Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006659g0010 Nicotiana tabacum HOM05D005423 ORTHO05D006223 2.8e-150 535.4 305 100.0
Nitab4.5_0004015g0040 Nicotiana tabacum HOM05D005423 ORTHO05D006223 1.7e-110 403.3 224 93.3
PGSC0003DMG400025363 Solanum tuberosum HOM05D005423 ORTHO05D006223 1.1e-69 267.7 292 57.5
Sopen11g030350 Solanum pennellii HOM05D005423 ORTHO05D006223 2.3e-67 260.0 270 57.8
Solyc11g072680.1 Solanum lycopersicum HOM05D005423 ORTHO05D006223 3.9e-67 259.2 220 63.2
CAN.G84.20 Capsicum annuum HOM05D005423 ORTHO05D006223 3.4e-63 246.1 228 61.8
SGA_v2.0_scaffold1G00298 Striga asiatica HOM05D005423 ORTHO05D006223 6.9e-48 195.3 150 64.7
Migut.M01932 Erythranthe guttata HOM05D005423 ORTHO05D006223 1.1e-45 188.0 168 55.4
Lj1P1155T48 Lonicera japonica HOM05D005423 ORTHO05D006223 3.6e-44 183.0 160 55.6
TAR636G0950 Trochodendron aralioides HOM05D005423 ORTHO05D006223 1.5e-42 177.6 158 54.4
Hma1.2p1_0410F.1_g147050 Hydrangea macrophylla HOM05D005423 ORTHO05D006223 6.3e-41 172.2 163 55.2
Rhsim13G0126500 Rhododendron simsii HOM05D005423 ORTHO05D006223 1.1e-40 171.4 167 60.5
Lsat_1_v5_gn_1_91741 Lactuca sativa HOM05D005423 ORTHO05D006223 1.8e-40 170.6 176 49.4
Duzib160G0446 Durio zibethinus HOM05D005423 ORTHO05D006223 6.9e-40 168.7 145 55.9
HanXRQChr01g0020631 Helianthus annuus HOM05D005423 ORTHO05D006223 1.2e-39 167.9 178 50.6
Thecc.06G005400 Theobroma cacao HOM05D005423 ORTHO05D006223 2.0e-39 167.2 151 54.3
FvH4_3g11440 Fragaria vesca HOM05D005423 ORTHO05D006223 2.6e-39 166.8 147 57.1
Cfa000754 Carpinus fangiana HOM05D005423 ORTHO05D006223 4.5e-39 166.0 160 54.4
FAN16G1003 Fragaria x ananassa HOM05D005423 ORTHO05D006223 5.0e-38 162.5 147 55.1
Manes.03G066900 Manihot esculenta HOM05D005423 ORTHO05D006223 5.0e-38 162.5 151 55.6
MD00G1097400 Malus domestica HOM05D005423 ORTHO05D006223 2.5e-37 160.2 214 43.9
Potri.001G440800 Populus trichocarpa HOM05D005423 ORTHO05D006223 7.2e-37 158.7 171 48.0
EL10Ac5g10610 Beta vulgaris HOM05D005423 ORTHO05D006223 1.2e-36 157.9 170 44.1
Aqoxy2G01436 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 1.6e-36 157.5 156 50.0
CANSAT35G1706 Cannabis sativa HOM05D005423 ORTHO05D006223 1.6e-36 157.5 163 50.3
CiPaw.09G149100 Carya illinoinensis HOM05D005423 ORTHO05D006223 2.1e-36 157.1 160 53.1
Gohir.D02G104700 Gossypium hirsutum HOM05D005423 ORTHO05D006223 3.6e-36 156.4 153 49.7
Gorai.005G118900 Gossypium raimondii HOM05D005423 ORTHO05D006223 3.6e-36 156.4 153 49.7
Prupe.4G102300 Prunus persica HOM05D005423 ORTHO05D006223 6.1e-36 155.6 138 53.6
QL05p063092 Quercus lobata HOM05D005423 ORTHO05D006223 1.0e-35 154.8 138 55.8
Atru.chr10.659 Acer truncatum HOM05D005423 ORTHO05D006223 1.4e-35 154.5 148 53.4
Gohir.A02G088801 Gossypium hirsutum HOM05D005423 ORTHO05D006223 2.3e-35 153.7 153 48.4
AUR62028667 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.1e-34 151.4 154 46.8
TWI38G0231 Tripterygium wilfordii HOM05D005423 ORTHO05D006223 1.1e-34 151.4 162 45.7
Sc04g0008360 Simmondsia chinensis HOM05D005423 ORTHO05D006223 2.0e-34 150.6 135 55.6
Ah.02g124440 Amaranthus hybridus HOM05D005423 ORTHO05D006223 3.3e-34 149.8 157 46.5
AUR62028668 Chenopodium quinoa HOM05D005423 ORTHO05D006223 2.8e-33 146.7 149 47.7
Ciclev10017493m.g Citrus clementina HOM05D005423 ORTHO05D006223 2.8e-33 146.7 155 49.0
AUR62008092 Chenopodium quinoa HOM05D005423 ORTHO05D006223 4.8e-33 146.0 156 46.2
AUR62008091 Chenopodium quinoa HOM05D005423 ORTHO05D006223 2.4e-32 143.7 149 48.3
MBI19_g30013_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 2.4e-32 143.7 140 52.1
AUR62008089 Chenopodium quinoa HOM05D005423 ORTHO05D006223 6.5e-30 135.6 154 46.8
PSO782G2497 Papaver somniferum HOM05D005423 ORTHO05D006223 8.5e-30 135.2 140 45.0
COL.COLO4_26869 Corchorus olitorius HOM05D005423 ORTHO05D006223 3.2e-29 133.3 140 49.3
Carub.0006s3088 Capsella rubella HOM05D005423 ORTHO05D006223 2.1e-28 130.6 203 38.9
Psat1g018720 Pisum sativum HOM05D005423 ORTHO05D006223 2.1e-28 130.6 154 48.7
EL10Ac5g10640 Beta vulgaris HOM05D005423 ORTHO05D006223 1.4e-27 127.9 162 38.9
Glyma.15G191500 Glycine max HOM05D005423 ORTHO05D006223 1.4e-27 127.9 146 46.6
Oeu063151.1 Olea europaea HOM05D005423 ORTHO05D006223 1.4e-27 127.9 93 65.6
Sc21g0002200 Simmondsia chinensis HOM05D005423 ORTHO05D006223 1.4e-27 127.9 138 49.3
Ca_02385_v3 Cicer arietinum L. HOM05D005423 ORTHO05D006223 1.8e-27 127.5 140 47.9
Sabra16G0300100 Salix brachista HOM05D005423 ORTHO05D006223 1.8e-27 127.5 114 52.6
AL1G44970 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 2.3e-27 127.1 143 46.9
EL10Ac5g10674 Beta vulgaris HOM05D005423 ORTHO05D006223 3.0e-27 126.7 161 39.1
Haze_05969 Corylus avellana HOM05D005423 ORTHO05D006223 3.0e-27 126.7 132 50.8
Sabra16G0298100 Salix brachista HOM05D005423 ORTHO05D006223 3.9e-27 126.3 114 51.8
A08p11040 Brassica napus HOM05D005423 ORTHO05D006223 8.8e-27 125.2 142 47.9
BcaC07g37806 Brassica carinata HOM05D005423 ORTHO05D006223 1.1e-26 124.8 142 47.2
BolC8t48195H Brassica oleracea HOM05D005423 ORTHO05D006223 1.1e-26 124.8 142 47.2
Carub.0001s2910 Capsella rubella HOM05D005423 ORTHO05D006223 1.1e-26 124.8 142 47.9
Sc21g0002210 Simmondsia chinensis HOM05D005423 ORTHO05D006223 1.1e-26 124.8 138 47.8
Lj6g0018842 Lotus japonicus HOM05D005423 ORTHO05D006223 2.0e-26 124.0 143 46.2
BcaB04g18206 Brassica carinata HOM05D005423 ORTHO05D006223 2.6e-26 123.6 142 47.2
BraA08t33095Z Brassica rapa HOM05D005423 ORTHO05D006223 2.6e-26 123.6 142 47.2
Aa31LG6G12020 Aethionema arabicum HOM05D005423 ORTHO05D006223 7.4e-26 122.1 147 47.6
Oeu000496.1 Olea europaea HOM05D005423 ORTHO05D006223 7.4e-26 122.1 92 63.0
AT1G30800 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 1.3e-25 121.3 145 45.5
Sp1g26680 Schrenkiella parvula HOM05D005423 ORTHO05D006223 1.3e-25 121.3 144 47.2
Lalb_Chr11g0073251 Lupinus albus HOM05D005423 ORTHO05D006223 2.2e-25 120.6 149 44.3
CARHR030270 Cardamine hirsuta HOM05D005423 ORTHO05D006223 3.7e-25 119.8 140 46.4
C08p24310 Brassica napus HOM05D005423 ORTHO05D006223 4.8e-25 119.4 138 45.7
Thhalv10009325m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 4.8e-25 119.4 145 45.5
FAN25G0767 Fragaria x ananassa HOM05D005423 ORTHO05D006223 6.3e-25 119.0 102 57.8
BcaB01g00727 Brassica carinata HOM05D005423 ORTHO05D006223 8.2e-25 118.6 137 46.0
BolC8t50049H Brassica oleracea HOM05D005423 ORTHO05D006223 1.1e-24 118.2 138 45.7
CDE04G0856 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 1.4e-24 117.9 137 44.5
FAN21G0600 Fragaria x ananassa HOM05D005423 ORTHO05D006223 1.4e-24 117.9 90 62.2
MBI19_g33491_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 1.4e-24 117.9 129 49.6
BcaC07g39399 Brassica carinata HOM05D005423 ORTHO05D006223 4.1e-24 116.3 138 44.9
A06p18470 Brassica napus HOM05D005423 ORTHO05D006223 5.3e-24 115.9 138 44.9
TPR.G22906 Trifolium pratense HOM05D005423 ORTHO05D006223 5.3e-24 115.9 155 42.6
THA.LOC104814335 Tarenaya hassleriana HOM05D005423 ORTHO05D006223 7.0e-24 115.5 139 45.3
CDE04G2898 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 2.0e-23 114.0 164 38.4
Medtr2g047120 Medicago truncatula HOM05D005423 ORTHO05D006223 5.9e-23 112.5 150 43.3
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 1.6e-20 104.4 174 37.4
Duzib043G0004 Durio zibethinus HOM05D005423 ORTHO05D006223 6.1e-20 102.4 143 42.0
PSO210G3101 Papaver somniferum HOM05D005423 ORTHO05D006223 6.1e-20 102.4 146 37.7
AUR62007135 Chenopodium quinoa HOM05D005423 ORTHO05D006223 8.0e-20 102.1 115 45.2
Potri.011G155150 Populus trichocarpa HOM05D005423 ORTHO05D006223 1.4e-19 101.3 96 47.9
FAN23G0143 Fragaria x ananassa HOM05D005423 ORTHO05D006223 3.0e-19 100.1 93 52.7
FvH4_5g18240 Fragaria vesca HOM05D005423 ORTHO05D006223 1.5e-18 97.8 97 51.5
FvH4_1g24910 Fragaria vesca HOM05D005423 ORTHO05D006223 2.6e-18 97.1 96 52.1
Phvul.009G218400 Phaseolus vulgaris HOM05D005423 ORTHO05D006223 2.6e-18 97.1 101 50.5
CARHR237890 Cardamine hirsuta HOM05D005423 ORTHO05D006223 9.7e-18 95.1 142 35.9
FAN18G3875 Fragaria x ananassa HOM05D005423 ORTHO05D006223 9.7e-18 95.1 97 50.5
FvH4_5g21920 Fragaria vesca HOM05D005423 ORTHO05D006223 2.2e-17 94.0 98 49.0
Sp7g27780 Schrenkiella parvula HOM05D005423 ORTHO05D006223 4.8e-17 92.8 139 35.3
Thhalv10026388m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 8.2e-17 92.0 146 34.9
A03p59360 Brassica napus HOM05D005423 ORTHO05D006223 3.1e-16 90.1 147 32.0
BraA03t14993Z Brassica rapa HOM05D005423 ORTHO05D006223 3.1e-16 90.1 147 32.0
C07p57390 Brassica napus HOM05D005423 ORTHO05D006223 5.3e-16 89.4 147 32.0
BolC7t46208H Brassica oleracea HOM05D005423 ORTHO05D006223 5.3e-16 89.4 147 32.0
AT4G12950 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 4.5e-15 86.3 141 36.2
BcaNung00507 Brassica carinata HOM05D005423 ORTHO05D006223 1.3e-14 84.7 147 31.3
AL7G22260 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 1.7e-14 84.3 142 33.8
Mapoly0033s0033 Marchantia polymorpha HOM05D005423 ORTHO05D006223 2.2e-14 84.0 160 31.9
AT4G29980 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 2.9e-14 83.6 146 32.2
Carub.0007s1066 Capsella rubella HOM05D005423 ORTHO05D006223 6.5e-14 82.4 141 31.9
Thhalv10027436m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 1.9e-13 80.9 148 33.1
Aqoxy7G03258 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 4.2e-13 79.7 76 51.3
DCAR_001448 Daucus carota HOM05D005423 ORTHO05D006223 8.0e-12 75.5 145 35.2
A03p59580 Brassica napus HOM05D005423 ORTHO05D006223 5.2e-11 72.8 141 34.8
FvH4_6g29350 Fragaria vesca HOM05D005423 ORTHO05D006223 5.2e-11 72.8 69 55.1
Sp7g28070 Schrenkiella parvula HOM05D005423 ORTHO05D006223 8.8e-11 72.0 141 32.6
BcaC07g40588 Brassica carinata HOM05D005423 ORTHO05D006223 1.5e-10 71.2 63 52.4
BraA03t15014Z Brassica rapa HOM05D005423 ORTHO05D006223 1.5e-10 71.2 141 34.0
FAN11G1050 Fragaria x ananassa HOM05D005423 ORTHO05D006223 4.4e-10 69.7 73 52.1
FAN03G0475 Fragaria x ananassa HOM05D005423 ORTHO05D006223 5.7e-10 69.3 67 55.2
FAN14G5542 Fragaria x ananassa HOM05D005423 ORTHO05D006223 5.7e-10 69.3 67 55.2
FAN18G0575 Fragaria x ananassa HOM05D005423 ORTHO05D006223 7.5e-10 68.9 72 51.4
AL7G23570 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 8.3e-09 65.5 138 34.1
CARHR238100 Cardamine hirsuta HOM05D005423 ORTHO05D006223 8.3e-09 65.5 75 45.3
BcaC09g50401 Brassica carinata HOM05D005423 ORTHO05D006223 1.1e-08 65.1 59 52.5
TAR624G0561 Trochodendron aralioides HOM05D005305 ORTHO05D006394 1.1e-08 65.1 142 30.3
Lj6g0026147 Lotus japonicus HOM05D003663 ORTHO05D005327 1.4e-08 64.7 120 32.5
Nn5g28774 Nelumbo nucifera HOM05D005305 ORTHO05D006394 1.4e-08 64.7 192 28.6
TPR.G10569 Trifolium pratense HOM05D003663 ORTHO05D005327 9.1e-08 62.0 120 31.7
A09p38220 Brassica napus HOM05D005423 ORTHO05D006223 1.2e-07 61.6 51 58.8
AL7G23530 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 1.6e-07 61.2 77 37.7
Ca_00744_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 1.6e-07 61.2 132 31.8
DCAR_002955 Daucus carota HOM05D005423 ORTHO05D006223 2.7e-07 60.5 77 41.6
Pp3c1_4130 Physcomitrium patens HOM05D022662 ORTHO05D006223 2.7e-07 60.5 157 28.7
SMO290G0002 Selaginella moellendorffii HOM05D005423 ORTHO05D006223 3.5e-07 60.1 161 29.8
arahy.Tifrunner.gnm1.ann1.5NF29Y Arachis hypogaea HOM05D003663 ORTHO05D005327 4.5e-07 59.7 120 30.8
arahy.Tifrunner.gnm1.ann1.CR9YGF Arachis hypogaea HOM05D003663 ORTHO05D005327 4.5e-07 59.7 120 30.8
Mapoly0095s0061 Marchantia polymorpha HOM05D005423 ORTHO05D006223 4.5e-07 59.7 170 31.2
Nitab4.5_0009996g0030 Nicotiana tabacum HOM05D007205 ORTHO05D009175 4.5e-07 59.7 73 34.2
Pp3c13_8280 Physcomitrium patens HOM05D022662 ORTHO05D006223 4.5e-07 59.7 155 28.4
Ah.03g133360 Amaranthus hybridus HOM05D005305 ORTHO05D006394 5.9e-07 59.3 126 30.2
Psat1g178200 Pisum sativum HOM05D003663 ORTHO05D005327 1.0e-06 58.5 132 31.1
Potri.006G016700 Populus trichocarpa HOM05D003663 ORTHO05D005327 1.0e-06 58.5 98 29.6
Nn1g06067 Nelumbo nucifera HOM05D005305 ORTHO05D006394 1.3e-06 58.2 179 27.4
EL10Ac6g13873 Beta vulgaris HOM05D005305 ORTHO05D006394 1.7e-06 57.8 106 31.1
CSS0002540 Camellia sinensis var. sinensis HOM05D007205 ORTHO05D009175 1.7e-06 57.8 69 31.9
Ciclev10001162m.g Citrus clementina HOM05D005305 ORTHO05D006394 1.7e-06 57.8 142 32.4
Oeu035198.1 Olea europaea HOM05D005305 ORTHO05D006394 1.7e-06 57.8 154 29.2
Lalb_Chr20g0119391 Lupinus albus HOM05D003663 ORTHO05D005327 2.3e-06 57.4 99 32.3
Nn1g03229 Nelumbo nucifera HOM05D003663 ORTHO05D005327 3.8e-06 56.6 99 30.3
CSS0043111 Camellia sinensis var. sinensis HOM05D005305 ORTHO05D006394 5.0e-06 56.2 232 25.0
DCAR_010543 Daucus carota HOM05D003663 ORTHO05D005327 5.0e-06 56.2 138 26.1
Hma1.2p1_2614F.1_g325410 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 5.0e-06 56.2 133 25.6
DCAR_019203 Daucus carota HOM05D007205 ORTHO05D009175 6.5e-06 55.8 84 32.1
Pp3c6_3400 Physcomitrium patens HOM05D005423 ORTHO05D006223 6.5e-06 55.8 156 25.0
Cfa016035 Carpinus fangiana HOM05D003663 ORTHO05D005327 8.6e-06 55.5 174 29.3
Sc12g0002500 Simmondsia chinensis HOM05D007205 ORTHO05D009175 8.6e-06 55.5 78 30.8


User provided reference genes

Program Settings