Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006654g0010 Nicotiana tabacum HOM05D007532 ORTHO05D009483 1.5e-119 433.0 231 100.0
Nitab4.5_0000020g0210 Nicotiana tabacum HOM05D007532 ORTHO05D009483 4.4e-111 404.8 231 94.8
Oeu045039.1 Olea europaea HOM05D007532 ORTHO05D009483 1.7e-35 153.7 238 49.6
Oeu035652.1 Olea europaea HOM05D007532 ORTHO05D009483 4.0e-32 142.5 224 43.8
DCAR_020715 Daucus carota HOM05D007532 ORTHO05D009483 5.8e-31 138.7 221 45.7
Dinv31750 Davidia involucrata HOM05D010118 ORTHO05D009483 4.9e-30 135.6 214 46.7
Oeu055526.1 Olea europaea HOM05D007532 ORTHO05D009483 7.9e-28 128.3 227 43.2
TAR623G0884 Trochodendron aralioides HOM05D007532 ORTHO05D009483 2.3e-27 126.7 225 40.4
Actinidia32050 Actinidia chinensis HOM05D007532 ORTHO05D009483 1.3e-25 120.9 226 42.5
Lsat_1_v5_gn_2_55700 Lactuca sativa HOM05D007532 ORTHO05D009483 4.8e-25 119.0 223 40.8
Cfa016678 Carpinus fangiana HOM05D007532 ORTHO05D009483 8.4e-22 108.2 225 40.9
Haze_19695 Corylus avellana HOM05D007532 ORTHO05D009483 3.2e-21 106.3 225 40.9
PGR004G2296 Punica granatum HOM05D007532 ORTHO05D009483 9.3e-21 104.8 238 35.7
Migut.L01834 Erythranthe guttata HOM05D007532 ORTHO05D009483 1.2e-20 104.4 238 37.0
Cpa.g.sc104.49 Carica papaya HOM05D007532 ORTHO05D009483 7.9e-20 101.7 236 36.4
SalBow5G5402 Salvia bowleyana HOM05D007532 ORTHO05D009483 1.0e-19 101.3 227 37.4
Rhsim03G0066200 Rhododendron simsii HOM05D007532 ORTHO05D009483 2.3e-19 100.1 212 40.6
Lsat_1_v5_gn_1_57140 Lactuca sativa HOM05D007532 ORTHO05D009483 6.7e-19 98.6 220 39.5
Potri.016G071700 Populus trichocarpa HOM05D007532 ORTHO05D009483 1.5e-18 97.4 237 37.1
MSTRG.10404 Avicennia marina HOM05D007532 ORTHO05D009483 3.3e-18 96.3 233 37.8
Lj1C1049T4 Lonicera japonica HOM05D007532 ORTHO05D009483 3.3e-18 96.3 161 42.2
GSVIVG01033946001 Vitis vinifera HOM05D007532 ORTHO05D009483 7.4e-18 95.1 225 34.7
Manes.09G046800 Manihot esculenta HOM05D007532 ORTHO05D009483 9.6e-18 94.7 226 34.5
Atru.chr8.1383 Acer truncatum HOM05D007532 ORTHO05D009483 1.6e-17 94.0 226 35.4
Actinidia04004 Actinidia chinensis HOM05D007532 ORTHO05D009483 2.1e-17 93.6 206 38.3
CiPaw.10G016200 Carya illinoinensis HOM05D007532 ORTHO05D009483 1.8e-16 90.5 222 36.5
COL.COLO4_29593 Corchorus olitorius HOM05D007532 ORTHO05D009483 1.8e-16 90.5 226 34.1
Duzib093G1477 Durio zibethinus HOM05D007532 ORTHO05D009483 1.8e-16 90.5 230 35.2
Thecc.05G102000 Theobroma cacao HOM05D007532 ORTHO05D009483 4.0e-16 89.4 231 35.5
Sabra06G0157400 Salix brachista HOM05D007532 ORTHO05D009483 5.3e-16 89.0 231 35.5
QL07p037073 Quercus lobata HOM05D007532 ORTHO05D009483 1.2e-15 87.8 231 35.1
RcHm_v2.0_Chr3g0475571 Rosa chinensis HOM05D007532 ORTHO05D009483 2.0e-15 87.0 230 34.8
Potri.006G204400 Populus trichocarpa HOM05D007532 ORTHO05D009483 2.6e-15 86.7 230 34.8
TWI74G0748 Tripterygium wilfordii HOM05D007532 ORTHO05D009483 5.8e-15 85.5 220 34.1
FvH4_6g20110 Fragaria vesca HOM05D007532 ORTHO05D009483 1.7e-14 84.0 228 34.2
FAN14G5580 Fragaria x ananassa HOM05D007532 ORTHO05D009483 1.7e-14 84.0 228 34.2
Gorai.006G150300 Gossypium raimondii HOM05D007532 ORTHO05D009483 1.7e-14 84.0 228 37.3
Gohir.D09G131700 Gossypium hirsutum HOM05D007532 ORTHO05D009483 3.8e-14 82.8 228 36.4
CANSAT64G0088 Cannabis sativa HOM05D007532 ORTHO05D009483 6.5e-14 82.0 222 32.9
Aqoxy1G00693 Aquilegia oxysepala HOM05D007532 ORTHO05D009483 1.4e-13 80.9 210 33.8
Gohir.A09G135100 Gossypium hirsutum HOM05D007532 ORTHO05D009483 1.9e-13 80.5 228 35.5
FAN05G0427 Fragaria x ananassa HOM05D007532 ORTHO05D009483 7.1e-13 78.6 228 32.9
Lj5g0000288 Lotus japonicus HOM05D007532 ORTHO05D009483 2.1e-12 77.0 226 32.3
Nn6g34736 Nelumbo nucifera HOM05D007532 ORTHO05D009483 1.0e-11 74.7 223 32.3
Manes.08G032400 Manihot esculenta HOM05D007532 ORTHO05D009483 1.1e-10 71.2 222 28.8
Sc20g0006700 Simmondsia chinensis HOM05D007532 ORTHO05D009483 1.1e-10 71.2 198 36.9
TWI77G0050 Tripterygium wilfordii HOM05D007532 ORTHO05D009483 1.5e-10 70.9 210 31.0
SGA_v2.0_scaffold35G14004 Striga asiatica HOM05D007532 ORTHO05D009483 2.5e-10 70.1 181 37.0
Ciclev10012763m.g Citrus clementina HOM05D007532 ORTHO05D009483 4.3e-10 69.3 173 32.4
arahy.Tifrunner.gnm1.ann1.R0B094 Arachis hypogaea HOM05D007532 ORTHO05D009483 1.3e-09 67.8 226 30.5
arahy.Tifrunner.gnm1.ann1.U8RNVP Arachis hypogaea HOM05D007532 ORTHO05D009483 1.3e-09 67.8 226 30.5
PSO339G0695 Papaver somniferum HOM05D007532 ORTHO05D009483 4.8e-09 65.9 224 31.7
Sabra16G0072100 Salix brachista HOM05D007532 ORTHO05D009483 6.3e-09 65.5 231 35.5
Eucgr.A02598 Eucalyptus grandis HOM05D007532 ORTHO05D009483 8.2e-09 65.1 125 40.8
AL5G33190 Arabidopsis lyrata HOM05D007532 ORTHO05D009483 1.1e-08 64.7 222 31.5
C08p27760 Brassica napus HOM05D007532 ORTHO05D009483 1.1e-08 64.7 226 30.1
Phvul.007G269000 Phaseolus vulgaris HOM05D007532 ORTHO05D009483 1.1e-08 64.7 223 31.4
BcaC07g39613 Brassica carinata HOM05D007532 ORTHO05D009483 1.8e-08 63.9 226 28.3
BolC8t50392H Brassica oleracea HOM05D007532 ORTHO05D009483 1.8e-08 63.9 226 28.3
MBI17_g22147_MAGBIO Magnolia biondii HOM05D007532 ORTHO05D009483 1.8e-08 63.9 238 31.9
BcaB01g00362 Brassica carinata HOM05D007532 ORTHO05D009483 5.3e-08 62.4 224 31.2
ECA238G0408 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.3e-08 62.4 208 30.8
Lsat_1_v5_gn_2_119741 Lactuca sativa HOM05D002150 ORTHO05D002191 6.9e-08 62.0 229 30.1
Lalb_Chr02g0154541 Lupinus albus HOM05D007532 ORTHO05D009483 6.9e-08 62.0 139 36.7
TAR369G0649 Trochodendron aralioides HOM05D002150 ORTHO05D002191 9.0e-08 61.6 240 29.2
AT3G52480 Arabidopsis thaliana HOM05D007532 ORTHO05D009483 1.2e-07 61.2 222 30.6
A09p45610 Brassica napus HOM05D007532 ORTHO05D009483 1.2e-07 61.2 222 30.2
BraA09t40022Z Brassica rapa HOM05D007532 ORTHO05D009483 1.2e-07 61.2 222 30.2
Duzib106G1076 Durio zibethinus HOM05D007532 ORTHO05D009483 1.2e-07 61.2 228 30.3
Sabra16G0073900 Salix brachista HOM05D007532 ORTHO05D009483 1.2e-07 61.2 231 32.5
Gohir.D04G094900 Gossypium hirsutum HOM05D007532 ORTHO05D009483 1.5e-07 60.8 229 31.0
Gorai.009G397600 Gossypium raimondii HOM05D007532 ORTHO05D009483 1.5e-07 60.8 229 31.0
PSO384G2238 Papaver somniferum HOM05D007532 ORTHO05D009483 1.5e-07 60.8 225 31.6
Carub.0005s1887 Capsella rubella HOM05D007532 ORTHO05D009483 2.0e-07 60.5 228 30.7
AUR62037048 Chenopodium quinoa HOM05D007532 ORTHO05D009483 2.0e-07 60.5 227 28.2
Ca_11714_v3 Cicer arietinum L. HOM05D007532 ORTHO05D009483 2.0e-07 60.5 224 32.1
Nn2g14270 Nelumbo nucifera HOM05D007532 ORTHO05D009483 2.0e-07 60.5 117 38.5
TPR.G31864 Trifolium pratense HOM05D007532 ORTHO05D009483 2.6e-07 60.1 224 29.9
CARHR162250 Cardamine hirsuta HOM05D007532 ORTHO05D009483 3.4e-07 59.7 222 27.5
Ciclev10032119m.g Citrus clementina HOM05D002150 ORTHO05D002191 5.9e-07 58.9 248 25.8
HanXRQChr14g0458181 Helianthus annuus HOM05D002150 ORTHO05D002191 5.9e-07 58.9 151 32.5
CSS0006598 Camellia sinensis var. sinensis HOM05D002150 ORTHO05D002191 1.3e-06 57.8 239 27.2
CSS0034701 Camellia sinensis var. sinensis HOM05D002150 ORTHO05D002191 1.3e-06 57.8 239 27.2
Thhalv10010711m.g Eutrema salsugineum HOM05D007532 ORTHO05D009483 1.7e-06 57.4 222 29.3
Aqoxy4G02951 Aquilegia oxysepala HOM05D002150 ORTHO05D002191 2.9e-06 56.6 234 29.5
AUR62006278 Chenopodium quinoa HOM05D007532 ORTHO05D009483 2.9e-06 56.6 224 29.5
DCAR_016921 Daucus carota HOM05D007532 ORTHO05D009483 2.9e-06 56.6 221 31.2
FAN01G1666 Fragaria x ananassa HOM05D002150 ORTHO05D002191 2.9e-06 56.6 249 27.7
MD11G1111600 Malus domestica HOM05D002150 ORTHO05D002191 2.9e-06 56.6 186 33.9
Rhsim09G0165300 Rhododendron simsii HOM05D002150 ORTHO05D002191 2.9e-06 56.6 146 37.0
MD14G1037100 Malus domestica HOM05D007532 ORTHO05D009483 3.8e-06 56.2 226 29.6
CAN.G1013.11 Capsicum annuum HOM05D002150 ORTHO05D002191 5.0e-06 55.8 234 26.9
TWI38G0694 Tripterygium wilfordii HOM05D002150 ORTHO05D002191 5.0e-06 55.8 244 27.5
ClCG02G020280 Citrullus lanatus HOM05D002150 ORTHO05D002191 6.5e-06 55.5 200 32.0
MELO3C009524.2 Cucumis melo HOM05D007532 ORTHO05D009483 6.5e-06 55.5 231 27.7
ATR0559G086 Amborella trichopoda HOM05D002150 ORTHO05D002191 8.5e-06 55.1 240 29.6
FvH4_7g22100 Fragaria vesca HOM05D002150 ORTHO05D002191 8.5e-06 55.1 249 27.7
FAN01G1088 Fragaria x ananassa HOM05D002150 ORTHO05D002191 8.5e-06 55.1 249 27.7
FAN06G3415 Fragaria x ananassa HOM05D002150 ORTHO05D002191 8.5e-06 55.1 249 27.7
Sed0027687 Sechium edule HOM05D002150 ORTHO05D002191 8.5e-06 55.1 147 34.7


User provided reference genes

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