 5.9e-18 94.7 114 43.0
Gohir.D11G127300 Gossypium hirsutum HOM05D006839 ORTHO05D007872 7.7e-18 94.4 102 43.1
Gohir.D11G127350 Gossypium hirsutum HOM05D006839 ORTHO05D007872 7.7e-18 94.4 102 43.1
FAN24G3533 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.0e-17 94.0 113 42.5
Gohir.A11G122100 Gossypium hirsutum HOM05D006839 ORTHO05D007872 1.0e-17 94.0 102 42.2
Potri.005G208400 Populus trichocarpa HOM05D006839 ORTHO05D007872 1.0e-17 94.0 111 42.3
PGR083G1544 Punica granatum HOM05D006839 ORTHO05D007872 1.0e-17 94.0 115 44.3
Cpa.g.sc52.24 Carica papaya HOM05D006839 ORTHO05D007872 1.3e-17 93.6 103 41.7
Phvul.007G171000 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 1.3e-17 93.6 102 43.1
ECA248G0593 Erigeron canadensis HOM05D006839 ORTHO05D007872 1.7e-17 93.2 114 43.0
CSS0014698 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 2.9e-17 92.4 114 41.2
CSS0016717 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 2.9e-17 92.4 114 41.2
Glyma.19G155100 Glycine max HOM05D006839 ORTHO05D007872 2.9e-17 92.4 106 43.4
PGR119G0017 Punica granatum HOM05D006839 ORTHO05D007872 2.9e-17 92.4 102 42.2
Eucgr.K03376 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.8e-17 92.0 111 43.2
MD11G1287200 Malus domestica HOM05D006839 ORTHO05D007872 3.8e-17 92.0 111 42.3
Glyma.10G025800 Glycine max HOM05D006839 ORTHO05D007872 6.5e-17 91.3 109 41.3
SalBow4G2140 Salvia bowleyana HOM05D006839 ORTHO05D007872 8.5e-17 90.9 112 44.6
SalBow6G2151 Salvia bowleyana HOM05D006839 ORTHO05D007872 8.5e-17 90.9 101 43.6
Phvul.001G150100 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 1.1e-16 90.5 106 43.4
Hma1.2p1_0257F.1_g103610 Hydrangea macrophylla HOM05D000265 ORTHO05D007872 1.4e-16 90.1 117 40.2
Atru.chr5.1418 Acer truncatum HOM05D006839 ORTHO05D007872 1.9e-16 89.7 102 43.1
Ciclev10023291m.g Citrus clementina HOM05D006839 ORTHO05D007872 1.9e-16 89.7 114 42.1
TWI14G1288 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 1.9e-16 89.7 114 41.2
Prupe.8G242500 Prunus persica HOM05D006839 ORTHO05D007872 2.5e-16 89.4 113 40.7
VMungo1383G1584 Vigna mungo HOM05D006839 ORTHO05D007872 2.5e-16 89.4 106 43.4
COL.COLO4_09110 Corchorus olitorius HOM05D006839 ORTHO05D007872 3.2e-16 89.0 111 42.3
Glyma.02G148000 Glycine max HOM05D006839 ORTHO05D007872 3.2e-16 89.0 109 40.4
ATR0626G183 Amborella trichopoda HOM05D006839 ORTHO05D007872 4.2e-16 88.6 115 40.9
Cc01_g19590 Coffea canephora HOM05D006839 ORTHO05D007872 4.2e-16 88.6 114 42.1
Duzib211G0653 Durio zibethinus HOM05D006839 ORTHO05D007872 7.2e-16 87.8 103 41.7
Migut.N02163 Erythranthe guttata HOM05D006839 ORTHO05D007872 7.2e-16 87.8 113 39.8
Nitab4.5_0000771g0200 Nicotiana tabacum HOM05D006839 ORTHO05D007872 7.2e-16 87.8 100 47.0
Eucgr.A00826 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.2e-15 87.0 102 40.2
SalBow6G4286 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.2e-15 87.0 113 38.9
vmacro14927 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 1.6e-15 86.7 102 41.2
Migut.N02162 Erythranthe guttata HOM05D006839 ORTHO05D007872 2.1e-15 86.3 88 44.3
Lj1g0018770 Lotus japonicus HOM05D006839 ORTHO05D007872 3.6e-15 85.5 103 41.7
SalBow6G6528 Salvia bowleyana HOM05D006839 ORTHO05D007872 3.6e-15 85.5 113 38.9
CiPaw.08G104600 Carya illinoinensis HOM05D006839 ORTHO05D007872 4.7e-15 85.1 103 40.8
QL12p022082 Quercus lobata HOM05D006839 ORTHO05D007872 4.7e-15 85.1 104 41.3
Actinidia24884 Actinidia chinensis HOM05D006839 ORTHO05D007872 7.9e-15 84.3 103 40.8
SalBow6G5378 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.0e-14 84.0 99 38.4
Sed0018644 Sechium edule HOM05D006839 ORTHO05D007872 1.4e-14 83.6 107 39.3
Cfa006129 Carpinus fangiana HOM05D006839 ORTHO05D007872 1.8e-14 83.2 96 40.6
Nitab4.5_0000003g0350 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.3e-14 82.8 118 42.4
FAN20G2906 Fragaria x ananassa HOM05D006839 ORTHO05D007872 3.0e-14 82.4 106 40.6
FAN27G2541 Fragaria x ananassa HOM05D006839 ORTHO05D007872 3.0e-14 82.4 106 40.6
Peaxi162Scf00681g00011 Petunia axillaris HOM05D006839 ORTHO05D007872 3.0e-14 82.4 69 53.6
SEGI_06174 Sequoiadendron giganteum HOM05D006839 ORTHO05D007872 3.0e-14 82.4 107 42.1
Thecc.01G280800 Theobroma cacao HOM05D006839 ORTHO05D007872 5.2e-14 81.6 107 40.2
Medtr7g094760 Medicago truncatula HOM05D006839 ORTHO05D007872 8.8e-14 80.9 105 40.0
Zm00001eb305770 Zea mays HOM05D006839 ORTHO05D007872 8.8e-14 80.9 102 38.2
FAN15G1162 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.1e-13 80.5 106 39.6
Eucgr.L02238 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.0e-13 79.7 102 38.2
SalBow6G0334 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.0e-13 79.7 101 37.6
SalBow7G1292 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.0e-13 79.7 108 39.8
Glyma.03G152600 Glycine max HOM05D006839 ORTHO05D007872 4.4e-13 78.6 117 35.9
Eucgr.H00898 Eucalyptus grandis HOM05D006839 ORTHO05D007872 7.4e-13 77.8 102 39.2
PGR083G0613 Punica granatum HOM05D006839 ORTHO05D007872 1.7e-12 76.6 113 37.2
Eucgr.L02237 Eucalyptus grandis HOM05D006839 ORTHO05D007872 6.3e-12 74.7 102 35.3
SalBow6G6538 Salvia bowleyana HOM05D006839 ORTHO05D007872 6.3e-12 74.7 113 33.6
Eucgr.H01539 Eucalyptus grandis HOM05D006839 ORTHO05D007872 8.2e-12 74.3 108 36.1
Sabra05G0158500 Salix brachista HOM05D006839 ORTHO05D007872 7.0e-11 71.2 104 35.6
Eucgr.J01400 Eucalyptus grandis HOM05D006839 ORTHO05D007872 9.1e-11 70.9 81 34.6
Eucgr.A00847 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.6e-10 70.1 102 37.3
PGR031G2486 Punica granatum HOM05D023640 ORTHO05D019592 2.6e-10 69.3 134 32.8
PGR031G1999 Punica granatum HOM05D006839 ORTHO05D007872 4.5e-10 68.6 132 29.5
HPP92_001336 Vanilla planifolia HOM05D006839 ORTHO05D007872 1.0e-09 67.4 102 36.3
SEGI_28302 Sequoiadendron giganteum HOM05D000022 ORTHO05D000306 1.7e-09 66.6 137 28.5
MBI02_g44172_MAGBIO Magnolia biondii HOM05D000022 ORTHO05D000071 8.5e-09 64.3 146 27.4
SEGI_13509 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 8.5e-09 64.3 133 27.8
SEGI_14968 Sequoiadendron giganteum HOM05D000022 ORTHO05D000306 8.5e-09 64.3 139 27.3
Cc00_g17310 Coffea canephora HOM05D000022 ORTHO05D000071 1.1e-08 63.9 139 28.1
PGR142G4476 Punica granatum HOM05D006839 ORTHO05D007872 1.1e-08 63.9 106 36.8
SEGI_12409 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 1.5e-08 63.5 103 33.0
Zm00001eb291400 Zea mays HOM05D000022 ORTHO05D000071 2.5e-08 62.8 139 25.2
SEGI_03258 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 4.2e-08 62.0 105 32.4
SEGI_08922 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 4.2e-08 62.0 103 33.0
PGR084G0009 Punica granatum HOM05D006839 ORTHO05D007872 5.5e-08 61.6 70 41.4
PGR142G2474 Punica granatum HOM05D006839 ORTHO05D007872 5.5e-08 61.6 70 41.4
SEGI_25560 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 5.5e-08 61.6 102 33.3
Eucgr.A00843 Eucalyptus grandis HOM05D006839 ORTHO05D007872 9.4e-08 60.8 83 34.9
Lsat_1_v5_gn_3_66961 Lactuca sativa HOM05D000022 ORTHO05D002153 9.4e-08 60.8 90 35.6
SEGI_29335 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 1.2e-07 60.5 134 27.6
PGR119G1259 Punica granatum HOM05D006839 ORTHO05D007872 1.6e-07 60.1 101 28.7
SEGI_12542 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 1.6e-07 60.1 140 26.4
SEGI_36721 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 1.6e-07 60.1 140 26.4
SEGI_17215 Sequoiadendron giganteum HOM05D000022 ORTHO05D000306 2.1e-07 59.7 105 32.4
Rhsim13G0158500 Rhododendron simsii HOM05D000022 ORTHO05D000071 2.7e-07 59.3 147 26.5
SEGI_13631 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 2.7e-07 59.3 103 32.0
SEGI_33376 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 2.7e-07 59.3 103 32.0
Medtr3g065370 Medicago truncatula HOM05D000655 ORTHO05D001166 3.6e-07 58.9 114 29.8
SEGI_03650 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 4.7e-07 58.5 141 26.2
SEGI_05914 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 4.7e-07 58.5 141 26.2
Sed0013392 Sechium edule HOM05D000022 ORTHO05D000071 6.1e-07 58.2 141 27.0
SEGI_31021 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 6.1e-07 58.2 88 33.0
SEGI_40091 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 8.0e-07 57.8 140 25.7
Migut.H00718 Erythranthe guttata HOM05D000022 ORTHO05D000306 1.0e-06 57.4 94 35.1
Migut.H00720 Erythranthe guttata HOM05D000022 ORTHO05D000306 1.0e-06 57.4 90 33.3
TPR.G33947 Trifolium pratense HOM05D001838 ORTHO05D000306 1.0e-06 57.4 132 31.1
Glyma.13G305900 Glycine max HOM05D000022 ORTHO05D000306 1.4e-06 57.0 142 27.5
Oeu060323.2 Olea europaea HOM05D000022 ORTHO05D000071 1.4e-06 57.0 59 40.7
SEGI_41265 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 1.4e-06 57.0 89 32.6
Thecc.06G211700 Theobroma cacao HOM05D000022 ORTHO05D000071 1.4e-06 57.0 135 25.2
LjContig00408g0024146 Lotus japonicus HOM05D000022 ORTHO05D000071 1.8e-06 56.6 126 28.6
Sed0021102 Sechium edule HOM05D000022 ORTHO05D000306 1.8e-06 56.6 141 26.2
SEGI_22649 Sequoiadendron giganteum HOM05D000022 ORTHO05D000306 1.8e-06 56.6 101 34.7
SGA_v2.0_scaffold49G18332 Striga asiatica HOM05D000022 ORTHO05D000306 1.8e-06 56.6 142 28.2
AagrBONN_evm.TU.Sc2ySwM_344.366 Anthoceros agrestis HOM05D006839 ORTHO05D007872 2.3e-06 56.2 85 34.1
Aqoxy3G02856 Aquilegia oxysepala HOM05D000022 ORTHO05D000744 2.3e-06 56.2 139 28.8
CANSAT54G2321 Cannabis sativa HOM05D000022 ORTHO05D000071 2.3e-06 56.2 128 27.3
Cfa000671 Carpinus fangiana HOM05D000022 ORTHO05D000306 2.3e-06 56.2 127 29.9
Dinv18536 Davidia involucrata HOM05D000022 ORTHO05D000306 2.3e-06 56.2 96 34.4
Medtr5g068260 Medicago truncatula HOM05D000022 ORTHO05D000071 2.3e-06 56.2 98 31.6
SEGI_33619 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 2.3e-06 56.2 89 32.6
ECA233G4580 Erigeron canadensis HOM05D000655 ORTHO05D001166 3.0e-06 55.8 133 28.6
HanXRQChr12g0363261 Helianthus annuus HOM05D000655 ORTHO05D001166 3.0e-06 55.8 138 30.4
Potri.010G043800 Populus trichocarpa HOM05D000022 ORTHO05D000744 3.0e-06 55.8 88 37.5
SEGI_00178 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 3.0e-06 55.8 105 30.5
SEGI_08792 Sequoiadendron giganteum HOM05D000054 ORTHO05D004590 3.0e-06 55.8 140 25.0
CSS0048814 Camellia sinensis var. sinensis HOM05D000022 ORTHO05D000306 4.0e-06 55.5 127 28.3
CANSAT54G1332 Cannabis sativa HOM05D000022 ORTHO05D000306 4.0e-06 55.5 58 39.7
Cc09_g02550 Coffea canephora HOM05D000022 ORTHO05D000306 4.0e-06 55.5 102 32.4
ECA238G3016 Erigeron canadensis HOM05D000022 ORTHO05D002153 4.0e-06 55.5 91 34.1
Nitab4.5_0001207g0110 Nicotiana tabacum HOM05D000022 ORTHO05D000744 4.0e-06 55.5 81 38.3
Rhsim01G0275200 Rhododendron simsii HOM05D006839 ORTHO05D007872 4.0e-06 55.5 66 39.4
RcHm_v2.0_Chr5g0004141 Rosa chinensis HOM05D000022 ORTHO05D000071 4.0e-06 55.5 136 27.9
Actinidia21107 Actinidia chinensis HOM05D000265 ORTHO05D000161 5.2e-06 55.1 52 50.0
ECA238G1830 Erigeron canadensis HOM05D000022 ORTHO05D002153 5.2e-06 55.1 132 31.1
ECA238G3504 Erigeron canadensis HOM05D000022 ORTHO05D002153 5.2e-06 55.1 91 33.0
Lsat_1_v5_gn_2_71320 Lactuca sativa HOM05D000022 ORTHO05D002153 5.2e-06 55.1 134 30.6
Nitab4.5_0003229g0140 Nicotiana tabacum HOM05D000022 ORTHO05D000744 5.2e-06 55.1 81 37.0
Nitab4.5_0006691g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 5.2e-06 55.1 89 38.2
PSO541G6251 Papaver somniferum HOM05D000022 ORTHO05D000071 5.2e-06 55.1 142 26.1
PSO732G0818 Papaver somniferum HOM05D000022 ORTHO05D000071 5.2e-06 55.1 91 30.8
SEGI_30790 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 5.2e-06 55.1 100 35.0
CARHR252350 Cardamine hirsuta HOM05D000022 ORTHO05D000071 6.7e-06 54.7 128 25.8
Phvul.007G049600 Phaseolus vulgaris HOM05D000022 ORTHO05D000071 6.7e-06 54.7 141 24.8
QL03p059016 Quercus lobata HOM05D000022 ORTHO05D000744 6.7e-06 54.7 85 35.3
SEGI_11720 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 6.7e-06 54.7 103 31.1
CiPaw.05G187300 Carya illinoinensis HOM05D000022 ORTHO05D000744 8.8e-06 54.3 88 36.4
CsaV3_1G011180 Cucumis sativus L. HOM05D000022 ORTHO05D000306 8.8e-06 54.3 146 27.4
SEGI_04494 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 8.8e-06 54.3 89 33.7


User provided reference genes

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