Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006691g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.4e-68 262.7 121 100.0
PGSC0003DMG400046937 Solanum tuberosum HOM05D006839 ORTHO05D007872 2.2e-50 202.2 118 77.1
Nitab4.5_0009973g0030 Nicotiana tabacum HOM05D006839 ORTHO05D007872 5.0e-50 201.1 100 92.0
CAN.G619.39 Capsicum annuum HOM05D006839 ORTHO05D007872 2.5e-41 172.2 118 66.9
CAN.G619.36 Capsicum annuum HOM05D006839 ORTHO05D007872 1.2e-40 169.9 118 66.9
PGSC0003DMG400045936 Solanum tuberosum HOM05D006839 ORTHO05D007872 6.1e-40 167.5 117 65.0
PGSC0003DMG400041475 Solanum tuberosum HOM05D006839 ORTHO05D007872 5.2e-39 164.5 114 66.7
Peaxi162Scf00681g00001 Petunia axillaris HOM05D006839 ORTHO05D007872 4.4e-38 161.4 119 63.0
Nitab4.5_0009973g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 8.3e-37 157.1 99 74.7
Nitab4.5_0000771g0180 Nicotiana tabacum HOM05D006839 ORTHO05D007872 4.1e-36 154.8 121 66.1
Solyc04g026140.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 2.3e-34 149.1 118 59.3
CAN.G619.35 Capsicum annuum HOM05D006839 ORTHO05D007872 1.1e-33 146.7 106 63.2
Nitab4.5_0006691g0070 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.1e-33 146.7 125 57.6
Peaxi162Scf00681g00007 Petunia axillaris HOM05D006839 ORTHO05D007872 4.0e-31 138.3 95 64.2
Peaxi162Scf00681g00002 Petunia axillaris HOM05D006839 ORTHO05D007872 5.2e-31 137.9 109 57.8
Nitab4.5_0000771g0190 Nicotiana tabacum HOM05D006839 ORTHO05D007872 5.7e-30 134.4 95 61.1
Oeu022880.1 Olea europaea HOM05D006839 ORTHO05D007872 2.3e-23 112.5 102 52.0
Aqoxy2G03292 Aquilegia oxysepala HOM05D006839 ORTHO05D007872 1.5e-22 109.8 102 51.0
Sopen09g026780 Solanum pennellii HOM05D006839 ORTHO05D007872 3.4e-22 108.6 104 54.8
Solyc09g065040.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 5.8e-22 107.8 104 53.8
PGSC0003DMG400039700 Solanum tuberosum HOM05D006839 ORTHO05D007872 7.5e-22 107.5 104 53.8
PGSC0003DMG402026866 Solanum tuberosum HOM05D006839 ORTHO05D007872 7.5e-22 107.5 104 53.8
Manes.05G075300 Manihot esculenta HOM05D006839 ORTHO05D007872 1.7e-21 106.3 120 44.2
Migut.N02162 Erythranthe guttata HOM05D006839 ORTHO05D007872 2.9e-21 105.5 100 51.0
SalBow6G2151 Salvia bowleyana HOM05D006839 ORTHO05D007872 3.7e-21 105.1 98 45.9
Haze_04725 Corylus avellana HOM05D006839 ORTHO05D007872 4.9e-21 104.8 100 49.0
Nitab4.5_0000003g0350 Nicotiana tabacum HOM05D006839 ORTHO05D007872 8.3e-21 104.0 119 49.6
Nitab4.5_0001028g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.4e-20 103.2 102 51.0
CSS0014698 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 1.9e-20 102.8 99 49.5
CSS0016717 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 1.9e-20 102.8 99 49.5
RcHm_v2.0_Chr6g0291211 Rosa chinensis HOM05D006839 ORTHO05D007872 2.4e-20 102.4 102 51.0
SalBow4G2140 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.4e-20 102.4 99 50.5
Cc01_g19590 Coffea canephora HOM05D006839 ORTHO05D007872 3.2e-20 102.1 99 47.5
FvH4_2g23730 Fragaria vesca HOM05D006839 ORTHO05D007872 3.2e-20 102.1 102 50.0
MD11G1287200 Malus domestica HOM05D006839 ORTHO05D007872 3.2e-20 102.1 119 43.7
Hma1.2p1_0257F.1_g103610 Hydrangea macrophylla HOM05D000265 ORTHO05D007872 4.1e-20 101.7 99 48.5
Nitab4.5_0007089g0020 Nicotiana tabacum HOM05D006839 ORTHO05D007872 4.1e-20 101.7 106 50.0
Migut.D00285 Erythranthe guttata HOM05D006839 ORTHO05D007872 7.0e-20 100.9 99 47.5
Gorai.007G136000 Gossypium raimondii HOM05D006839 ORTHO05D007872 9.2e-20 100.5 99 48.5
Nn1g02187 Nelumbo nucifera HOM05D006839 ORTHO05D007872 9.2e-20 100.5 116 44.8
vmacro14927 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 1.2e-19 100.1 99 48.5
ECA248G0593 Erigeron canadensis HOM05D006839 ORTHO05D007872 1.6e-19 99.8 99 49.5
Migut.N02163 Erythranthe guttata HOM05D006839 ORTHO05D007872 1.6e-19 99.8 98 45.9
Gohir.D11G127300 Gossypium hirsutum HOM05D006839 ORTHO05D007872 1.6e-19 99.8 99 47.5
Gohir.D11G127350 Gossypium hirsutum HOM05D006839 ORTHO05D007872 1.6e-19 99.8 99 47.5
Potri.005G208400 Populus trichocarpa HOM05D006839 ORTHO05D007872 1.6e-19 99.8 100 47.0
Eucgr.K03376 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.0e-19 99.4 100 48.0
FAN24G3533 Fragaria x ananassa HOM05D006839 ORTHO05D007872 2.0e-19 99.4 102 49.0
Gohir.A11G122100 Gossypium hirsutum HOM05D006839 ORTHO05D007872 2.0e-19 99.4 99 46.5
CsaV3_6G037040 Cucumis sativus L. HOM05D006839 ORTHO05D007872 6.0e-19 97.8 99 48.5
Prupe.8G242500 Prunus persica HOM05D006839 ORTHO05D007872 6.0e-19 97.8 102 48.0
Lsat_1_v5_gn_5_190060 Lactuca sativa HOM05D006839 ORTHO05D007872 7.8e-19 97.4 99 50.5
TWI59G1109 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 1.0e-18 97.1 99 47.5
VMungo0720G2173 Vigna mungo HOM05D006839 ORTHO05D007872 1.0e-18 97.1 99 48.5
PGR119G0017 Punica granatum HOM05D006839 ORTHO05D007872 1.3e-18 96.7 99 46.5
MBI19_g14316_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 1.7e-18 96.3 100 45.0
MBI19_g46647_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 1.7e-18 96.3 100 45.0
SalBow6G6528 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.7e-18 96.3 98 44.9
TAR636G2925 Trochodendron aralioides HOM05D006839 ORTHO05D007872 1.7e-18 96.3 103 46.6
MELO3C014411.2 Cucumis melo HOM05D006839 ORTHO05D007872 3.0e-18 95.5 99 47.5
Glyma.19G155100 Glycine max HOM05D006839 ORTHO05D007872 5.0e-18 94.7 100 49.0
Actinidia24884 Actinidia chinensis HOM05D006839 ORTHO05D007872 6.6e-18 94.4 93 46.2
Nitab4.5_0006691g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.1e-17 93.6 86 55.8
SalBow6G4286 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.5e-17 92.4 99 42.4
SalBow6G5378 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.5e-17 92.4 96 41.7
TWI14G1288 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 2.5e-17 92.4 99 45.5
VMungo1383G1584 Vigna mungo HOM05D006839 ORTHO05D007872 3.3e-17 92.0 100 48.0
SalBow6G0334 Salvia bowleyana HOM05D006839 ORTHO05D007872 4.3e-17 91.7 98 38.8
Phvul.001G150100 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 5.6e-17 91.3 100 48.0
Lj1g0018770 Lotus japonicus HOM05D006839 ORTHO05D007872 7.3e-17 90.9 100 48.0
PGR083G1544 Punica granatum HOM05D006839 ORTHO05D007872 7.3e-17 90.9 103 44.7
ATR0626G183 Amborella trichopoda HOM05D006839 ORTHO05D007872 9.5e-17 90.5 100 46.0
Cfa006129 Carpinus fangiana HOM05D006839 ORTHO05D007872 9.5e-17 90.5 93 46.2
Eucgr.H00898 Eucalyptus grandis HOM05D006839 ORTHO05D007872 9.5e-17 90.5 100 46.0
Nitab4.5_0000771g0200 Nicotiana tabacum HOM05D006839 ORTHO05D007872 9.5e-17 90.5 66 66.7
Sed0018644 Sechium edule HOM05D006839 ORTHO05D007872 1.2e-16 90.1 101 45.5
PGR119G1259 Punica granatum HOM05D006839 ORTHO05D007872 1.6e-16 89.7 100 43.0
Zm00001eb305770 Zea mays HOM05D006839 ORTHO05D007872 2.1e-16 89.4 106 42.5
Medtr7g094760 Medicago truncatula HOM05D006839 ORTHO05D007872 2.8e-16 89.0 95 48.4
CiPaw.08G104600 Carya illinoinensis HOM05D006839 ORTHO05D007872 3.6e-16 88.6 100 43.0
Thecc.01G280800 Theobroma cacao HOM05D006839 ORTHO05D007872 3.6e-16 88.6 92 45.7
FAN20G2906 Fragaria x ananassa HOM05D006839 ORTHO05D007872 4.7e-16 88.2 95 47.4
FAN27G2541 Fragaria x ananassa HOM05D006839 ORTHO05D007872 4.7e-16 88.2 95 47.4
FAN15G1162 Fragaria x ananassa HOM05D006839 ORTHO05D007872 6.2e-16 87.8 95 47.4
Eucgr.A00826 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.1e-15 87.0 100 40.0
Eucgr.L02237 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.4e-15 86.7 100 44.0
Eucgr.L02238 Eucalyptus grandis HOM05D006839 ORTHO05D007872 4.4e-14 81.6 100 40.0
SalBow6G6538 Salvia bowleyana HOM05D006839 ORTHO05D007872 6.4e-13 77.8 98 34.7
Eucgr.H01539 Eucalyptus grandis HOM05D006839 ORTHO05D007872 8.3e-13 77.4 105 34.3
Peaxi162Scf00681g00011 Petunia axillaris HOM05D006839 ORTHO05D007872 1.4e-12 76.6 69 53.6
Sabra05G0158500 Salix brachista HOM05D006839 ORTHO05D007872 1.4e-12 76.6 93 39.8
Glyma.03G152600 Glycine max HOM05D006839 ORTHO05D007872 1.6e-11 73.2 78 47.4
Rhsim01G0275200 Rhododendron simsii HOM05D006839 ORTHO05D007872 2.7e-11 72.4 77 48.1
SMO364G0778 Selaginella moellendorffii HOM05D006839 ORTHO05D007872 6.0e-11 71.2 99 37.4
Eucgr.A00847 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.0e-10 68.9 100 37.0
PGR083G0613 Punica granatum HOM05D006839 ORTHO05D007872 3.3e-09 65.5 100 33.0
AagrBONN_evm.TU.Sc2ySwM_344.1627 Anthoceros agrestis HOM05D032606 ORTHO05D007872 9.5e-09 63.9 130 26.2
PGR031G1999 Punica granatum HOM05D006839 ORTHO05D007872 1.2e-08 63.5 117 31.6
AagrBONN_evm.TU.Sc2ySwM_344.366 Anthoceros agrestis HOM05D006839 ORTHO05D007872 8.1e-08 60.8 98 30.6
Eucgr.L00883 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.1e-07 58.9 62 46.8
TWI38G0054 Tripterygium wilfordii HOM05D000022 ORTHO05D000071 3.1e-07 58.9 80 38.8
PGR084G0009 Punica granatum HOM05D006839 ORTHO05D007872 6.8e-07 57.8 102 28.4
PGR142G2474 Punica granatum HOM05D006839 ORTHO05D007872 6.8e-07 57.8 102 28.4
Thecc.06G211700 Theobroma cacao HOM05D000022 ORTHO05D000071 6.8e-07 57.8 54 46.3
Actinidia21107 Actinidia chinensis HOM05D000265 ORTHO05D000161 8.9e-07 57.4 50 58.0
Manes.01G119300 Manihot esculenta HOM05D000655 ORTHO05D001166 1.2e-06 57.0 99 30.3
Gohir.A06G145500 Gossypium hirsutum HOM05D000022 ORTHO05D000071 1.5e-06 56.6 52 46.2
SEGI_22649 Sequoiadendron giganteum HOM05D000022 ORTHO05D000306 1.5e-06 56.6 103 35.0
AagrBONN_evm.TU.Sc2ySwM_344.1661 Anthoceros agrestis HOM05D058811 ORTHO05D019592 4.4e-06 55.1 98 28.6
PGR142G4476 Punica granatum HOM05D006839 ORTHO05D007872 4.4e-06 55.1 82 37.8
Nn1g06987 Nelumbo nucifera HOM05D000022 ORTHO05D000071 5.8e-06 54.7 52 46.2
SEGI_30790 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 9.9e-06 53.9 103 35.0


User provided reference genes

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