Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006682g0010 Nicotiana tabacum HOM05D007560 ORTHO05D005947 2.7e-61 238.4 114 100.0
Nitab4.5_0001058g0060 Nicotiana tabacum HOM05D007560 ORTHO05D005947 8.6e-52 206.8 107 89.7
Nitab4.5_0006682g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.1e-51 206.5 107 88.8
Peaxi162Scf00058g00156 Petunia axillaris HOM05D007560 ORTHO05D005947 9.9e-32 140.2 106 67.0
Nitab4.5_0000464g0140 Nicotiana tabacum HOM05D007560 ORTHO05D005947 2.9e-31 138.7 97 68.0
Peaxi162Scf00153g00103 Petunia axillaris HOM05D007560 ORTHO05D005947 4.9e-31 137.9 107 64.5
Nitab4.5_0009316g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.0e-28 130.2 71 87.3
Peaxi162Scf00191g01113 Petunia axillaris HOM05D007560 ORTHO05D005947 6.2e-26 120.9 104 60.6
Peaxi162Scf00738g00116 Petunia axillaris HOM05D007560 ORTHO05D005947 6.2e-26 120.9 104 60.6
Peaxi162Scf00738g00002 Petunia axillaris HOM05D007560 ORTHO05D005947 5.8e-24 114.4 95 58.9
Nitab4.5_0021475g0010 Nicotiana tabacum HOM05D007560 ORTHO05D005947 5.4e-22 107.8 107 57.0
Nitab4.5_0001737g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.0e-20 103.6 106 53.8
Nitab4.5_0001634g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.3e-20 103.2 90 61.1
Nitab4.5_0009688g0030 Nicotiana tabacum HOM05D007560 ORTHO05D005947 6.6e-20 100.9 112 54.5
Peaxi162Scf00408g00045 Petunia axillaris HOM05D007560 ORTHO05D005947 1.9e-19 99.4 125 48.0
CAN.G135.62 Capsicum annuum HOM05D007560 ORTHO05D005947 9.6e-19 97.1 106 55.7
CAN.G135.61 Capsicum annuum HOM05D007560 ORTHO05D005947 2.4e-17 92.4 104 55.8
Peaxi162Scf00598g00085 Petunia axillaris HOM05D007560 ORTHO05D005947 5.1e-12 74.7 98 41.8
Solyc04g082080.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 9.6e-11 70.5 93 45.2
Solyc11g007620.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 2.1e-10 69.3 93 47.3
Lj6C390T13 Lonicera japonica HOM05D007560 ORTHO05D005947 8.1e-10 67.4 100 40.0
Peaxi162Scf00005g02517 Petunia axillaris HOM05D002907 ORTHO05D005554 8.1e-10 67.4 47 70.2
Nitab4.5_0009688g0040 Nicotiana tabacum HOM05D007560 ORTHO05D005947 2.4e-09 65.9 72 54.2
Lj8C356T1 Lonicera japonica HOM05D007560 ORTHO05D005947 4.0e-09 65.1 78 44.9
Lj8P356T28 Lonicera japonica HOM05D007560 ORTHO05D005947 4.0e-09 65.1 78 44.9
PGSC0003DMG400027318 Solanum tuberosum HOM05D007560 ORTHO05D005947 5.3e-09 64.7 97 47.4
Lj8C38T12 Lonicera japonica HOM05D007560 ORTHO05D005947 9.0e-09 63.9 96 38.5
Lj6C626T9 Lonicera japonica HOM05D007560 ORTHO05D005947 9.9e-08 60.5 78 43.6
Lj5C338T12 Lonicera japonica HOM05D007560 ORTHO05D005947 1.3e-07 60.1 78 41.0
Rhsim11G0104000 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.7e-07 59.7 84 39.3
Rhsim11G0104100 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.7e-07 59.7 84 39.3
Lj5C338T9 Lonicera japonica HOM05D007560 ORTHO05D005947 2.2e-07 59.3 87 40.2
Lj5P358T14 Lonicera japonica HOM05D007560 ORTHO05D005947 2.2e-07 59.3 84 40.5
Rhsim11G0103500 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.2e-07 59.3 84 39.3
HanXRQChr08g0209381 Helianthus annuus HOM05D000007 ORTHO05D000521 2.9e-07 58.9 67 44.8
Lj5C321T2 Lonicera japonica HOM05D007560 ORTHO05D005947 2.9e-07 58.9 75 41.3
Rhsim11G0104400 Rhododendron simsii HOM05D007560 ORTHO05D005947 3.8e-07 58.5 84 36.9
Lj5C320G6 Lonicera japonica HOM05D007560 ORTHO05D005947 4.9e-07 58.2 88 39.8
SalBow7G3915 Salvia bowleyana HOM05D000007 ORTHO05D000521 6.4e-07 57.8 67 43.3
SalBow7G1034 Salvia bowleyana HOM05D000007 ORTHO05D000017 1.4e-06 56.6 75 40.0
Sabra10G0160200 Salix brachista HOM05D000007 ORTHO05D000039 1.9e-06 56.2 54 50.0
Potri.010G207500 Populus trichocarpa HOM05D000007 ORTHO05D000039 2.4e-06 55.8 57 47.4
Lj5C336T6 Lonicera japonica HOM05D007560 ORTHO05D005947 4.2e-06 55.1 88 39.8
HanXRQChr10g0295591 Helianthus annuus HOM05D000007 ORTHO05D000521 7.1e-06 54.3 53 49.1
CAN.G464.45 Capsicum annuum HOM05D000007 ORTHO05D000039 9.3e-06 53.9 69 42.0


User provided reference genes

Program Settings